RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 NHSQ6T4R5 1651 aa24.59■■□□□ 1.53
CTNS-204ENST00000452111 TATP17735 454 aaPredicted RBP24.59■■□□□ 1.53
CTNS-204ENST00000452111 RGPD3A6NKT7 1758 aaPredicted RBP24.59■■□□□ 1.53
CTNS-204ENST00000452111 RGPD4Q7Z3J3 1758 aa24.59■■□□□ 1.53
CTNS-204ENST00000452111 ANKRD26Q9UPS8 1709 aa24.58■■□□□ 1.53
CTNS-204ENST00000452111 PROM2Q8N271 834 aa24.58■■□□□ 1.53
CTNS-204ENST00000452111 TXNRD1Q16881 649 aa24.57■■□□□ 1.52
CTNS-204ENST00000452111 MORC1Q86VD1 984 aa24.57■■□□□ 1.52
CTNS-204ENST00000452111 ANO8Q9HCE9 1232 aaPredicted RBP24.56■■□□□ 1.52
CTNS-204ENST00000452111 SYTL4Q96C24 671 aaPredicted RBP24.55■■□□□ 1.52
CTNS-204ENST00000452111 EYA1Q99502 592 aa24.54■■□□□ 1.52
CTNS-204ENST00000452111 EIF4A2Q14240 407 aaKnown RBP24.53■■□□□ 1.52
CTNS-204ENST00000452111 MAP2P11137 1827 aaKnown RBP24.53■■□□□ 1.52
CTNS-204ENST00000452111 SHANK3Q9BYB0 1731 aa24.52■■□□□ 1.52
CTNS-204ENST00000452111 PRIM1P49642 420 aaKnown RBP24.52■■□□□ 1.52
CTNS-204ENST00000452111 AMER1Q5JTC6 1135 aaPredicted RBP24.52■■□□□ 1.52
CTNS-204ENST00000452111 LRP5O75197 1615 aa24.52■■□□□ 1.52
CTNS-204ENST00000452111 NCAPD2Q15021 1401 aa24.52■■□□□ 1.52
CTNS-204ENST00000452111 PCDH11XQ9BZA7 1347 aa24.51■■□□□ 1.51
CTNS-204ENST00000452111 PCDH11YQ9BZA8 1340 aa24.51■■□□□ 1.51
CTNS-204ENST00000452111 BTAF1O14981 1849 aa24.49■■□□□ 1.51
CTNS-204ENST00000452111 DOT1LQ8TEK3 1739 aa24.47■■□□□ 1.51
CTNS-204ENST00000452111 CYP27B1O15528 508 aa24.47■■□□□ 1.51
CTNS-204ENST00000452111 STK32BQ9NY57 414 aa24.47■■□□□ 1.51
CTNS-204ENST00000452111 KAT6BQ8WYB5 2073 aa24.46■■□□□ 1.51
CTNS-204ENST00000452111 PER1O15534 1290 aaPredicted RBP24.45■■□□□ 1.5
CTNS-204ENST00000452111 CC2D1BQ5T0F9 858 aaKnown RBP24.45■■□□□ 1.5
CTNS-204ENST00000452111 SPG7Q9UQ90 795 aa24.44■■□□□ 1.5
CTNS-204ENST00000452111 IGSF1Q8N6C5 1336 aa24.43■■□□□ 1.5
CTNS-204ENST00000452111 SLC15A2Q16348 729 aa24.43■■□□□ 1.5
CTNS-204ENST00000452111 LRRC4BQ9NT99 713 aa24.43■■□□□ 1.5
CTNS-204ENST00000452111 CNGB1Q14028 1251 aaPredicted RBP24.42■■□□□ 1.5
CTNS-204ENST00000452111 PDGFDQ9GZP0 370 aaPredicted RBP24.42■■□□□ 1.5
CTNS-204ENST00000452111 PKD1L3Q7Z443 1732 aa24.41■■□□□ 1.5
CTNS-204ENST00000452111 KCNQ4P56696 695 aa24.39■■□□□ 1.49
CTNS-204ENST00000452111 SLC27A3Q5K4L6 730 aa24.39■■□□□ 1.49
CTNS-204ENST00000452111 SPON1Q9HCB6 807 aa24.39■■□□□ 1.49
CTNS-204ENST00000452111 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.39■■□□□ 1.49
CTNS-204ENST00000452111 ZNF827Q17R98 1081 aa24.38■■□□□ 1.49
CTNS-204ENST00000452111 MPRIPQ6WCQ1 1025 aa24.38■■□□□ 1.49
CTNS-204ENST00000452111 PAPPAQ13219 1627 aa24.38■■□□□ 1.49
CTNS-204ENST00000452111 ZBTB7AO95365 584 aa24.36■■□□□ 1.49
CTNS-204ENST00000452111 MTHFSP49914 203 aa24.36■■□□□ 1.49
CTNS-204ENST00000452111 NKX1-1Q15270 411 aaPredicted RBP24.36■■□□□ 1.49
CTNS-204ENST00000452111 AEBP1Q8IUX7 1158 aa24.36■■□□□ 1.49
CTNS-204ENST00000452111 PHKG2P15735 406 aa24.35■■□□□ 1.49
CTNS-204ENST00000452111 IL13P35225 146 aa24.35■■□□□ 1.49
CTNS-204ENST00000452111 IFNL2Q8IZJ0 200 aa24.35■■□□□ 1.49
CTNS-204ENST00000452111 CCNL1Q9UK58 526 aaPredicted RBP24.35■■□□□ 1.49
CTNS-204ENST00000452111 CASZ1Q86V15 1759 aa24.34■■□□□ 1.49
CTNS-204ENST00000452111 TOGARAM1Q9Y4F4 1720 aa24.33■■□□□ 1.49
CTNS-204ENST00000452111 NPC1L1Q9UHC9 1359 aa24.33■■□□□ 1.49
CTNS-204ENST00000452111 SULT6B1Q6IMI4 303 aa24.33■■□□□ 1.49
CTNS-204ENST00000452111 PALLDQ8WX93 1383 aa24.32■■□□□ 1.48
CTNS-204ENST00000452111 PLEKHG2Q9H7P9 1386 aa24.32■■□□□ 1.48
CTNS-204ENST00000452111 AKT1S1Q96B36 256 aa24.32■■□□□ 1.48
CTNS-204ENST00000452111 PPP1R1BQ9UD71 204 aaPredicted RBP24.32■■□□□ 1.48
CTNS-204ENST00000452111 PLEKHO1Q53GL0 409 aaPredicted RBP24.31■■□□□ 1.48
CTNS-204ENST00000452111 PIGBQ92521 554 aa24.31■■□□□ 1.48
CTNS-204ENST00000452111 ATF5Q9Y2D1 282 aaPredicted RBP24.31■■□□□ 1.48
CTNS-204ENST00000452111 ZNF530Q6P9A1 599 aaPredicted RBP24.29■■□□□ 1.48
CTNS-204ENST00000452111 TMOD3Q9NYL9 352 aa24.29■■□□□ 1.48
CTNS-204ENST00000452111 LY75O60449 1722 aa24.29■■□□□ 1.48
CTNS-204ENST00000452111 AMOTQ4VCS5 1084 aa24.28■■□□□ 1.48
CTNS-204ENST00000452111 TFCP2L1Q9NZI6 479 aa24.28■■□□□ 1.48
CTNS-204ENST00000452111 KDRP35968 1356 aa24.28■■□□□ 1.48
CTNS-204ENST00000452111 SMARCC1Q92922 1105 aaPredicted RBP24.27■■□□□ 1.48
CTNS-204ENST00000452111 MTFR1LQ9H019 292 aa24.27■■□□□ 1.48
CTNS-204ENST00000452111 DIAPH1O60610 1272 aaKnown RBP24.26■■□□□ 1.47
CTNS-204ENST00000452111 HMOX1P09601 288 aa24.25■■□□□ 1.47
CTNS-204ENST00000452111 PTGER2P43116 358 aa24.25■■□□□ 1.47
CTNS-204ENST00000452111 PNPLA7Q6ZV29 1317 aa24.25■■□□□ 1.47
CTNS-204ENST00000452111 HSP90AB1P08238 724 aaKnown RBP24.24■■□□□ 1.47
CTNS-204ENST00000452111 C1orf141Q5JVX7 400 aa24.24■■□□□ 1.47
CTNS-204ENST00000452111 DCAF5Q96JK2 942 aa24.24■■□□□ 1.47
CTNS-204ENST00000452111 ITGB4P16144 1822 aa24.24■■□□□ 1.47
CTNS-204ENST00000452111 ASAP1Q9ULH1 1129 aa24.23■■□□□ 1.47
CTNS-204ENST00000452111 KDM6AO15550 1401 aaPredicted RBP24.21■■□□□ 1.47
CTNS-204ENST00000452111 COL3A1P02461 1466 aaPredicted RBP24.2■■□□□ 1.47
CTNS-204ENST00000452111 ERVV-2B6SEH9 535 aa24.2■■□□□ 1.46
CTNS-204ENST00000452111 LOC102724428A0A0B4J2F2 783 aa24.19■■□□□ 1.46
CTNS-204ENST00000452111 SIK1P57059 783 aa24.19■■□□□ 1.46
CTNS-204ENST00000452111 ATG3Q9NT62 314 aa24.19■■□□□ 1.46
CTNS-204ENST00000452111 U2SURPO15042 1029 aaKnown RBP24.18■■□□□ 1.46
CTNS-204ENST00000452111 CABP4P57796 275 aa24.18■■□□□ 1.46
CTNS-204ENST00000452111 SGIP1Q9BQI5 828 aa24.18■■□□□ 1.46
CTNS-204ENST00000452111 MSH5O43196 834 aa24.17■■□□□ 1.46
CTNS-204ENST00000452111 C5P01031 1676 aa24.17■■□□□ 1.46
CTNS-204ENST00000452111 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
CTNS-204ENST00000452111 SLC16A10Q8TF71 515 aa24.16■■□□□ 1.46
CTNS-204ENST00000452111 TUBGCP6Q96RT7 1819 aa24.15■■□□□ 1.46
CTNS-204ENST00000452111 COL23A1Q86Y22 540 aaPredicted RBP24.15■■□□□ 1.46
CTNS-204ENST00000452111 AK7Q96M32 723 aa24.15■■□□□ 1.46
CTNS-204ENST00000452111 QSER1Q2KHR3 1735 aa24.15■■□□□ 1.46
CTNS-204ENST00000452111 PPP2R1AP30153 589 aa24.14■■□□□ 1.45
CTNS-204ENST00000452111 ATP6V1AP38606 617 aa24.14■■□□□ 1.45
CTNS-204ENST00000452111 AKAP4Q5JQC9 854 aa24.14■■□□□ 1.45
CTNS-204ENST00000452111 LINC00116Q8NCU8 138 aa24.14■■□□□ 1.45
CTNS-204ENST00000452111 CFAP53Q96M91 514 aa24.14■■□□□ 1.45
CTNS-204ENST00000452111 ITPK1Q13572 414 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms