RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
SMPD4-212ENST00000451542 PLEKHG2Q9H7P9 1386 aa16.23■□□□□ 0.19
SMPD4-212ENST00000451542 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
SMPD4-212ENST00000451542 DDX10Q13206 875 aaKnown RBP16.22■□□□□ 0.19
SMPD4-212ENST00000451542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMPD4-212ENST00000451542 MEGF6O75095 1541 aa16.22■□□□□ 0.19
SMPD4-212ENST00000451542 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.19
SMPD4-212ENST00000451542 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
SMPD4-212ENST00000451542 EN1Q05925 392 aaPredicted RBP16.21■□□□□ 0.19
SMPD4-212ENST00000451542 SBF2Q86WG5 1849 aa16.2■□□□□ 0.18
SMPD4-212ENST00000451542 TNS1Q9HBL0 1735 aaKnown RBP16.19■□□□□ 0.18
SMPD4-212ENST00000451542 IL13P35225 146 aa16.19■□□□□ 0.18
SMPD4-212ENST00000451542 AMOTQ4VCS5 1084 aa16.19■□□□□ 0.18
SMPD4-212ENST00000451542 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
SMPD4-212ENST00000451542 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
SMPD4-212ENST00000451542 PLSCR1O15162 318 aa16.18■□□□□ 0.18
SMPD4-212ENST00000451542 SULT6B1Q6IMI4 303 aa16.18■□□□□ 0.18
SMPD4-212ENST00000451542 ACSBG1Q96GR2 724 aa16.18■□□□□ 0.18
SMPD4-212ENST00000451542 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
SMPD4-212ENST00000451542 RALBP1Q15311 655 aa16.17■□□□□ 0.18
SMPD4-212ENST00000451542 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
SMPD4-212ENST00000451542 SYTL4Q96C24 671 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-212ENST00000451542 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
SMPD4-212ENST00000451542 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
SMPD4-212ENST00000451542 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
SMPD4-212ENST00000451542 NHSQ6T4R5 1651 aa16.15■□□□□ 0.18
SMPD4-212ENST00000451542 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-212ENST00000451542 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
SMPD4-212ENST00000451542 HMGB2P26583 209 aaKnown RBP16.15■□□□□ 0.18
SMPD4-212ENST00000451542 EZH2Q15910 746 aaKnown RBP16.15■□□□□ 0.18
SMPD4-212ENST00000451542 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
SMPD4-212ENST00000451542 KCNQ2O43526 872 aa16.14■□□□□ 0.17
SMPD4-212ENST00000451542 C1orf141Q5JVX7 400 aa16.14■□□□□ 0.17
SMPD4-212ENST00000451542 KDRP35968 1356 aa16.13■□□□□ 0.17
SMPD4-212ENST00000451542 EP400Q96L91 3159 aa16.13■□□□□ 0.17
SMPD4-212ENST00000451542 CYP27B1O15528 508 aa16.13■□□□□ 0.17
SMPD4-212ENST00000451542 PRIM1P49642 420 aaKnown RBP16.13■□□□□ 0.17
SMPD4-212ENST00000451542 RGPD3A6NKT7 1758 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-212ENST00000451542 RGPD4Q7Z3J3 1758 aa16.13■□□□□ 0.17
SMPD4-212ENST00000451542 SHANK3Q9BYB0 1731 aa16.12■□□□□ 0.17
SMPD4-212ENST00000451542 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-212ENST00000451542 AEBP1Q8IUX7 1158 aa16.12■□□□□ 0.17
SMPD4-212ENST00000451542 HMOX1P09601 288 aa16.11■□□□□ 0.17
SMPD4-212ENST00000451542 PHKG2P15735 406 aa16.11■□□□□ 0.17
SMPD4-212ENST00000451542 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-212ENST00000451542 NEFMP07197 916 aa16.1■□□□□ 0.17
SMPD4-212ENST00000451542 DOT1LQ8TEK3 1739 aa16.1■□□□□ 0.17
SMPD4-212ENST00000451542 TXNRD1Q16881 649 aa16.09■□□□□ 0.17
SMPD4-212ENST00000451542 PTF1AQ7RTS3 328 aa16.09■□□□□ 0.17
SMPD4-212ENST00000451542 DCAF5Q96JK2 942 aa16.09■□□□□ 0.17
SMPD4-212ENST00000451542 BTAF1O14981 1849 aa16.09■□□□□ 0.17
SMPD4-212ENST00000451542 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-212ENST00000451542 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMPD4-212ENST00000451542 SLC27A3Q5K4L6 730 aa16.08■□□□□ 0.16
SMPD4-212ENST00000451542 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.16
SMPD4-212ENST00000451542 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-212ENST00000451542 TMOD3Q9NYL9 352 aa16.08■□□□□ 0.16
SMPD4-212ENST00000451542 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-212ENST00000451542 PNNQ9H307 717 aaKnown RBP16.07■□□□□ 0.16
SMPD4-212ENST00000451542 MYBBP1AQ9BQG0 1328 aaKnown RBP16.07■□□□□ 0.16
SMPD4-212ENST00000451542 RREB1Q92766 1687 aa16.06■□□□□ 0.16
SMPD4-212ENST00000451542 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
SMPD4-212ENST00000451542 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
SMPD4-212ENST00000451542 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
SMPD4-212ENST00000451542 FCHSD2O94868 740 aa16.05■□□□□ 0.16
SMPD4-212ENST00000451542 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
SMPD4-212ENST00000451542 CABP4P57796 275 aa16.04■□□□□ 0.16
SMPD4-212ENST00000451542 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
SMPD4-212ENST00000451542 NUP188Q5SRE5 1749 aa16.03■□□□□ 0.16
SMPD4-212ENST00000451542 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
SMPD4-212ENST00000451542 ITGB4P16144 1822 aa16.03■□□□□ 0.16
SMPD4-212ENST00000451542 PSDA5PKW4 1024 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-212ENST00000451542 PROM2Q8N271 834 aa16.02■□□□□ 0.16
SMPD4-212ENST00000451542 PIGBQ92521 554 aa16.02■□□□□ 0.16
SMPD4-212ENST00000451542 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-212ENST00000451542 CCNL1Q9UK58 526 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-212ENST00000451542 MTHFSDQ2M296 383 aaKnown RBP16.01■□□□□ 0.15
SMPD4-212ENST00000451542 PALLDQ8WX93 1383 aa16■□□□□ 0.15
SMPD4-212ENST00000451542 GNAT3A8MTJ3 354 aa16■□□□□ 0.15
SMPD4-212ENST00000451542 RSPH6AQ9H0K4 717 aa16■□□□□ 0.15
SMPD4-212ENST00000451542 TOGARAM1Q9Y4F4 1720 aa15.99■□□□□ 0.15
SMPD4-212ENST00000451542 ANP32CO43423 234 aa15.99■□□□□ 0.15
SMPD4-212ENST00000451542 SLC15A2Q16348 729 aa15.99■□□□□ 0.15
SMPD4-212ENST00000451542 MAPK8IP3Q9UPT6 1336 aa15.98■□□□□ 0.15
SMPD4-212ENST00000451542 LY75O60449 1722 aa15.98■□□□□ 0.15
SMPD4-212ENST00000451542 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.15
SMPD4-212ENST00000451542 RTF1Q92541 710 aaKnown RBP15.98■□□□□ 0.15
SMPD4-212ENST00000451542 KDM6AO15550 1401 aaPredicted RBP15.97■□□□□ 0.15
SMPD4-212ENST00000451542 RNMTO43148 476 aaKnown RBP15.97■□□□□ 0.15
SMPD4-212ENST00000451542 TEFQ10587 303 aa15.97■□□□□ 0.15
SMPD4-212ENST00000451542 NFATC2IPQ8NCF5 419 aa15.97■□□□□ 0.15
SMPD4-212ENST00000451542 MAP3K5Q99683 1374 aa15.97■□□□□ 0.15
SMPD4-212ENST00000451542 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
SMPD4-212ENST00000451542 SLC52A2Q9HAB3 445 aa15.96■□□□□ 0.15
SMPD4-212ENST00000451542 LRRC4BQ9NT99 713 aa15.96■□□□□ 0.15
SMPD4-212ENST00000451542 LOC102724428A0A0B4J2F2 783 aa15.95■□□□□ 0.14
SMPD4-212ENST00000451542 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
SMPD4-212ENST00000451542 SIK1P57059 783 aa15.95■□□□□ 0.14
SMPD4-212ENST00000451542 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
SMPD4-212ENST00000451542 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms