RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 RGPD2P0DJD1 1756 aa22.88■■□□□ 1.25
RPUSD3-209ENST00000451405 NBPF6Q5VWK0 638 aa22.85■■□□□ 1.25
RPUSD3-209ENST00000451405 CCER1Q8TC90 406 aaPredicted RBP22.85■■□□□ 1.25
RPUSD3-209ENST00000451405 DDX54Q8TDD1 881 aaKnown RBP22.85■■□□□ 1.25
RPUSD3-209ENST00000451405 NBPF4Q96M43 638 aa22.85■■□□□ 1.25
RPUSD3-209ENST00000451405 POLD1P28340 1107 aa22.84■■□□□ 1.25
RPUSD3-209ENST00000451405 FAM208AQ9UK61 1670 aaKnown RBP22.84■■□□□ 1.25
RPUSD3-209ENST00000451405 MAP3K5Q99683 1374 aa22.83■■□□□ 1.25
RPUSD3-209ENST00000451405 NHSQ6T4R5 1651 aa22.83■■□□□ 1.24
RPUSD3-209ENST00000451405 KIF20BQ96Q89 1820 aa22.82■■□□□ 1.24
RPUSD3-209ENST00000451405 KAT6BQ8WYB5 2073 aa22.82■■□□□ 1.24
RPUSD3-209ENST00000451405 HSP90AB2PQ58FF8 381 aa22.82■■□□□ 1.24
RPUSD3-209ENST00000451405 NSD3Q9BZ95 1437 aa22.82■■□□□ 1.24
RPUSD3-209ENST00000451405 RTL1A6NKG5 1358 aa22.81■■□□□ 1.24
RPUSD3-209ENST00000451405 USHBP1Q8N6Y0 703 aa22.81■■□□□ 1.24
RPUSD3-209ENST00000451405 CHD4Q14839 1912 aa22.8■■□□□ 1.24
RPUSD3-209ENST00000451405 HSPA5P11021 654 aaKnown RBP22.8■■□□□ 1.24
RPUSD3-209ENST00000451405 POLR3GLQ9BT43 218 aa22.8■■□□□ 1.24
RPUSD3-209ENST00000451405 ZNF827Q17R98 1081 aa22.79■■□□□ 1.24
RPUSD3-209ENST00000451405 ZCRB1Q8TBF4 217 aaKnown RBP22.79■■□□□ 1.24
RPUSD3-209ENST00000451405 SLC16A10Q8TF71 515 aa22.79■■□□□ 1.24
RPUSD3-209ENST00000451405 MEGF6O75095 1541 aa22.78■■□□□ 1.24
RPUSD3-209ENST00000451405 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
RPUSD3-209ENST00000451405 BTAF1O14981 1849 aa22.78■■□□□ 1.24
RPUSD3-209ENST00000451405 EIF4G2P78344 907 aaKnown RBP eCLIP22.77■■□□□ 1.24
RPUSD3-209ENST00000451405 INSRP06213 1382 aa22.76■■□□□ 1.23
RPUSD3-209ENST00000451405 LRRC4BQ9NT99 713 aa22.76■■□□□ 1.23
RPUSD3-209ENST00000451405 PRIM1P49642 420 aaKnown RBP22.75■■□□□ 1.23
RPUSD3-209ENST00000451405 TFCP2L1Q9NZI6 479 aa22.75■■□□□ 1.23
RPUSD3-209ENST00000451405 FLT4P35916 1363 aa22.75■■□□□ 1.23
RPUSD3-209ENST00000451405 SHANK3Q9BYB0 1731 aa22.74■■□□□ 1.23
RPUSD3-209ENST00000451405 SLC27A3Q5K4L6 730 aa22.73■■□□□ 1.23
RPUSD3-209ENST00000451405 KIF24Q5T7B8 1368 aa22.73■■□□□ 1.23
RPUSD3-209ENST00000451405 PPM1GO15355 546 aaPredicted RBP22.72■■□□□ 1.23
RPUSD3-209ENST00000451405 GRIN3BO60391 1043 aa22.72■■□□□ 1.23
RPUSD3-209ENST00000451405 AKT1S1Q96B36 256 aa22.72■■□□□ 1.23
RPUSD3-209ENST00000451405 SYTL4Q96C24 671 aaPredicted RBP22.72■■□□□ 1.23
RPUSD3-209ENST00000451405 RAPGEF4Q8WZA2 1011 aa22.71■■□□□ 1.23
RPUSD3-209ENST00000451405 CGNL1Q0VF96 1302 aa22.71■■□□□ 1.23
RPUSD3-209ENST00000451405 SMG6Q86US8 1419 aaKnown RBP22.71■■□□□ 1.23
RPUSD3-209ENST00000451405 TATP17735 454 aaPredicted RBP22.7■■□□□ 1.22
RPUSD3-209ENST00000451405 NSD2O96028 1365 aa22.69■■□□□ 1.22
RPUSD3-209ENST00000451405 MSH5O43196 834 aa22.69■■□□□ 1.22
RPUSD3-209ENST00000451405 KCNQ4P56696 695 aa22.69■■□□□ 1.22
RPUSD3-209ENST00000451405 NLGN2Q8NFZ4 835 aa22.69■■□□□ 1.22
RPUSD3-209ENST00000451405 PANK3Q9H999 370 aa22.69■■□□□ 1.22
RPUSD3-209ENST00000451405 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
RPUSD3-209ENST00000451405 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
RPUSD3-209ENST00000451405 POLKQ9UBT6 870 aa22.68■■□□□ 1.22
RPUSD3-209ENST00000451405 DOT1LQ8TEK3 1739 aa22.68■■□□□ 1.22
RPUSD3-209ENST00000451405 WASHC2AQ641Q2 1341 aa22.67■■□□□ 1.22
RPUSD3-209ENST00000451405 PNPLA7Q6ZV29 1317 aa22.67■■□□□ 1.22
RPUSD3-209ENST00000451405 CEP350Q5VT06 3117 aa22.67■■□□□ 1.22
RPUSD3-209ENST00000451405 TNNT2P45379 298 aaPredicted RBP22.66■■□□□ 1.22
RPUSD3-209ENST00000451405 CYP27B1O15528 508 aa22.64■■□□□ 1.21
RPUSD3-209ENST00000451405 EYA1Q99502 592 aa22.64■■□□□ 1.21
RPUSD3-209ENST00000451405 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
RPUSD3-209ENST00000451405 GOLGB1Q14789 3259 aaKnown RBP22.62■■□□□ 1.21
RPUSD3-209ENST00000451405 YBX3P16989 372 aaKnown RBP eCLIP22.62■■□□□ 1.21
RPUSD3-209ENST00000451405 PCDH11XQ9BZA7 1347 aa22.61■■□□□ 1.21
RPUSD3-209ENST00000451405 PCDH11YQ9BZA8 1340 aa22.61■■□□□ 1.21
RPUSD3-209ENST00000451405 NCAPD2Q15021 1401 aa22.61■■□□□ 1.21
RPUSD3-209ENST00000451405 LY75O60449 1722 aa22.6■■□□□ 1.21
RPUSD3-209ENST00000451405 GPBP1L1Q9HC44 474 aaPredicted RBP22.6■■□□□ 1.21
RPUSD3-209ENST00000451405 EIF4A2Q14240 407 aaKnown RBP22.59■■□□□ 1.21
RPUSD3-209ENST00000451405 CCNL1Q9UK58 526 aaPredicted RBP22.59■■□□□ 1.21
RPUSD3-209ENST00000451405 MPRIPQ6WCQ1 1025 aa22.57■■□□□ 1.2
RPUSD3-209ENST00000451405 ATP10DQ9P241 1426 aa22.56■■□□□ 1.2
RPUSD3-209ENST00000451405 PKD1L3Q7Z443 1732 aa22.55■■□□□ 1.2
RPUSD3-209ENST00000451405 MSL1Q68DK7 614 aa22.55■■□□□ 1.2
RPUSD3-209ENST00000451405 ZNF526Q8TF50 670 aaPredicted RBP22.55■■□□□ 1.2
RPUSD3-209ENST00000451405 SPG7Q9UQ90 795 aa22.55■■□□□ 1.2
RPUSD3-209ENST00000451405 NKX1-1Q15270 411 aaPredicted RBP22.54■■□□□ 1.2
RPUSD3-209ENST00000451405 COL23A1Q86Y22 540 aaPredicted RBP22.54■■□□□ 1.2
RPUSD3-209ENST00000451405 TOGARAM1Q9Y4F4 1720 aa22.54■■□□□ 1.2
RPUSD3-209ENST00000451405 TUBGCP6Q96RT7 1819 aa22.53■■□□□ 1.2
RPUSD3-209ENST00000451405 HSPA6P17066 643 aa22.53■■□□□ 1.2
RPUSD3-209ENST00000451405 ITGB4P16144 1822 aa22.52■■□□□ 1.2
RPUSD3-209ENST00000451405 MORC1Q86VD1 984 aa22.52■■□□□ 1.2
RPUSD3-209ENST00000451405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.52■■□□□ 1.2
RPUSD3-209ENST00000451405 CD2APQ9Y5K6 639 aa22.52■■□□□ 1.2
RPUSD3-209ENST00000451405 KIF7Q2M1P5 1343 aa22.52■■□□□ 1.2
RPUSD3-209ENST00000451405 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
RPUSD3-209ENST00000451405 PIGBQ92521 554 aa22.51■■□□□ 1.19
RPUSD3-209ENST00000451405 HMGB2P26583 209 aaKnown RBP22.5■■□□□ 1.19
RPUSD3-209ENST00000451405 KNSTRNQ9Y448 316 aa22.5■■□□□ 1.19
RPUSD3-209ENST00000451405 PHKG2P15735 406 aa22.49■■□□□ 1.19
RPUSD3-209ENST00000451405 IGSF1Q8N6C5 1336 aa22.49■■□□□ 1.19
RPUSD3-209ENST00000451405 PALLDQ8WX93 1383 aa22.49■■□□□ 1.19
RPUSD3-209ENST00000451405 IFNL2Q8IZJ0 200 aa22.48■■□□□ 1.19
RPUSD3-209ENST00000451405 FLAD1Q8NFF5 587 aa22.48■■□□□ 1.19
RPUSD3-209ENST00000451405 AMER1Q5JTC6 1135 aaPredicted RBP22.47■■□□□ 1.19
RPUSD3-209ENST00000451405 SMARCC1Q92922 1105 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-209ENST00000451405 PER1O15534 1290 aaPredicted RBP22.44■■□□□ 1.18
RPUSD3-209ENST00000451405 COL24A1Q17RW2 1714 aa22.44■■□□□ 1.18
RPUSD3-209ENST00000451405 AEBP1Q8IUX7 1158 aa22.44■■□□□ 1.18
RPUSD3-209ENST00000451405 TAF1LQ8IZX4 1826 aa22.44■■□□□ 1.18
RPUSD3-209ENST00000451405 C5P01031 1676 aa22.43■■□□□ 1.18
RPUSD3-209ENST00000451405 ASAP1Q9ULH1 1129 aa22.43■■□□□ 1.18
RPUSD3-209ENST00000451405 SMIM5Q71RC9 77 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms