RNA–Protein interactions for RNA: ENST00000450656.5

POLR2B-206, Transcript of RNA polymerase II subunit B, humanhuman

TSL 4

Gene POLR2B, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-206ENST00000450656 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
POLR2B-206ENST00000450656 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
POLR2B-206ENST00000450656 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
POLR2B-206ENST00000450656 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
POLR2B-206ENST00000450656 CNGB1Q14028 1251 aaPredicted RBP17.17■□□□□ 0.34
POLR2B-206ENST00000450656 SHANK3Q9BYB0 1731 aa17.17■□□□□ 0.34
POLR2B-206ENST00000450656 MYBBP1AQ9BQG0 1328 aaKnown RBP17.17■□□□□ 0.34
POLR2B-206ENST00000450656 FAM182BQ5T319 152 aa17.16■□□□□ 0.34
POLR2B-206ENST00000450656 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
POLR2B-206ENST00000450656 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
POLR2B-206ENST00000450656 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
POLR2B-206ENST00000450656 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
POLR2B-206ENST00000450656 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
POLR2B-206ENST00000450656 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
POLR2B-206ENST00000450656 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
POLR2B-206ENST00000450656 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
POLR2B-206ENST00000450656 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
POLR2B-206ENST00000450656 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
POLR2B-206ENST00000450656 AEBP1Q8IUX7 1158 aa17.12■□□□□ 0.33
POLR2B-206ENST00000450656 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
POLR2B-206ENST00000450656 EP400Q96L91 3159 aa17.12■□□□□ 0.33
POLR2B-206ENST00000450656 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
POLR2B-206ENST00000450656 RGPD3A6NKT7 1758 aaPredicted RBP17.1■□□□□ 0.33
POLR2B-206ENST00000450656 RGPD4Q7Z3J3 1758 aa17.1■□□□□ 0.33
POLR2B-206ENST00000450656 CYP27B1O15528 508 aa17.1■□□□□ 0.33
POLR2B-206ENST00000450656 TRIM37O94972 964 aa17.1■□□□□ 0.33
POLR2B-206ENST00000450656 BAG6P46379 1132 aa17.1■□□□□ 0.33
POLR2B-206ENST00000450656 IFNL2Q8IZJ0 200 aa17.1■□□□□ 0.33
POLR2B-206ENST00000450656 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
POLR2B-206ENST00000450656 U2SURPO15042 1029 aaKnown RBP17.08■□□□□ 0.32
POLR2B-206ENST00000450656 FCHSD2O94868 740 aa17.08■□□□□ 0.32
POLR2B-206ENST00000450656 PHKG2P15735 406 aa17.08■□□□□ 0.32
POLR2B-206ENST00000450656 PLSCR1O15162 318 aa17.07■□□□□ 0.32
POLR2B-206ENST00000450656 HSP90AB1P08238 724 aaKnown RBP17.07■□□□□ 0.32
POLR2B-206ENST00000450656 HMOX1P09601 288 aa17.06■□□□□ 0.32
POLR2B-206ENST00000450656 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
POLR2B-206ENST00000450656 DOT1LQ8TEK3 1739 aa17.05■□□□□ 0.32
POLR2B-206ENST00000450656 APBA3O96018 575 aa17.05■□□□□ 0.32
POLR2B-206ENST00000450656 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
POLR2B-206ENST00000450656 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
POLR2B-206ENST00000450656 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
POLR2B-206ENST00000450656 ZNF530Q6P9A1 599 aaPredicted RBP17.04■□□□□ 0.32
POLR2B-206ENST00000450656 CAMKK2Q96RR4 588 aa17.04■□□□□ 0.32
POLR2B-206ENST00000450656 ANP32CO43423 234 aa17.03■□□□□ 0.32
POLR2B-206ENST00000450656 KCNQ2O43526 872 aa17.03■□□□□ 0.32
POLR2B-206ENST00000450656 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
POLR2B-206ENST00000450656 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
POLR2B-206ENST00000450656 PNNQ9H307 717 aaKnown RBP17.03■□□□□ 0.32
POLR2B-206ENST00000450656 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.32
POLR2B-206ENST00000450656 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
POLR2B-206ENST00000450656 DEFB132Q7Z7B7 95 aa17.02■□□□□ 0.32
POLR2B-206ENST00000450656 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.32
POLR2B-206ENST00000450656 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
POLR2B-206ENST00000450656 RREB1Q92766 1687 aa17.01■□□□□ 0.31
POLR2B-206ENST00000450656 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
POLR2B-206ENST00000450656 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
POLR2B-206ENST00000450656 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
POLR2B-206ENST00000450656 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
POLR2B-206ENST00000450656 PTF1AQ7RTS3 328 aa17.01■□□□□ 0.31
POLR2B-206ENST00000450656 KDM6AO15550 1401 aaPredicted RBP17.01■□□□□ 0.31
POLR2B-206ENST00000450656 EN1Q05925 392 aaPredicted RBP17■□□□□ 0.31
POLR2B-206ENST00000450656 BTAF1O14981 1849 aa17■□□□□ 0.31
POLR2B-206ENST00000450656 MRC1P22897 1456 aa16.99■□□□□ 0.31
POLR2B-206ENST00000450656 SYTL4Q96C24 671 aaPredicted RBP16.98■□□□□ 0.31
POLR2B-206ENST00000450656 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
POLR2B-206ENST00000450656 MAP3K5Q99683 1374 aa16.98■□□□□ 0.31
POLR2B-206ENST00000450656 NEFMP07197 916 aa16.97■□□□□ 0.31
POLR2B-206ENST00000450656 HMGB2P26583 209 aaKnown RBP16.97■□□□□ 0.31
POLR2B-206ENST00000450656 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
POLR2B-206ENST00000450656 PHACTR3Q96KR7 559 aa16.97■□□□□ 0.31
POLR2B-206ENST00000450656 GNAT3A8MTJ3 354 aa16.96■□□□□ 0.31
POLR2B-206ENST00000450656 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
POLR2B-206ENST00000450656 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
POLR2B-206ENST00000450656 SMARCC1Q92922 1105 aaPredicted RBP16.96■□□□□ 0.31
POLR2B-206ENST00000450656 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
POLR2B-206ENST00000450656 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
POLR2B-206ENST00000450656 PIGBQ92521 554 aa16.95■□□□□ 0.3
POLR2B-206ENST00000450656 NUP188Q5SRE5 1749 aa16.95■□□□□ 0.3
POLR2B-206ENST00000450656 CEMIPQ8WUJ3 1361 aa16.94■□□□□ 0.3
POLR2B-206ENST00000450656 LY75O60449 1722 aa16.94■□□□□ 0.3
POLR2B-206ENST00000450656 TXNRD1Q16881 649 aa16.94■□□□□ 0.3
POLR2B-206ENST00000450656 MPRIPQ6WCQ1 1025 aa16.94■□□□□ 0.3
POLR2B-206ENST00000450656 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
POLR2B-206ENST00000450656 ITGB4P16144 1822 aa16.93■□□□□ 0.3
POLR2B-206ENST00000450656 RNMTO43148 476 aaKnown RBP16.93■□□□□ 0.3
POLR2B-206ENST00000450656 PROM2Q8N271 834 aa16.93■□□□□ 0.3
POLR2B-206ENST00000450656 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
POLR2B-206ENST00000450656 PALLDQ8WX93 1383 aa16.92■□□□□ 0.3
POLR2B-206ENST00000450656 CABP4P57796 275 aa16.92■□□□□ 0.3
POLR2B-206ENST00000450656 SLC52A2Q9HAB3 445 aa16.92■□□□□ 0.3
POLR2B-206ENST00000450656 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
POLR2B-206ENST00000450656 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
POLR2B-206ENST00000450656 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
POLR2B-206ENST00000450656 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
POLR2B-206ENST00000450656 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
POLR2B-206ENST00000450656 ADAMTS8Q9UP79 889 aa16.9■□□□□ 0.3
POLR2B-206ENST00000450656 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
POLR2B-206ENST00000450656 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
POLR2B-206ENST00000450656 RTF1Q92541 710 aaKnown RBP16.89■□□□□ 0.29
POLR2B-206ENST00000450656 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms