RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 TACC1O75410 805 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 UBTFL1P0CB47 393 aaPredicted RBP13.55□□□□□ -0.24
SHANK2-211ENST00000449833 LMAN1P49257 510 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 TUBB8Q3ZCM7 444 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 CEP57L1Q8IYX8 460 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 NEUROD6Q96NK8 337 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 FSD1Q9BTV5 496 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 GNAI1P63096 354 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 ERC1Q8IUD2 1116 aa13.55□□□□□ -0.24
SHANK2-211ENST00000449833 DIAPH1O60610 1272 aaKnown RBP13.55□□□□□ -0.24
SHANK2-211ENST00000449833 DDX12PQ92771 950 aa13.54□□□□□ -0.24
SHANK2-211ENST00000449833 LUC7L2Q9Y383 392 aaKnown RBP13.54□□□□□ -0.24
SHANK2-211ENST00000449833 PPFIBP2Q8ND30 876 aa13.54□□□□□ -0.24
SHANK2-211ENST00000449833 CCDC38Q502W7 563 aa13.54□□□□□ -0.24
SHANK2-211ENST00000449833 TRIM22Q8IYM9 498 aa13.54□□□□□ -0.24
SHANK2-211ENST00000449833 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-211ENST00000449833 KIF5CO60282 957 aa13.54□□□□□ -0.24
SHANK2-211ENST00000449833 K7ELQ4 463 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-211ENST00000449833 TRAK1Q9UPV9 953 aa13.54□□□□□ -0.24
SHANK2-211ENST00000449833 TRIM21P19474 475 aaKnown RBP13.53□□□□□ -0.24
SHANK2-211ENST00000449833 CCDC174Q6PII3 467 aa13.53□□□□□ -0.24
SHANK2-211ENST00000449833 CETN2P41208 172 aa13.53□□□□□ -0.24
SHANK2-211ENST00000449833 CEP112Q8N8E3 955 aa13.53□□□□□ -0.24
SHANK2-211ENST00000449833 IFFO1Q0D2I5 559 aa13.53□□□□□ -0.24
SHANK2-211ENST00000449833 UPF3BQ9BZI7 483 aaKnown RBP13.53□□□□□ -0.24
SHANK2-211ENST00000449833 ZWINTO95229 277 aa13.53□□□□□ -0.24
SHANK2-211ENST00000449833 CCDC113Q9H0I3 377 aa13.53□□□□□ -0.24
SHANK2-211ENST00000449833 CYP46A1Q9Y6A2 500 aa13.53□□□□□ -0.24
SHANK2-211ENST00000449833 C10orf67Q8IYJ2 551 aa13.52□□□□□ -0.24
SHANK2-211ENST00000449833 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.24
SHANK2-211ENST00000449833 TUBB4AP04350 444 aa13.52□□□□□ -0.24
SHANK2-211ENST00000449833 NAA25Q14CX7 972 aa13.52□□□□□ -0.24
SHANK2-211ENST00000449833 NAA15Q9BXJ9 866 aaKnown RBP13.52□□□□□ -0.24
SHANK2-211ENST00000449833 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 EBAG9O00559 213 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 CLCN1P35523 988 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 NUP62CLQ9H1M0 184 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 TSPYL4Q9UJ04 414 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 WASHC2CQ9Y4E1 1318 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 CCDC160A6NGH7 325 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 CDKL5O76039 1030 aa13.52□□□□□ -0.25
SHANK2-211ENST00000449833 ANAPC15P60006 121 aa13.51□□□□□ -0.25
SHANK2-211ENST00000449833 MIA2Q96PC5 1412 aa13.51□□□□□ -0.25
SHANK2-211ENST00000449833 EFCAB2Q5VUJ9 269 aa13.51□□□□□ -0.25
SHANK2-211ENST00000449833 CCDC97Q96F63 343 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-211ENST00000449833 POTEJP0CG39 1038 aa13.51□□□□□ -0.25
SHANK2-211ENST00000449833 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
SHANK2-211ENST00000449833 B4GALNT4Q76KP1 1039 aa13.51□□□□□ -0.25
SHANK2-211ENST00000449833 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 PANK1Q8TE04 598 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 SPA17Q15506 151 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 ARFGAP3Q9NP61 516 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 RABGAP1Q9Y3P9 1069 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 MSH5O43196 834 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 NEBLO76041 1014 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 SFPQP23246 707 aaKnown RBP eCLIP13.5□□□□□ -0.252e-6■■□□□ 14.2
SHANK2-211ENST00000449833 MAP2K2P36507 400 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 ZNF365Q70YC5 407 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 GSDMDP57764 484 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 ZNF853P0CG23 659 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 LMNTD2Q8IXW0 634 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 CEP120Q8N960 986 aa13.5□□□□□ -0.25
SHANK2-211ENST00000449833 EIF5P55010 431 aaKnown RBP13.49□□□□□ -0.25
SHANK2-211ENST00000449833 FEZ2Q9UHY8 353 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-211ENST00000449833 CAVIN2O95810 425 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 MAP3K11Q16584 847 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 NOL7Q9UMY1 257 aaKnown RBP13.49□□□□□ -0.25
SHANK2-211ENST00000449833 SOGA1O94964 1423 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 STMN1P16949 149 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 CEP57Q86XR8 500 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 GCC1Q96CN9 775 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.49□□□□□ -0.25
SHANK2-211ENST00000449833 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-211ENST00000449833 CEP128Q6ZU80 1094 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 STMN4Q9H169 189 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-211ENST00000449833 DBN1Q16643 649 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
SHANK2-211ENST00000449833 BMP2KQ9NSY1 1161 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-211ENST00000449833 KDM4AO75164 1064 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 TUBBP07437 444 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 CCDC171Q6TFL3 1326 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 CFAP100Q494V2 611 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
SHANK2-211ENST00000449833 NUTM1Q86Y26 1132 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 MTMR7Q9Y216 660 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 STIM2Q9P246 746 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 FBF1Q8TES7 1133 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 DNAI2Q9GZS0 605 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 CNTLNQ9NXG0 1405 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-211ENST00000449833 VCXQ9H320 206 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
SHANK2-211ENST00000449833 AIMP1Q12904 312 aaKnown RBP13.48□□□□□ -0.25
SHANK2-211ENST00000449833 CCDC69A6NI79 296 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 SMC6Q96SB8 1091 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms