RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 FAM173BQ6P4H8 233 aa14.84□□□□□ -0.03
UBE3B-204ENST00000449510 RPAP2Q8IXW5 612 aaPredicted RBP14.84□□□□□ -0.03
UBE3B-204ENST00000449510 SDF4Q9BRK5 362 aa14.84□□□□□ -0.03
UBE3B-204ENST00000449510 MX1P20591 662 aa14.83□□□□□ -0.03
UBE3B-204ENST00000449510 SIL1Q9H173 461 aa14.83□□□□□ -0.03
UBE3B-204ENST00000449510 BBXQ8WY36 941 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-204ENST00000449510 CCDC141Q6ZP82 1450 aa14.83□□□□□ -0.04
UBE3B-204ENST00000449510 GSPT1P15170 499 aaKnown RBP14.83□□□□□ -0.04
UBE3B-204ENST00000449510 ZFP91Q96JP5 570 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-204ENST00000449510 SRGAP3O43295 1099 aa14.82□□□□□ -0.04
UBE3B-204ENST00000449510 TNNT1P13805 278 aa14.82□□□□□ -0.04
UBE3B-204ENST00000449510 CCDC183Q5T5S1 534 aa14.82□□□□□ -0.04
UBE3B-204ENST00000449510 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
UBE3B-204ENST00000449510 GPATCH3Q96I76 525 aa14.82□□□□□ -0.04
UBE3B-204ENST00000449510 CUL7Q14999 1698 aa14.82□□□□□ -0.04
UBE3B-204ENST00000449510 MRPL50Q8N5N7 158 aaKnown RBP14.81□□□□□ -0.04
UBE3B-204ENST00000449510 CCDC186Q7Z3E2 898 aa14.81□□□□□ -0.04
UBE3B-204ENST00000449510 HTATSF1O43719 755 aaKnown RBP14.81□□□□□ -0.04
UBE3B-204ENST00000449510 DNM1Q05193 864 aaKnown RBP14.81□□□□□ -0.04
UBE3B-204ENST00000449510 NUP62CLQ9H1M0 184 aa14.81□□□□□ -0.04
UBE3B-204ENST00000449510 VGLL3A8MV65 326 aa14.8□□□□□ -0.04
UBE3B-204ENST00000449510 TULP1O00294 542 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-204ENST00000449510 PPP1R9BQ96SB3 815 aa14.8□□□□□ -0.04
UBE3B-204ENST00000449510 PIK3C2GO75747 1445 aa14.8□□□□□ -0.04
UBE3B-204ENST00000449510 SMC2O95347 1197 aa14.8□□□□□ -0.04
UBE3B-204ENST00000449510 AEBP1Q8IUX7 1158 aa14.8□□□□□ -0.04
UBE3B-204ENST00000449510 RUFY2Q8WXA3 655 aa14.8□□□□□ -0.04
UBE3B-204ENST00000449510 POLR3AO14802 1390 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-204ENST00000449510 KDM5CP41229 1560 aa14.8□□□□□ -0.04
UBE3B-204ENST00000449510 PDE1AP54750 535 aa14.8□□□□□ -0.04
UBE3B-204ENST00000449510 CCDC94Q9BW85 323 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-204ENST00000449510 LRRFIP2Q9Y608 721 aaKnown RBP14.79□□□□□ -0.04
UBE3B-204ENST00000449510 SYNJ2O15056 1496 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 FAM135AQ9P2D6 1515 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 PTGS1P23219 599 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 ZNF445P59923 1031 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 TMX1Q9H3N1 280 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 RAPGEF3O95398 923 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 KRT85P78386 507 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 CNTROBQ8N137 903 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 PLCD3Q8N3E9 789 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 PDRG1Q9NUG6 133 aa14.79□□□□□ -0.04
UBE3B-204ENST00000449510 STX6O43752 255 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 GNAI3P08754 354 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 TTLL5Q6EMB2 1281 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 CLASRPQ8N2M8 674 aaKnown RBP14.78□□□□□ -0.04
UBE3B-204ENST00000449510 SYTL4Q96C24 671 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-204ENST00000449510 SPATA32Q96LK8 384 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 ANXA1P04083 346 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 FSD1Q9BTV5 496 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 CYP46A1Q9Y6A2 500 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 POLR3GO15318 223 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-204ENST00000449510 GUCY1B3Q02153 619 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 MAP3K11Q16584 847 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 MNS1Q8NEH6 495 aa14.78□□□□□ -0.04
UBE3B-204ENST00000449510 NOS1P29475 1434 aa14.77□□□□□ -0.04
UBE3B-204ENST00000449510 MCM5P33992 734 aa14.77□□□□□ -0.05
UBE3B-204ENST00000449510 CCDC73Q6ZRK6 1079 aa14.77□□□□□ -0.05
UBE3B-204ENST00000449510 LUZP1Q86V48 1076 aa14.77□□□□□ -0.05
UBE3B-204ENST00000449510 CHMP4AQ9BY43 222 aa14.77□□□□□ -0.05
UBE3B-204ENST00000449510 DCTPP1Q9H773 170 aa14.77□□□□□ -0.05
UBE3B-204ENST00000449510 GJB2P29033 226 aa14.76□□□□□ -0.05
UBE3B-204ENST00000449510 INSRP06213 1382 aa14.76□□□□□ -0.05
UBE3B-204ENST00000449510 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
UBE3B-204ENST00000449510 LETM1O95202 739 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-204ENST00000449510 HDGFL1Q5TGJ6 251 aa14.76□□□□□ -0.05
UBE3B-204ENST00000449510 PALD1Q9ULE6 856 aa14.76□□□□□ -0.05
UBE3B-204ENST00000449510 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
UBE3B-204ENST00000449510 PDILTQ8N807 584 aa14.76□□□□□ -0.05
UBE3B-204ENST00000449510 NCKAP5LQ9HCH0 1330 aa14.76□□□□□ -0.05
UBE3B-204ENST00000449510 TEFQ10587 303 aa14.75□□□□□ -0.05
UBE3B-204ENST00000449510 ISM2Q6H9L7 571 aa14.75□□□□□ -0.05
UBE3B-204ENST00000449510 KIF14Q15058 1648 aa14.75□□□□□ -0.05
UBE3B-204ENST00000449510 ANKRD44Q8N8A2 993 aa14.75□□□□□ -0.05
UBE3B-204ENST00000449510 ESYT1Q9BSJ8 1104 aa14.75□□□□□ -0.05
UBE3B-204ENST00000449510 CLIP2Q9UDT6 1046 aa14.75□□□□□ -0.05
UBE3B-204ENST00000449510 ME1P48163 572 aa14.74□□□□□ -0.05
UBE3B-204ENST00000449510 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.05
UBE3B-204ENST00000449510 CEP85Q6P2H3 762 aa14.74□□□□□ -0.05
UBE3B-204ENST00000449510 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
UBE3B-204ENST00000449510 DNAJC2Q99543 621 aaKnown RBP14.74□□□□□ -0.05
UBE3B-204ENST00000449510 SRCIN1Q9C0H9 1055 aa14.74□□□□□ -0.05
UBE3B-204ENST00000449510 ATP10BO94823 1461 aa14.74□□□□□ -0.05
UBE3B-204ENST00000449510 G2E3Q7L622 706 aa14.74□□□□□ -0.05
UBE3B-204ENST00000449510 PRIMPOLQ96LW4 560 aa14.74□□□□□ -0.05
UBE3B-204ENST00000449510 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-204ENST00000449510 KINO60870 393 aaKnown RBP14.73□□□□□ -0.05
UBE3B-204ENST00000449510 ATP2B1P20020 1258 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 ZNF165P49910 485 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 TPM4P67936 248 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 HS1BP3Q53T59 392 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 LIMCH1Q9UPQ0 1083 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 PES1O00541 588 aaKnown RBP14.73□□□□□ -0.05
UBE3B-204ENST00000449510 IDI1Q13907 227 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 PTPN14Q15678 1187 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 BCL2L12Q9HB09 334 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 POLKQ9UBT6 870 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 FOXO3O43524 673 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 RAB11FIP3O75154 756 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 CCT4P50991 539 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms