RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 SART3Q15020 963 aaKnown RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 MCM2P49736 904 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 NBPF5PQ86XG9 351 aaPredicted RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 CRACR2BQ8N4Y2 399 aaPredicted RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 PDILTQ8N807 584 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 ARGLU1Q9NWB6 273 aaPredicted RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 IGHMBP2P38935 993 aaKnown RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
PRDM15-208ENST00000449395 CAVIN1Q6NZI2 390 aaKnown RBP12.53□□□□□ -0.4
PRDM15-208ENST00000449395 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
PRDM15-208ENST00000449395 DDX17Q92841 729 aaKnown RBP12.53□□□□□ -0.4
PRDM15-208ENST00000449395 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
PRDM15-208ENST00000449395 CFTRP13569 1480 aa12.53□□□□□ -0.4
PRDM15-208ENST00000449395 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
PRDM15-208ENST00000449395 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
PRDM15-208ENST00000449395 RABEP1Q15276 862 aa12.53□□□□□ -0.4
PRDM15-208ENST00000449395 EPS15P42566 896 aa12.52□□□□□ -0.4
PRDM15-208ENST00000449395 SCLT1Q96NL6 688 aa12.52□□□□□ -0.4
PRDM15-208ENST00000449395 HFM1A2PYH4 1435 aa12.52□□□□□ -0.4
PRDM15-208ENST00000449395 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.4
PRDM15-208ENST00000449395 BCAR3O75815 825 aa12.52□□□□□ -0.41
PRDM15-208ENST00000449395 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
PRDM15-208ENST00000449395 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.41
PRDM15-208ENST00000449395 MBD3O95983 291 aa12.52□□□□□ -0.41
PRDM15-208ENST00000449395 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
PRDM15-208ENST00000449395 SLC12A5Q9H2X9 1139 aa12.52□□□□□ -0.41
PRDM15-208ENST00000449395 CT47A1Q5JQC4 288 aaPredicted RBP12.52□□□□□ -0.41
PRDM15-208ENST00000449395 PDCP20941 246 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
PRDM15-208ENST00000449395 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 RRS1Q15050 365 aaKnown RBP12.51□□□□□ -0.41
PRDM15-208ENST00000449395 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 ACBD3Q9H3P7 528 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 GRIN2AQ12879 1464 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
PRDM15-208ENST00000449395 PRKG1Q13976 671 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
PRDM15-208ENST00000449395 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 OFD1O75665 1012 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
PRDM15-208ENST00000449395 TSPY26PQ9H489 355 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 VEZTQ9HBM0 779 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 KIAA1107Q9UPP5 1409 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 GNPATO15228 680 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 KRT27Q7Z3Y8 459 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 KCNA4P22459 653 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 TTC39AQ5SRH9 613 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 DDX46Q7L014 1031 aaKnown RBP12.5□□□□□ -0.41
PRDM15-208ENST00000449395 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
PRDM15-208ENST00000449395 ATP2B1P20020 1258 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 CCT4P50991 539 aaKnown RBP12.49□□□□□ -0.41
PRDM15-208ENST00000449395 KIF22Q14807 665 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 CDR1P51861 262 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 ODF2Q5BJF6 829 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
PRDM15-208ENST00000449395 CCDC158Q5M9N0 1113 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 SMC2O95347 1197 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 ZNF396Q96N95 335 aaPredicted RBP12.49□□□□□ -0.41
PRDM15-208ENST00000449395 FEZ1Q99689 392 aa12.49□□□□□ -0.41
PRDM15-208ENST00000449395 HSPA1LP34931 641 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 ERBINQ96RT1 1412 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
PRDM15-208ENST00000449395 SMARCC1Q92922 1105 aaPredicted RBP12.48□□□□□ -0.41
PRDM15-208ENST00000449395 LRRCC1Q9C099 1032 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 GPTP24298 496 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 HSP90B2PQ58FF3 399 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 FIBPO43427 364 aa12.48□□□□□ -0.41
PRDM15-208ENST00000449395 GPBP1L1Q9HC44 474 aaPredicted RBP12.47□□□□□ -0.41
PRDM15-208ENST00000449395 EHBP1L1Q8N3D4 1523 aa12.47□□□□□ -0.41
PRDM15-208ENST00000449395 YY1P25490 414 aa12.47□□□□□ -0.41
PRDM15-208ENST00000449395 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
PRDM15-208ENST00000449395 CAGE1Q8TC20 777 aa12.47□□□□□ -0.41
PRDM15-208ENST00000449395 A0A087WZG4 1122 aa12.47□□□□□ -0.41
PRDM15-208ENST00000449395 TTLL5Q6EMB2 1281 aa12.47□□□□□ -0.41
PRDM15-208ENST00000449395 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
PRDM15-208ENST00000449395 CEBPZQ03701 1054 aaKnown RBP12.47□□□□□ -0.41
PRDM15-208ENST00000449395 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
PRDM15-208ENST00000449395 CYP46A1Q9Y6A2 500 aa12.47□□□□□ -0.41
PRDM15-208ENST00000449395 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
PRDM15-208ENST00000449395 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
PRDM15-208ENST00000449395 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
PRDM15-208ENST00000449395 STK38Q15208 465 aa12.46□□□□□ -0.41
PRDM15-208ENST00000449395 FILIP1LQ4L180 1135 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms