RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LRRFIP1Q32MZ4 808 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-209ENST00000448940 PPIP5K1Q6PFW1 1433 aa6.99□□□□□ -1.29
CDC42BPA-209ENST00000448940 GLI2P10070 1586 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 DDX46Q7L014 1031 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 IGHMBP2P38935 993 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 GNL2Q13823 731 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 PRIM1P49642 420 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 NINLQ9Y2I6 1382 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 CCDC30Q5VVM6 783 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 ERVK-7P63135 1459 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 TPTE2Q6XPS3 522 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 PPP1R42Q7Z4L9 355 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 STK25O00506 426 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 TPRNQ4KMQ1 711 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 DCPSQ96C86 337 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 MTMR7Q9Y216 660 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 MYO5CQ9NQX4 1742 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 ABCC11Q96J66 1382 aa6.98□□□□□ -1.29
CDC42BPA-209ENST00000448940 LARGE2Q8N3Y3 721 aa6.97□□□□□ -1.29
CDC42BPA-209ENST00000448940 ARHGEF12Q9NZN5 1544 aa6.97□□□□□ -1.29
CDC42BPA-209ENST00000448940 PAF1Q8N7H5 531 aa6.97□□□□□ -1.29
CDC42BPA-209ENST00000448940 APPP05067 770 aa6.97□□□□□ -1.29
CDC42BPA-209ENST00000448940 NLGN1Q8N2Q7 840 aa6.97□□□□□ -1.29
CDC42BPA-209ENST00000448940 LARP1Q6PKG0 1096 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-209ENST00000448940 EMILIN1Q9Y6C2 1016 aa6.97□□□□□ -1.29
CDC42BPA-209ENST00000448940 RNF181Q9P0P0 153 aa6.96□□□□□ -1.29
CDC42BPA-209ENST00000448940 THRAP3Q9Y2W1 955 aaKnown RBP6.96□□□□□ -1.29
CDC42BPA-209ENST00000448940 CCDC7Q96M83 1385 aa6.96□□□□□ -1.29
CDC42BPA-209ENST00000448940 NIM1KQ8IY84 436 aa6.96□□□□□ -1.29
CDC42BPA-209ENST00000448940 VEZTQ9HBM0 779 aa6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 TRMT112Q9UI30 125 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 SULF1Q8IWU6 871 aa6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 IP6K1Q92551 441 aa6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 G3BP1Q13283 466 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 PRKG1Q13976 671 aa6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 RUNDC1Q96C34 613 aa6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 FEZ1Q99689 392 aa6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 COL17A1Q9UMD9 1497 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 ABCC1P33527 1531 aa6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 NLRP3Q96P20 1036 aa6.96□□□□□ -1.3
CDC42BPA-209ENST00000448940 ITPRIPQ8IWB1 547 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 DCAF5Q96JK2 942 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 MYBBP1AQ9BQG0 1328 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 E9PSI1 815 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 ZBTB33Q86T24 672 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 NYXQ9GZU5 481 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 SAMD9LQ8IVG5 1584 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 DALRD3Q5D0E6 543 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 KIAA0232Q92628 1395 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 SPATA31A3Q5VYP0 1347 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 ECE1P42892 770 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 DEFB132Q7Z7B7 95 aa6.95□□□□□ -1.3
CDC42BPA-209ENST00000448940 ZNF428Q96B54 188 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 LBHD1Q9BQE6 289 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 CCDC57Q2TAC2 916 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 DPF3Q92784 378 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 PIK3C2GO75747 1445 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 CNBD1Q8NA66 436 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 NSD3Q9BZ95 1437 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 TTC37Q6PGP7 1564 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 CAMSAP1Q5T5Y3 1602 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 PLEKHG3A1L390 1219 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 VPS72Q15906 364 aa6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 API5Q9BZZ5 524 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 ZC3H12CQ9C0D7 883 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-209ENST00000448940 HINFPQ9BQA5 517 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 CARD10Q9BWT7 1032 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 SNRPA1P09661 255 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 ERFEQ4G0M1 354 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 HSP90AB2PQ58FF8 381 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 NEUROD6Q96NK8 337 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 BRD4O60885 1362 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 GPTP24298 496 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 TAF7Q15545 349 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 EYA3Q99504 573 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 FLT4P35916 1363 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 APAF1O14727 1248 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 KIAA1211Q6ZU35 1233 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 TSPYL2Q9H2G4 693 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 CHAF1AQ13111 956 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 MYO9BQ13459 2157 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 ARHGEF40Q8TER5 1519 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 ZRSR1Q15695 479 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 C2orf69Q8N8R5 385 aa6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 CDC5LQ99459 802 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 NIP7Q9Y221 180 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDC42BPA-209ENST00000448940 AGLP35573 1532 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 CCDC129Q6ZRS4 1044 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 ADGRL3Q9HAR2 1447 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 METP08581 1390 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 RIMS1Q86UR5 1692 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 PDE6BP35913 854 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 ZBTB3Q9H5J0 574 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 CCDC136Q96JN2 1154 aa6.92□□□□□ -1.3
CDC42BPA-209ENST00000448940 ABCA9Q8IUA7 1624 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 KDM5CP41229 1560 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms