RNA–Protein interactions for RNA: ENST00000448786.1

AC007879.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC007879.3, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.3-202ENST00000448786 ITGA6P23229 1130 aa7.86□□□□□ -1.15
AC007879.3-202ENST00000448786 ERVK-9P63128 1117 aa7.86□□□□□ -1.15
AC007879.3-202ENST00000448786 EIF4G2P78344 907 aaKnown RBP eCLIP7.86□□□□□ -1.15
AC007879.3-202ENST00000448786 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
AC007879.3-202ENST00000448786 SV2AQ7L0J3 742 aa7.86□□□□□ -1.15
AC007879.3-202ENST00000448786 KDF1Q8NAX2 398 aaPredicted RBP7.86□□□□□ -1.15
AC007879.3-202ENST00000448786 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
AC007879.3-202ENST00000448786 NLRP3Q96P20 1036 aa7.86□□□□□ -1.15
AC007879.3-202ENST00000448786 RNF144AP50876 292 aaPredicted RBP7.85□□□□□ -1.15
AC007879.3-202ENST00000448786 PRICKLE2Q7Z3G6 844 aa7.85□□□□□ -1.15
AC007879.3-202ENST00000448786 TBC1D2BQ9UPU7 963 aa7.85□□□□□ -1.15
AC007879.3-202ENST00000448786 A0A1W2PRU2 124 aa7.84□□□□□ -1.15
AC007879.3-202ENST00000448786 GPR37L1O60883 481 aa7.84□□□□□ -1.15
AC007879.3-202ENST00000448786 MYCP01106 439 aaPredicted RBP7.84□□□□□ -1.15
AC007879.3-202ENST00000448786 GPC1P35052 558 aa7.84□□□□□ -1.15
AC007879.3-202ENST00000448786 VWA5B2Q8N398 1253 aa7.84□□□□□ -1.15
AC007879.3-202ENST00000448786 CEP126Q9P2H0 1117 aa7.84□□□□□ -1.15
AC007879.3-202ENST00000448786 SLC27A3Q5K4L6 730 aa7.83□□□□□ -1.16
AC007879.3-202ENST00000448786 GPR161Q8N6U8 529 aaKnown RBP7.83□□□□□ -1.16
AC007879.3-202ENST00000448786 CNTNAP3BQ96NU0 1288 aa7.83□□□□□ -1.16
AC007879.3-202ENST00000448786 COL25A1Q9BXS0 654 aaPredicted RBP7.83□□□□□ -1.16
AC007879.3-202ENST00000448786 CNTNAP3Q9BZ76 1288 aa7.83□□□□□ -1.16
AC007879.3-202ENST00000448786 PRKCSHP14314 528 aaPredicted RBP7.82□□□□□ -1.16
AC007879.3-202ENST00000448786 SENP3-EIF4A1A0A087X0R7 540 aa7.81□□□□□ -1.16
AC007879.3-202ENST00000448786 RHOQP17081 205 aa7.81□□□□□ -1.16
AC007879.3-202ENST00000448786 SCTRP47872 440 aa7.81□□□□□ -1.16
AC007879.3-202ENST00000448786 ABL2P42684 1182 aa7.8□□□□□ -1.16
AC007879.3-202ENST00000448786 CLN3Q13286 438 aa7.8□□□□□ -1.16
AC007879.3-202ENST00000448786 SLFNL1Q499Z3 407 aa7.8□□□□□ -1.16
AC007879.3-202ENST00000448786 OSBPL3Q9H4L5 887 aa7.8□□□□□ -1.16
AC007879.3-202ENST00000448786 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
AC007879.3-202ENST00000448786 GNRH1P01148 92 aa7.79□□□□□ -1.16
AC007879.3-202ENST00000448786 GTF2E1P29083 439 aaPredicted RBP7.79□□□□□ -1.16
AC007879.3-202ENST00000448786 WASHC4Q2M389 1173 aa7.79□□□□□ -1.16
AC007879.3-202ENST00000448786 FOXR1Q6PIV2 292 aa7.79□□□□□ -1.16
AC007879.3-202ENST00000448786 GDPD2Q9HCC8 539 aa7.79□□□□□ -1.16
AC007879.3-202ENST00000448786 TRAK2O60296 914 aa7.78□□□□□ -1.16
AC007879.3-202ENST00000448786 KRT76Q01546 638 aa7.78□□□□□ -1.16
AC007879.3-202ENST00000448786 USP4Q13107 963 aa7.78□□□□□ -1.16
AC007879.3-202ENST00000448786 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
AC007879.3-202ENST00000448786 GMCL1Q96IK5 515 aa7.78□□□□□ -1.16
AC007879.3-202ENST00000448786 CCDC85AQ96PX6 553 aaPredicted RBP7.78□□□□□ -1.16
AC007879.3-202ENST00000448786 POU4F2Q12837 409 aa7.77□□□□□ -1.17
AC007879.3-202ENST00000448786 IRF5Q13568 498 aa7.77□□□□□ -1.17
AC007879.3-202ENST00000448786 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
AC007879.3-202ENST00000448786 SIRT1Q96EB6 747 aa7.77□□□□□ -1.17
AC007879.3-202ENST00000448786 GAS2L1Q99501 681 aaPredicted RBP7.77□□□□□ -1.17
AC007879.3-202ENST00000448786 GRIP2Q9C0E4 1043 aa7.77□□□□□ -1.17
AC007879.3-202ENST00000448786 DOLKQ9UPQ8 538 aa7.77□□□□□ -1.17
AC007879.3-202ENST00000448786 DYRK1BQ9Y463 629 aa7.77□□□□□ -1.17
AC007879.3-202ENST00000448786 H7C1W4 665 aa7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 VAC14Q08AM6 782 aa7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 ESCO1Q5FWF5 840 aa7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 RNFT1Q5M7Z0 435 aa7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 NBPF10Q6P3W6 841 aaKnown RBP7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 NBPF15Q8N660 670 aa7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 CNKSR1Q969H4 720 aa7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 CDCA7Q9BWT1 371 aaPredicted RBP7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 RAB6BQ9NRW1 208 aa7.76□□□□□ -1.17
AC007879.3-202ENST00000448786 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
AC007879.3-202ENST00000448786 WDR44Q5JSH3 913 aa7.75□□□□□ -1.17
AC007879.3-202ENST00000448786 TAS1R3Q7RTX0 852 aa7.75□□□□□ -1.17
AC007879.3-202ENST00000448786 WWC1Q8IX03 1113 aa7.75□□□□□ -1.17
AC007879.3-202ENST00000448786 TRIM22Q8IYM9 498 aa7.75□□□□□ -1.17
AC007879.3-202ENST00000448786 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
AC007879.3-202ENST00000448786 TIMMDC1Q9NPL8 285 aa7.75□□□□□ -1.17
AC007879.3-202ENST00000448786 SPATA31C2B4DYI2 1134 aa7.74□□□□□ -1.17
AC007879.3-202ENST00000448786 SOX11P35716 441 aa7.74□□□□□ -1.17
AC007879.3-202ENST00000448786 CENPCQ03188 943 aa7.74□□□□□ -1.17
AC007879.3-202ENST00000448786 SVOPQ8N4V2 548 aa7.74□□□□□ -1.17
AC007879.3-202ENST00000448786 ZSCAN10Q96SZ4 725 aaPredicted RBP7.74□□□□□ -1.17
AC007879.3-202ENST00000448786 CUEDC1Q9NWM3 386 aaPredicted RBP7.74□□□□□ -1.17
AC007879.3-202ENST00000448786 WASLO00401 505 aaPredicted RBP7.73□□□□□ -1.17
AC007879.3-202ENST00000448786 SLURP2P0DP57 97 aa7.73□□□□□ -1.17
AC007879.3-202ENST00000448786 MCM6Q14566 821 aa7.73□□□□□ -1.17
AC007879.3-202ENST00000448786 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
AC007879.3-202ENST00000448786 GNASQ5JWF2 1037 aa7.73□□□□□ -1.17
AC007879.3-202ENST00000448786 TMEM214Q6NUQ4 689 aaKnown RBP7.73□□□□□ -1.17
AC007879.3-202ENST00000448786 TRERF1Q96PN7 1200 aa7.73□□□□□ -1.17
AC007879.3-202ENST00000448786 IL2RAP01589 272 aa7.72□□□□□ -1.17
AC007879.3-202ENST00000448786 PHTF2Q8N3S3 785 aa7.72□□□□□ -1.17
AC007879.3-202ENST00000448786 ZNF837Q96EG3 531 aaPredicted RBP7.72□□□□□ -1.17
AC007879.3-202ENST00000448786 XAGE2Q96GT9 111 aa7.72□□□□□ -1.17
AC007879.3-202ENST00000448786 ADAMTS2O95450 1211 aa7.71□□□□□ -1.18
AC007879.3-202ENST00000448786 F11P03951 625 aa7.71□□□□□ -1.18
AC007879.3-202ENST00000448786 GSK3AP49840 483 aa7.71□□□□□ -1.18
AC007879.3-202ENST00000448786 SRSF11Q05519 484 aaKnown RBP7.71□□□□□ -1.18
AC007879.3-202ENST00000448786 DBN1Q16643 649 aa7.71□□□□□ -1.18
AC007879.3-202ENST00000448786 MAP7D1Q3KQU3 841 aa7.71□□□□□ -1.18
AC007879.3-202ENST00000448786 TSGA10IPQ3SY00 556 aa7.71□□□□□ -1.18
AC007879.3-202ENST00000448786 RNF225M0QZC1 329 aaPredicted RBP7.7□□□□□ -1.18
AC007879.3-202ENST00000448786 RAD21O60216 631 aa7.7□□□□□ -1.18
AC007879.3-202ENST00000448786 MAP3K10Q02779 954 aa7.7□□□□□ -1.18
AC007879.3-202ENST00000448786 ZNF385CQ66K41 422 aaPredicted RBP7.7□□□□□ -1.18
AC007879.3-202ENST00000448786 GTPBP3Q969Y2 492 aaKnown RBP7.7□□□□□ -1.18
AC007879.3-202ENST00000448786 ADAMTS8Q9UP79 889 aa7.7□□□□□ -1.18
AC007879.3-202ENST00000448786 GPR25O00155 361 aa7.69□□□□□ -1.18
AC007879.3-202ENST00000448786 PHKA2P46019 1235 aa7.69□□□□□ -1.18
AC007879.3-202ENST00000448786 NUCKS1Q9H1E3 243 aaKnown RBP7.69□□□□□ -1.18
AC007879.3-202ENST00000448786 MBIPQ9NS73 344 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms