RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 RGPD3A6NKT7 1758 aaPredicted RBP15.01□□□□□ -0.01
NPIPB3-202ENST00000448012 RGPD4Q7Z3J3 1758 aa15.01□□□□□ -0.01
NPIPB3-202ENST00000448012 NUP188Q5SRE5 1749 aa15□□□□□ -0.01
NPIPB3-202ENST00000448012 PCDH11XQ9BZA7 1347 aa15□□□□□ -0.01
NPIPB3-202ENST00000448012 PCDH11YQ9BZA8 1340 aa15□□□□□ -0.01
NPIPB3-202ENST00000448012 PRIM1P49642 420 aaKnown RBP15□□□□□ -0.01
NPIPB3-202ENST00000448012 SLC15A2Q16348 729 aa15□□□□□ -0.01
NPIPB3-202ENST00000448012 PROM2Q8N271 834 aa15□□□□□ -0.01
NPIPB3-202ENST00000448012 NSD2O96028 1365 aa14.99□□□□□ -0.01
NPIPB3-202ENST00000448012 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
NPIPB3-202ENST00000448012 SLC27A3Q5K4L6 730 aa14.99□□□□□ -0.01
NPIPB3-202ENST00000448012 MORC1Q86VD1 984 aa14.99□□□□□ -0.01
NPIPB3-202ENST00000448012 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
NPIPB3-202ENST00000448012 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
NPIPB3-202ENST00000448012 MYOM1P52179 1685 aa14.99□□□□□ -0.01
NPIPB3-202ENST00000448012 SBF2Q86WG5 1849 aa14.99□□□□□ -0.01
NPIPB3-202ENST00000448012 MEGF6O75095 1541 aa14.98□□□□□ -0.01
NPIPB3-202ENST00000448012 NHSQ6T4R5 1651 aa14.98□□□□□ -0.01
NPIPB3-202ENST00000448012 POLKQ9UBT6 870 aa14.97□□□□□ -0.01
NPIPB3-202ENST00000448012 ZBTB7AO95365 584 aa14.95□□□□□ -0.02
NPIPB3-202ENST00000448012 MTFR1LQ9H019 292 aa14.94□□□□□ -0.02
NPIPB3-202ENST00000448012 CCNL1Q9UK58 526 aaPredicted RBP14.94□□□□□ -0.02
NPIPB3-202ENST00000448012 EYA1Q99502 592 aa14.93□□□□□ -0.02
NPIPB3-202ENST00000448012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.93□□□□□ -0.02
NPIPB3-202ENST00000448012 TFCP2L1Q9NZI6 479 aa14.93□□□□□ -0.02
NPIPB3-202ENST00000448012 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
NPIPB3-202ENST00000448012 EIF4A2Q14240 407 aaKnown RBP14.92□□□□□ -0.02
NPIPB3-202ENST00000448012 MPRIPQ6WCQ1 1025 aa14.92□□□□□ -0.02
NPIPB3-202ENST00000448012 SMARCC1Q92922 1105 aaPredicted RBP14.92□□□□□ -0.02
NPIPB3-202ENST00000448012 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
NPIPB3-202ENST00000448012 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
NPIPB3-202ENST00000448012 LRRC4BQ9NT99 713 aa14.91□□□□□ -0.02
NPIPB3-202ENST00000448012 CYP27B1O15528 508 aa14.9□□□□□ -0.02
NPIPB3-202ENST00000448012 POLD1P28340 1107 aa14.9□□□□□ -0.02
NPIPB3-202ENST00000448012 IFNL2Q8IZJ0 200 aa14.9□□□□□ -0.02
NPIPB3-202ENST00000448012 SLC16A10Q8TF71 515 aa14.9□□□□□ -0.02
NPIPB3-202ENST00000448012 BTAF1O14981 1849 aa14.89□□□□□ -0.03
NPIPB3-202ENST00000448012 KAT6BQ8WYB5 2073 aa14.89□□□□□ -0.03
NPIPB3-202ENST00000448012 HSP90AB1P08238 724 aaKnown RBP14.89□□□□□ -0.03
NPIPB3-202ENST00000448012 PLEKHO1Q53GL0 409 aaPredicted RBP14.89□□□□□ -0.03
NPIPB3-202ENST00000448012 PDGFDQ9GZP0 370 aaPredicted RBP14.89□□□□□ -0.03
NPIPB3-202ENST00000448012 TMOD3Q9NYL9 352 aa14.89□□□□□ -0.03
NPIPB3-202ENST00000448012 SRCAPQ6ZRS2 3230 aa14.88□□□□□ -0.03
NPIPB3-202ENST00000448012 RGPD2P0DJD1 1756 aa14.88□□□□□ -0.03
NPIPB3-202ENST00000448012 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
NPIPB3-202ENST00000448012 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
NPIPB3-202ENST00000448012 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
NPIPB3-202ENST00000448012 PALLDQ8WX93 1383 aa14.87□□□□□ -0.03
NPIPB3-202ENST00000448012 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
NPIPB3-202ENST00000448012 NKX1-1Q15270 411 aaPredicted RBP14.87□□□□□ -0.03
NPIPB3-202ENST00000448012 AMOTQ4VCS5 1084 aa14.87□□□□□ -0.03
NPIPB3-202ENST00000448012 DOT1LQ8TEK3 1739 aa14.86□□□□□ -0.03
NPIPB3-202ENST00000448012 NCAPD2Q15021 1401 aa14.86□□□□□ -0.03
NPIPB3-202ENST00000448012 PHKG2P15735 406 aa14.86□□□□□ -0.03
NPIPB3-202ENST00000448012 KCNQ4P56696 695 aa14.86□□□□□ -0.03
NPIPB3-202ENST00000448012 C1orf141Q5JVX7 400 aa14.86□□□□□ -0.03
NPIPB3-202ENST00000448012 ARXQ96QS3 562 aa14.86□□□□□ -0.03
NPIPB3-202ENST00000448012 IGSF1Q8N6C5 1336 aa14.86□□□□□ -0.03
NPIPB3-202ENST00000448012 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
NPIPB3-202ENST00000448012 FLAD1Q8NFF5 587 aa14.85□□□□□ -0.03
NPIPB3-202ENST00000448012 PTGER2P43116 358 aa14.84□□□□□ -0.03
NPIPB3-202ENST00000448012 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
NPIPB3-202ENST00000448012 CC2D1BQ5T0F9 858 aaKnown RBP14.84□□□□□ -0.03
NPIPB3-202ENST00000448012 ZNF530Q6P9A1 599 aaPredicted RBP14.84□□□□□ -0.03
NPIPB3-202ENST00000448012 AK7Q96M32 723 aa14.84□□□□□ -0.03
NPIPB3-202ENST00000448012 MAP2P11137 1827 aaKnown RBP14.83□□□□□ -0.04
NPIPB3-202ENST00000448012 SULT6B1Q6IMI4 303 aa14.83□□□□□ -0.04
NPIPB3-202ENST00000448012 KLHL34Q8N239 644 aa14.83□□□□□ -0.04
NPIPB3-202ENST00000448012 PIGBQ92521 554 aa14.83□□□□□ -0.04
NPIPB3-202ENST00000448012 DCAF5Q96JK2 942 aa14.83□□□□□ -0.04
NPIPB3-202ENST00000448012 PNPLA7Q6ZV29 1317 aa14.83□□□□□ -0.04
NPIPB3-202ENST00000448012 CASZ1Q86V15 1759 aa14.83□□□□□ -0.04
NPIPB3-202ENST00000448012 PAPPAQ13219 1627 aa14.82□□□□□ -0.04
NPIPB3-202ENST00000448012 MTHFSP49914 203 aa14.82□□□□□ -0.04
NPIPB3-202ENST00000448012 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
NPIPB3-202ENST00000448012 FHDC1Q9C0D6 1143 aaPredicted RBP14.82□□□□□ -0.04
NPIPB3-202ENST00000448012 SHANK3Q9BYB0 1731 aa14.82□□□□□ -0.04
NPIPB3-202ENST00000448012 ERVV-2B6SEH9 535 aa14.81□□□□□ -0.04
NPIPB3-202ENST00000448012 CABP4P57796 275 aa14.81□□□□□ -0.04
NPIPB3-202ENST00000448012 LOC102724428A0A0B4J2F2 783 aa14.8□□□□□ -0.04
NPIPB3-202ENST00000448012 DIAPH1O60610 1272 aaKnown RBP14.8□□□□□ -0.04
NPIPB3-202ENST00000448012 SIK1P57059 783 aa14.8□□□□□ -0.04
NPIPB3-202ENST00000448012 SYT17Q9BSW7 474 aa14.8□□□□□ -0.04
NPIPB3-202ENST00000448012 PKD1L3Q7Z443 1732 aa14.8□□□□□ -0.04
NPIPB3-202ENST00000448012 IL13P35225 146 aa14.79□□□□□ -0.04
NPIPB3-202ENST00000448012 ATP6V1AP38606 617 aa14.79□□□□□ -0.04
NPIPB3-202ENST00000448012 PER1O15534 1290 aaPredicted RBP14.78□□□□□ -0.04
NPIPB3-202ENST00000448012 YY1P25490 414 aa14.78□□□□□ -0.04
NPIPB3-202ENST00000448012 COL23A1Q86Y22 540 aaPredicted RBP14.78□□□□□ -0.04
NPIPB3-202ENST00000448012 AEBP1Q8IUX7 1158 aa14.78□□□□□ -0.04
NPIPB3-202ENST00000448012 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
NPIPB3-202ENST00000448012 SGIP1Q9BQI5 828 aa14.78□□□□□ -0.04
NPIPB3-202ENST00000448012 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
NPIPB3-202ENST00000448012 ASAP1Q9ULH1 1129 aa14.78□□□□□ -0.04
NPIPB3-202ENST00000448012 NPC1L1Q9UHC9 1359 aa14.77□□□□□ -0.04
NPIPB3-202ENST00000448012 LY75O60449 1722 aa14.76□□□□□ -0.05
NPIPB3-202ENST00000448012 PHF14O94880 888 aa14.76□□□□□ -0.05
NPIPB3-202ENST00000448012 ATG3Q9NT62 314 aa14.76□□□□□ -0.05
NPIPB3-202ENST00000448012 U2SURPO15042 1029 aaKnown RBP14.75□□□□□ -0.05
NPIPB3-202ENST00000448012 GNPATO15228 680 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms