RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
SSR4-205ENST00000447375 CAPN15O75808 1086 aa17.56■□□□□ 0.4
SSR4-205ENST00000447375 NFAT5O94916 1531 aa17.55■□□□□ 0.4
SSR4-205ENST00000447375 TUBGCP6Q96RT7 1819 aa17.54■□□□□ 0.4
SSR4-205ENST00000447375 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
SSR4-205ENST00000447375 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
SSR4-205ENST00000447375 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SSR4-205ENST00000447375 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
SSR4-205ENST00000447375 EVC2Q86UK5 1308 aa17.51■□□□□ 0.39
SSR4-205ENST00000447375 TOMM70O94826 608 aa17.51■□□□□ 0.39
SSR4-205ENST00000447375 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
SSR4-205ENST00000447375 SBNO2Q9Y2G9 1366 aa17.51■□□□□ 0.39
SSR4-205ENST00000447375 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
SSR4-205ENST00000447375 MON2Q7Z3U7 1717 aa17.49■□□□□ 0.39
SSR4-205ENST00000447375 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
SSR4-205ENST00000447375 PRELPP51888 382 aa17.48■□□□□ 0.39
SSR4-205ENST00000447375 TNS4Q8IZW8 715 aa17.47■□□□□ 0.39
SSR4-205ENST00000447375 NSD2O96028 1365 aa17.47■□□□□ 0.39
SSR4-205ENST00000447375 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
SSR4-205ENST00000447375 ST20-MTHFSA0A0A6YYL1 179 aa17.46■□□□□ 0.39
SSR4-205ENST00000447375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSR4-205ENST00000447375 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.39
SSR4-205ENST00000447375 LY75O60449 1722 aa17.46■□□□□ 0.39
SSR4-205ENST00000447375 SLC24A1O60721 1099 aa17.45■□□□□ 0.38
SSR4-205ENST00000447375 KLRG1Q96E93 195 aa17.45■□□□□ 0.38
SSR4-205ENST00000447375 TESK2Q96S53 571 aa17.45■□□□□ 0.38
SSR4-205ENST00000447375 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
SSR4-205ENST00000447375 USP47Q96K76 1375 aa17.44■□□□□ 0.38
SSR4-205ENST00000447375 LTN1O94822 1766 aa17.44■□□□□ 0.38
SSR4-205ENST00000447375 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
SSR4-205ENST00000447375 JMYQ8N9B5 988 aa17.43■□□□□ 0.38
SSR4-205ENST00000447375 NME9Q86XW9 330 aa17.42■□□□□ 0.38
SSR4-205ENST00000447375 ZCRB1Q8TBF4 217 aaKnown RBP17.42■□□□□ 0.38
SSR4-205ENST00000447375 LTV1Q96GA3 475 aaPredicted RBP17.42■□□□□ 0.38
SSR4-205ENST00000447375 PUS7Q96PZ0 661 aaKnown RBP17.42■□□□□ 0.38
SSR4-205ENST00000447375 HTRA3P83110 453 aa17.41■□□□□ 0.38
SSR4-205ENST00000447375 USP54Q70EL1 1684 aa17.41■□□□□ 0.38
SSR4-205ENST00000447375 NMRK2Q9NPI5 230 aa17.4■□□□□ 0.38
SSR4-205ENST00000447375 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
SSR4-205ENST00000447375 RBM46Q8TBY0 533 aaKnown RBP17.39■□□□□ 0.37
SSR4-205ENST00000447375 IP6K1Q92551 441 aa17.39■□□□□ 0.37
SSR4-205ENST00000447375 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
SSR4-205ENST00000447375 WDR90Q96KV7 1748 aa17.37■□□□□ 0.37
SSR4-205ENST00000447375 AK7Q96M32 723 aa17.36■□□□□ 0.37
SSR4-205ENST00000447375 PHF14O94880 888 aa17.35■□□□□ 0.37
SSR4-205ENST00000447375 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
SSR4-205ENST00000447375 C5P01031 1676 aa17.34■□□□□ 0.37
SSR4-205ENST00000447375 TMF1P82094 1093 aa17.34■□□□□ 0.37
SSR4-205ENST00000447375 FSTL1Q12841 308 aa17.34■□□□□ 0.37
SSR4-205ENST00000447375 ARHGAP27Q6ZUM4 889 aa17.34■□□□□ 0.37
SSR4-205ENST00000447375 CICQ96RK0 1608 aaPredicted RBP17.33■□□□□ 0.37
SSR4-205ENST00000447375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
SSR4-205ENST00000447375 SMIM5Q71RC9 77 aa17.33■□□□□ 0.36
SSR4-205ENST00000447375 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
SSR4-205ENST00000447375 BCS1LQ9Y276 419 aa17.33■□□□□ 0.36
SSR4-205ENST00000447375 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
SSR4-205ENST00000447375 PALLDQ8WX93 1383 aa17.32■□□□□ 0.36
SSR4-205ENST00000447375 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSR4-205ENST00000447375 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
SSR4-205ENST00000447375 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
SSR4-205ENST00000447375 HDGFL2Q7Z4V5 671 aaPredicted RBP17.31■□□□□ 0.36
SSR4-205ENST00000447375 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
SSR4-205ENST00000447375 MEGF6O75095 1541 aa17.31■□□□□ 0.36
SSR4-205ENST00000447375 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
SSR4-205ENST00000447375 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
SSR4-205ENST00000447375 HSPA5P11021 654 aaKnown RBP17.29■□□□□ 0.36
SSR4-205ENST00000447375 SSFA2P28290 1259 aa17.29■□□□□ 0.36
SSR4-205ENST00000447375 HOXC9P31274 260 aa17.29■□□□□ 0.36
SSR4-205ENST00000447375 TGFB2P61812 414 aa17.29■□□□□ 0.36
SSR4-205ENST00000447375 PCNTO95613 3336 aa17.29■□□□□ 0.36
SSR4-205ENST00000447375 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
SSR4-205ENST00000447375 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
SSR4-205ENST00000447375 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
SSR4-205ENST00000447375 AMPHP49418 695 aa17.28■□□□□ 0.36
SSR4-205ENST00000447375 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
SSR4-205ENST00000447375 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
SSR4-205ENST00000447375 C4BP0C0L5 1744 aa17.27■□□□□ 0.36
SSR4-205ENST00000447375 PXDNLA1KZ92 1463 aa17.27■□□□□ 0.36
SSR4-205ENST00000447375 C9orf131Q5VYM1 1079 aa17.27■□□□□ 0.36
SSR4-205ENST00000447375 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
SSR4-205ENST00000447375 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
SSR4-205ENST00000447375 SLC34A2O95436 690 aa17.26■□□□□ 0.35
SSR4-205ENST00000447375 MMP10P09238 476 aa17.26■□□□□ 0.35
SSR4-205ENST00000447375 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
SSR4-205ENST00000447375 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
SSR4-205ENST00000447375 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
SSR4-205ENST00000447375 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
SSR4-205ENST00000447375 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
SSR4-205ENST00000447375 EDC4Q6P2E9 1401 aaKnown RBP17.26■□□□□ 0.35
SSR4-205ENST00000447375 MAP3K19Q56UN5 1328 aa17.25■□□□□ 0.35
SSR4-205ENST00000447375 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
SSR4-205ENST00000447375 FCHSD2O94868 740 aa17.25■□□□□ 0.35
SSR4-205ENST00000447375 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
SSR4-205ENST00000447375 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
SSR4-205ENST00000447375 FBLN1P23142 703 aa17.24■□□□□ 0.35
SSR4-205ENST00000447375 USHBP1Q8N6Y0 703 aa17.24■□□□□ 0.35
SSR4-205ENST00000447375 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
SSR4-205ENST00000447375 PCDH11XQ9BZA7 1347 aa17.23■□□□□ 0.35
SSR4-205ENST00000447375 PCDH11YQ9BZA8 1340 aa17.23■□□□□ 0.35
SSR4-205ENST00000447375 DPEP1P16444 411 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms