RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 VIRMAQ69YN4 1812 aaKnown RBP16.12■□□□□ 0.17
RFC4-208ENST00000447345 TOGARAM1Q9Y4F4 1720 aa16.12■□□□□ 0.17
RFC4-208ENST00000447345 DEFB132Q7Z7B7 95 aa16.12■□□□□ 0.17
RFC4-208ENST00000447345 DDX54Q8TDD1 881 aaKnown RBP16.12■□□□□ 0.17
RFC4-208ENST00000447345 CCDC125Q86Z20 511 aa16.11■□□□□ 0.17
RFC4-208ENST00000447345 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
RFC4-208ENST00000447345 ITGB4P16144 1822 aa16.1■□□□□ 0.17
RFC4-208ENST00000447345 PPP2R1AP30153 589 aa16.1■□□□□ 0.17
RFC4-208ENST00000447345 ZCRB1Q8TBF4 217 aaKnown RBP16.1■□□□□ 0.17
RFC4-208ENST00000447345 RREB1Q92766 1687 aa16.1■□□□□ 0.17
RFC4-208ENST00000447345 PARD3Q8TEW0 1356 aa16.1■□□□□ 0.17
RFC4-208ENST00000447345 RGPD3A6NKT7 1758 aaPredicted RBP16.09■□□□□ 0.17
RFC4-208ENST00000447345 RGPD4Q7Z3J3 1758 aa16.09■□□□□ 0.17
RFC4-208ENST00000447345 ZNF316A6NFI3 1004 aaPredicted RBP16.09■□□□□ 0.17
RFC4-208ENST00000447345 IL13P35225 146 aa16.09■□□□□ 0.17
RFC4-208ENST00000447345 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
RFC4-208ENST00000447345 ACSBG1Q96GR2 724 aa16.09■□□□□ 0.17
RFC4-208ENST00000447345 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.17
RFC4-208ENST00000447345 PTF1AQ7RTS3 328 aa16.08■□□□□ 0.16
RFC4-208ENST00000447345 DIAPH1O60610 1272 aaKnown RBP16.07■□□□□ 0.16
RFC4-208ENST00000447345 BAG6P46379 1132 aa16.07■□□□□ 0.16
RFC4-208ENST00000447345 PCDH11XQ9BZA7 1347 aa16.07■□□□□ 0.16
RFC4-208ENST00000447345 PCDH11YQ9BZA8 1340 aa16.07■□□□□ 0.16
RFC4-208ENST00000447345 BCL9O00512 1426 aa16.07■□□□□ 0.16
RFC4-208ENST00000447345 APBA3O96018 575 aa16.06■□□□□ 0.16
RFC4-208ENST00000447345 EN1Q05925 392 aaPredicted RBP16.06■□□□□ 0.16
RFC4-208ENST00000447345 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
RFC4-208ENST00000447345 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
RFC4-208ENST00000447345 HMOX1P09601 288 aa16.05■□□□□ 0.16
RFC4-208ENST00000447345 CFAP53Q96M91 514 aa16.05■□□□□ 0.16
RFC4-208ENST00000447345 KDRP35968 1356 aa16.04■□□□□ 0.16
RFC4-208ENST00000447345 KCNQ2O43526 872 aa16.04■□□□□ 0.16
RFC4-208ENST00000447345 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
RFC4-208ENST00000447345 CYP27B1O15528 508 aa16.03■□□□□ 0.16
RFC4-208ENST00000447345 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
RFC4-208ENST00000447345 SCN11AQ9UI33 1791 aa16.03■□□□□ 0.16
RFC4-208ENST00000447345 EZH2Q15910 746 aaKnown RBP16.02■□□□□ 0.16
RFC4-208ENST00000447345 BCL11BQ9C0K0 894 aaPredicted RBP16.02■□□□□ 0.16
RFC4-208ENST00000447345 LY75O60449 1722 aa16.01■□□□□ 0.15
RFC4-208ENST00000447345 RALBP1Q15311 655 aa16■□□□□ 0.15
RFC4-208ENST00000447345 PRIM1P49642 420 aaKnown RBP15.99■□□□□ 0.15
RFC4-208ENST00000447345 PLEKHO1Q53GL0 409 aaPredicted RBP15.99■□□□□ 0.15
RFC4-208ENST00000447345 ZNF530Q6P9A1 599 aaPredicted RBP15.99■□□□□ 0.15
RFC4-208ENST00000447345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.99■□□□□ 0.153e-9■□□□□ 9.5
RFC4-208ENST00000447345 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
RFC4-208ENST00000447345 PHKG2P15735 406 aa15.98■□□□□ 0.15
RFC4-208ENST00000447345 CAMKK2Q96RR4 588 aa15.98■□□□□ 0.15
RFC4-208ENST00000447345 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
RFC4-208ENST00000447345 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
RFC4-208ENST00000447345 IFNL2Q8IZJ0 200 aa15.97■□□□□ 0.15
RFC4-208ENST00000447345 NUDCQ9Y266 331 aa15.97■□□□□ 0.15
RFC4-208ENST00000447345 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
RFC4-208ENST00000447345 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
RFC4-208ENST00000447345 AMOTQ4VCS5 1084 aa15.96■□□□□ 0.15
RFC4-208ENST00000447345 KDM6AO15550 1401 aaPredicted RBP15.95■□□□□ 0.14
RFC4-208ENST00000447345 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
RFC4-208ENST00000447345 MPRIPQ6WCQ1 1025 aa15.95■□□□□ 0.14
RFC4-208ENST00000447345 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
RFC4-208ENST00000447345 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
RFC4-208ENST00000447345 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
RFC4-208ENST00000447345 C5P01031 1676 aa15.94■□□□□ 0.14
RFC4-208ENST00000447345 TUBGCP6Q96RT7 1819 aa15.94■□□□□ 0.14
RFC4-208ENST00000447345 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
RFC4-208ENST00000447345 ADAMTS7Q9UKP4 1686 aa15.93■□□□□ 0.14
RFC4-208ENST00000447345 PLSCR1O15162 318 aa15.93■□□□□ 0.14
RFC4-208ENST00000447345 NKX1-1Q15270 411 aaPredicted RBP15.93■□□□□ 0.14
RFC4-208ENST00000447345 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
RFC4-208ENST00000447345 TXNRD1Q16881 649 aa15.92■□□□□ 0.14
RFC4-208ENST00000447345 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
RFC4-208ENST00000447345 SIPA1L3O60292 1781 aaPredicted RBP15.91■□□□□ 0.14
RFC4-208ENST00000447345 PSDA5PKW4 1024 aaPredicted RBP15.91■□□□□ 0.14
RFC4-208ENST00000447345 TMOD3Q9NYL9 352 aa15.91■□□□□ 0.14
RFC4-208ENST00000447345 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
RFC4-208ENST00000447345 PROM2Q8N271 834 aa15.9■□□□□ 0.14
RFC4-208ENST00000447345 DCAF5Q96JK2 942 aa15.9■□□□□ 0.14
RFC4-208ENST00000447345 PALLDQ8WX93 1383 aa15.89■□□□□ 0.13
RFC4-208ENST00000447345 KCNQ4P56696 695 aa15.89■□□□□ 0.13
RFC4-208ENST00000447345 AKAP4Q5JQC9 854 aa15.89■□□□□ 0.13
RFC4-208ENST00000447345 PIGBQ92521 554 aa15.89■□□□□ 0.13
RFC4-208ENST00000447345 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
RFC4-208ENST00000447345 MAP3K5Q99683 1374 aa15.88■□□□□ 0.13
RFC4-208ENST00000447345 R3HDM1Q15032 1099 aaKnown RBP15.88■□□□□ 0.13
RFC4-208ENST00000447345 MRC1P22897 1456 aa15.88■□□□□ 0.13
RFC4-208ENST00000447345 ANP32CO43423 234 aa15.87■□□□□ 0.13
RFC4-208ENST00000447345 CABP4P57796 275 aa15.87■□□□□ 0.13
RFC4-208ENST00000447345 GAS2L2Q8NHY3 880 aa15.87■□□□□ 0.13
RFC4-208ENST00000447345 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
RFC4-208ENST00000447345 QSER1Q2KHR3 1735 aa15.86■□□□□ 0.13
RFC4-208ENST00000447345 CASZ1Q86V15 1759 aa15.86■□□□□ 0.13
RFC4-208ENST00000447345 FCHSD2O94868 740 aa15.86■□□□□ 0.13
RFC4-208ENST00000447345 NBPF14Q5TI25 921 aa15.86■□□□□ 0.13
RFC4-208ENST00000447345 LGR6Q9HBX8 967 aa15.86■□□□□ 0.13
RFC4-208ENST00000447345 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
RFC4-208ENST00000447345 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
RFC4-208ENST00000447345 C4BP0C0L5 1744 aa15.85■□□□□ 0.13
RFC4-208ENST00000447345 COL5A3P25940 1745 aaPredicted RBP15.85■□□□□ 0.13
RFC4-208ENST00000447345 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
RFC4-208ENST00000447345 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
RFC4-208ENST00000447345 ASAP1Q9ULH1 1129 aa15.85■□□□□ 0.13
RFC4-208ENST00000447345 TJP1Q07157 1748 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms