RNA–Protein interactions for RNA: ENST00000446989.1

LINC01054-201, Transcript of long intergenic non-protein coding RNA 1054, humanhuman

TSL 3 BASIC

Gene LINC01054, Length 514 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01054-201ENST00000446989 TRIM37O94972 964 aa12.9□□□□□ -0.34
LINC01054-201ENST00000446989 MARCH10Q8NA82 808 aaPredicted RBP12.9□□□□□ -0.34
LINC01054-201ENST00000446989 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.34
LINC01054-201ENST00000446989 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
LINC01054-201ENST00000446989 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
LINC01054-201ENST00000446989 DEFB132Q7Z7B7 95 aa12.89□□□□□ -0.35
LINC01054-201ENST00000446989 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
LINC01054-201ENST00000446989 EYA1Q99502 592 aa12.89□□□□□ -0.35
LINC01054-201ENST00000446989 BTAF1O14981 1849 aa12.89□□□□□ -0.35
LINC01054-201ENST00000446989 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
LINC01054-201ENST00000446989 MTHFSP49914 203 aa12.88□□□□□ -0.35
LINC01054-201ENST00000446989 POTEHQ6S545 545 aa12.88□□□□□ -0.35
LINC01054-201ENST00000446989 RREB1Q92766 1687 aa12.87□□□□□ -0.35
LINC01054-201ENST00000446989 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
LINC01054-201ENST00000446989 VIRMAQ69YN4 1812 aaKnown RBP12.87□□□□□ -0.35
LINC01054-201ENST00000446989 IGSF1Q8N6C5 1336 aa12.87□□□□□ -0.35
LINC01054-201ENST00000446989 RGPD3A6NKT7 1758 aaPredicted RBP12.86□□□□□ -0.35
LINC01054-201ENST00000446989 RGPD4Q7Z3J3 1758 aa12.86□□□□□ -0.35
LINC01054-201ENST00000446989 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
LINC01054-201ENST00000446989 ITGB4P16144 1822 aa12.86□□□□□ -0.35
LINC01054-201ENST00000446989 NUP188Q5SRE5 1749 aa12.86□□□□□ -0.35
LINC01054-201ENST00000446989 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
LINC01054-201ENST00000446989 BAG6P46379 1132 aa12.86□□□□□ -0.35
LINC01054-201ENST00000446989 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
LINC01054-201ENST00000446989 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
LINC01054-201ENST00000446989 APBA3O96018 575 aa12.85□□□□□ -0.35
LINC01054-201ENST00000446989 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
LINC01054-201ENST00000446989 BCL9O00512 1426 aa12.84□□□□□ -0.35
LINC01054-201ENST00000446989 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
LINC01054-201ENST00000446989 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
LINC01054-201ENST00000446989 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
LINC01054-201ENST00000446989 IL13P35225 146 aa12.83□□□□□ -0.36
LINC01054-201ENST00000446989 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
LINC01054-201ENST00000446989 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
LINC01054-201ENST00000446989 PARD3Q8TEW0 1356 aa12.82□□□□□ -0.36
LINC01054-201ENST00000446989 DIAPH1O60610 1272 aaKnown RBP12.82□□□□□ -0.36
LINC01054-201ENST00000446989 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
LINC01054-201ENST00000446989 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
LINC01054-201ENST00000446989 KCNQ2O43526 872 aa12.81□□□□□ -0.36
LINC01054-201ENST00000446989 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
LINC01054-201ENST00000446989 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
LINC01054-201ENST00000446989 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
LINC01054-201ENST00000446989 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
LINC01054-201ENST00000446989 U2SURPO15042 1029 aaKnown RBP12.8□□□□□ -0.36
LINC01054-201ENST00000446989 CYP27B1O15528 508 aa12.8□□□□□ -0.36
LINC01054-201ENST00000446989 HMOX1P09601 288 aa12.8□□□□□ -0.36
LINC01054-201ENST00000446989 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
LINC01054-201ENST00000446989 KDRP35968 1356 aa12.8□□□□□ -0.36
LINC01054-201ENST00000446989 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
LINC01054-201ENST00000446989 CAMKK2Q96RR4 588 aa12.78□□□□□ -0.36
LINC01054-201ENST00000446989 LY75O60449 1722 aa12.78□□□□□ -0.36
LINC01054-201ENST00000446989 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
LINC01054-201ENST00000446989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC01054-201ENST00000446989 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
LINC01054-201ENST00000446989 PHKG2P15735 406 aa12.76□□□□□ -0.37
LINC01054-201ENST00000446989 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
LINC01054-201ENST00000446989 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
LINC01054-201ENST00000446989 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
LINC01054-201ENST00000446989 PLSCR1O15162 318 aa12.75□□□□□ -0.37
LINC01054-201ENST00000446989 RALBP1Q15311 655 aa12.75□□□□□ -0.37
LINC01054-201ENST00000446989 TAF1LQ8IZX4 1826 aa12.74□□□□□ -0.37
LINC01054-201ENST00000446989 AMOTQ4VCS5 1084 aa12.74□□□□□ -0.37
LINC01054-201ENST00000446989 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
LINC01054-201ENST00000446989 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
LINC01054-201ENST00000446989 DLG5Q8TDM6 1919 aa12.74□□□□□ -0.37
LINC01054-201ENST00000446989 C5P01031 1676 aa12.73□□□□□ -0.37
LINC01054-201ENST00000446989 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
LINC01054-201ENST00000446989 MYBBP1AQ9BQG0 1328 aaKnown RBP12.73□□□□□ -0.37
LINC01054-201ENST00000446989 PSDA5PKW4 1024 aaPredicted RBP12.73□□□□□ -0.37
LINC01054-201ENST00000446989 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
LINC01054-201ENST00000446989 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01054-201ENST00000446989 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
LINC01054-201ENST00000446989 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
LINC01054-201ENST00000446989 TUBGCP6Q96RT7 1819 aa12.73□□□□□ -0.37
LINC01054-201ENST00000446989 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
LINC01054-201ENST00000446989 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
LINC01054-201ENST00000446989 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
LINC01054-201ENST00000446989 PRKAR2BP31323 418 aa12.71□□□□□ -0.37
LINC01054-201ENST00000446989 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
LINC01054-201ENST00000446989 PRKRIP1Q9H875 184 aaPredicted RBP12.71□□□□□ -0.37
LINC01054-201ENST00000446989 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
LINC01054-201ENST00000446989 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
LINC01054-201ENST00000446989 HSP90AB1P08238 724 aaKnown RBP12.7□□□□□ -0.38
LINC01054-201ENST00000446989 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
LINC01054-201ENST00000446989 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
LINC01054-201ENST00000446989 PROM2Q8N271 834 aa12.7□□□□□ -0.38
LINC01054-201ENST00000446989 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
LINC01054-201ENST00000446989 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
LINC01054-201ENST00000446989 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
LINC01054-201ENST00000446989 KCNQ4P56696 695 aa12.69□□□□□ -0.38
LINC01054-201ENST00000446989 AKAP4Q5JQC9 854 aa12.69□□□□□ -0.38
LINC01054-201ENST00000446989 NBPF14Q5TI25 921 aa12.69□□□□□ -0.38
LINC01054-201ENST00000446989 PIGBQ92521 554 aa12.69□□□□□ -0.38
LINC01054-201ENST00000446989 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
LINC01054-201ENST00000446989 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
LINC01054-201ENST00000446989 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
LINC01054-201ENST00000446989 QSER1Q2KHR3 1735 aa12.68□□□□□ -0.38
LINC01054-201ENST00000446989 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
LINC01054-201ENST00000446989 MRC1P22897 1456 aa12.67□□□□□ -0.38
LINC01054-201ENST00000446989 CABP4P57796 275 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms