RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
COL6A4P1-201ENST00000446690 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
COL6A4P1-201ENST00000446690 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
COL6A4P1-201ENST00000446690 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
COL6A4P1-201ENST00000446690 C1orf167Q5SNV9 1468 aa12.09□□□□□ -0.47
COL6A4P1-201ENST00000446690 LRRC59Q96AG4 307 aaKnown RBP12.09□□□□□ -0.47
COL6A4P1-201ENST00000446690 ARHGAP45Q92619 1136 aa12.09□□□□□ -0.47
COL6A4P1-201ENST00000446690 NWD1Q149M9 1564 aa12.08□□□□□ -0.48
COL6A4P1-201ENST00000446690 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
COL6A4P1-201ENST00000446690 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
COL6A4P1-201ENST00000446690 ZBTB40Q9NUA8 1239 aa12.08□□□□□ -0.48
COL6A4P1-201ENST00000446690 CRB1P82279 1406 aa12.08□□□□□ -0.48
COL6A4P1-201ENST00000446690 FAM161AQ3B820 660 aa12.08□□□□□ -0.48
COL6A4P1-201ENST00000446690 PDZRN3Q9UPQ7 1066 aa12.08□□□□□ -0.48
COL6A4P1-201ENST00000446690 MARF1Q9Y4F3 1742 aaKnown RBP12.07□□□□□ -0.48
COL6A4P1-201ENST00000446690 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
COL6A4P1-201ENST00000446690 ZC3H6P61129 1189 aaKnown RBP12.07□□□□□ -0.48
COL6A4P1-201ENST00000446690 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
COL6A4P1-201ENST00000446690 API5Q9BZZ5 524 aaKnown RBP12.06□□□□□ -0.48
COL6A4P1-201ENST00000446690 KDM4FA0A1W2PPD8 638 aa12.06□□□□□ -0.48
COL6A4P1-201ENST00000446690 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
COL6A4P1-201ENST00000446690 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
COL6A4P1-201ENST00000446690 IL17REQ8NFR9 667 aa12.06□□□□□ -0.48
COL6A4P1-201ENST00000446690 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
COL6A4P1-201ENST00000446690 ZBTB7BO15156 539 aaPredicted RBP12.05□□□□□ -0.48
COL6A4P1-201ENST00000446690 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
COL6A4P1-201ENST00000446690 C8orf34Q49A92 452 aa12.05□□□□□ -0.48
COL6A4P1-201ENST00000446690 ANKRD24Q8TF21 1146 aa12.05□□□□□ -0.48
COL6A4P1-201ENST00000446690 NFAT5O94916 1531 aa12.05□□□□□ -0.48
COL6A4P1-201ENST00000446690 IPO9Q96P70 1041 aaKnown RBP12.05□□□□□ -0.48
COL6A4P1-201ENST00000446690 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
COL6A4P1-201ENST00000446690 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
COL6A4P1-201ENST00000446690 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
COL6A4P1-201ENST00000446690 CHMP4BQ9H444 224 aaKnown RBP12.04□□□□□ -0.48
COL6A4P1-201ENST00000446690 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
COL6A4P1-201ENST00000446690 MAP3K5Q99683 1374 aa12.04□□□□□ -0.48
COL6A4P1-201ENST00000446690 CABLES1Q8TDN4 633 aa12.04□□□□□ -0.48
COL6A4P1-201ENST00000446690 TAF7Q15545 349 aaPredicted RBP12.03□□□□□ -0.48
COL6A4P1-201ENST00000446690 ABCC4O15439 1325 aa12.03□□□□□ -0.48
COL6A4P1-201ENST00000446690 MST1RQ04912 1400 aa12.03□□□□□ -0.48
COL6A4P1-201ENST00000446690 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
COL6A4P1-201ENST00000446690 LTN1O94822 1766 aa12.03□□□□□ -0.48
COL6A4P1-201ENST00000446690 MSH6P52701 1360 aa12.03□□□□□ -0.48
COL6A4P1-201ENST00000446690 USP19O94966 1318 aa12.02□□□□□ -0.49
COL6A4P1-201ENST00000446690 LGR6Q9HBX8 967 aa12.02□□□□□ -0.49
COL6A4P1-201ENST00000446690 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
COL6A4P1-201ENST00000446690 PLEKHO1Q53GL0 409 aaPredicted RBP12.02□□□□□ -0.49
COL6A4P1-201ENST00000446690 ZNF530Q6P9A1 599 aaPredicted RBP12.02□□□□□ -0.49
COL6A4P1-201ENST00000446690 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
COL6A4P1-201ENST00000446690 STK31Q9BXU1 1019 aa12.01□□□□□ -0.49
COL6A4P1-201ENST00000446690 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
COL6A4P1-201ENST00000446690 SLC4A10Q6U841 1118 aa12□□□□□ -0.49
COL6A4P1-201ENST00000446690 MPRIPQ6WCQ1 1025 aa12□□□□□ -0.49
COL6A4P1-201ENST00000446690 G2E3Q7L622 706 aa12□□□□□ -0.49
COL6A4P1-201ENST00000446690 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
COL6A4P1-201ENST00000446690 STRCP1A6NGW2 1772 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 PTPRCP08575 1304 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 NLRP2Q9NX02 1062 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 NCOA3Q9Y6Q9 1424 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 SLIT3O75094 1523 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 F6X3S4 739 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 TEFQ10587 303 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 CHRNA2Q15822 529 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 AMOTQ4VCS5 1084 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 CCDC30Q5VVM6 783 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 SMC5Q8IY18 1101 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 DCCP43146 1447 aa11.99□□□□□ -0.49
COL6A4P1-201ENST00000446690 LNPKQ9C0E8 428 aa11.98□□□□□ -0.49
COL6A4P1-201ENST00000446690 KIF1AQ12756 1690 aa11.98□□□□□ -0.49
COL6A4P1-201ENST00000446690 ANKRD45Q5TZF3 282 aa11.98□□□□□ -0.49
COL6A4P1-201ENST00000446690 BTBD11A6QL63 1104 aa11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 EIF2S2P20042 333 aaKnown RBP11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 BRINP3Q76B58 766 aa11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 TRPM3Q9HCF6 1732 aaPredicted RBP11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 ERBB3P21860 1342 aa11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 PRKCSHP14314 528 aaPredicted RBP11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 NUCB1Q02818 461 aa11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 FKBP5Q13451 457 aaPredicted RBP11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
COL6A4P1-201ENST00000446690 KCNQ3O43525 872 aa11.96□□□□□ -0.49
COL6A4P1-201ENST00000446690 SEC24BO95487 1268 aa11.96□□□□□ -0.49
COL6A4P1-201ENST00000446690 HDGFL1Q5TGJ6 251 aa11.96□□□□□ -0.49
COL6A4P1-201ENST00000446690 CHD1LQ86WJ1 897 aa11.96□□□□□ -0.49
COL6A4P1-201ENST00000446690 RAPGEF4Q8WZA2 1011 aa11.96□□□□□ -0.49
COL6A4P1-201ENST00000446690 SLAIN2Q9P270 581 aa11.96□□□□□ -0.49
COL6A4P1-201ENST00000446690 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
COL6A4P1-201ENST00000446690 GCC1Q96CN9 775 aa11.95□□□□□ -0.5
COL6A4P1-201ENST00000446690 SPATA31A3Q5VYP0 1347 aa11.95□□□□□ -0.5
COL6A4P1-201ENST00000446690 CEMIPQ8WUJ3 1361 aa11.95□□□□□ -0.5
COL6A4P1-201ENST00000446690 FLIIQ13045 1269 aa11.95□□□□□ -0.5
COL6A4P1-201ENST00000446690 MEIS3Q99687 375 aa11.95□□□□□ -0.5
COL6A4P1-201ENST00000446690 RGS12O14924 1447 aa11.95□□□□□ -0.5
COL6A4P1-201ENST00000446690 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
COL6A4P1-201ENST00000446690 TNS3Q68CZ2 1445 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms