RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 ANKRD30BQ9BXX2 1392 aa8.73□□□□□ -1.01
HMGN1P36-201ENST00000446623 TNS3Q68CZ2 1445 aa8.72□□□□□ -1.01
HMGN1P36-201ENST00000446623 PHF14O94880 888 aa8.72□□□□□ -1.01
HMGN1P36-201ENST00000446623 VPS72Q15906 364 aa8.72□□□□□ -1.01
HMGN1P36-201ENST00000446623 KRT28Q7Z3Y7 464 aa8.72□□□□□ -1.01
HMGN1P36-201ENST00000446623 PIK3C2GO75747 1445 aa8.71□□□□□ -1.01
HMGN1P36-201ENST00000446623 YTHDC2Q9H6S0 1430 aaKnown RBP8.71□□□□□ -1.01
HMGN1P36-201ENST00000446623 GRXCR2A6NFK2 248 aa8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 SPDYE16A6NNV3 312 aaPredicted RBP8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 PTPREP23469 700 aa8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 SF3B2Q13435 895 aaKnown RBP8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 RGL3Q3MIN7 710 aa8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 TYW1BQ6NUM6 668 aa8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 ADGRD1Q6QNK2 874 aa8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
HMGN1P36-201ENST00000446623 NBR1Q14596 966 aa8.7□□□□□ -1.02
HMGN1P36-201ENST00000446623 KRT27Q7Z3Y8 459 aa8.7□□□□□ -1.02
HMGN1P36-201ENST00000446623 ARIH1Q9Y4X5 557 aaPredicted RBP8.7□□□□□ -1.02
HMGN1P36-201ENST00000446623 PTGER2P43116 358 aa8.69□□□□□ -1.02
HMGN1P36-201ENST00000446623 PSME1Q06323 249 aa8.69□□□□□ -1.02
HMGN1P36-201ENST00000446623 CCDC9Q9Y3X0 531 aaKnown RBP8.69□□□□□ -1.02
HMGN1P36-201ENST00000446623 SBNO1A3KN83 1393 aa8.69□□□□□ -1.02
HMGN1P36-201ENST00000446623 ARHGEF10O15013 1369 aa8.69□□□□□ -1.02
HMGN1P36-201ENST00000446623 NRXN1Q9ULB1 1477 aa8.69□□□□□ -1.02
HMGN1P36-201ENST00000446623 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
HMGN1P36-201ENST00000446623 FAM83GA6ND36 823 aa8.68□□□□□ -1.02
HMGN1P36-201ENST00000446623 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
HMGN1P36-201ENST00000446623 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
HMGN1P36-201ENST00000446623 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
HMGN1P36-201ENST00000446623 EPAS1Q99814 870 aa8.68□□□□□ -1.02
HMGN1P36-201ENST00000446623 RGPD1P0DJD0 1748 aa8.67□□□□□ -1.02
HMGN1P36-201ENST00000446623 HRCP23327 699 aa8.67□□□□□ -1.02
HMGN1P36-201ENST00000446623 KDM2AQ9Y2K7 1162 aa8.67□□□□□ -1.02
HMGN1P36-201ENST00000446623 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 A0A0G2JS52 829 aa8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 COL9A1P20849 921 aa8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 BAG6P46379 1132 aa8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 MYT1Q01538 1121 aa8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 FAM98CQ17RN3 349 aaKnown RBP8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 ARHGEF1Q92888 912 aaKnown RBP8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 RNF166Q96A37 237 aaPredicted RBP8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 MPHOSPH9Q99550 1183 aa8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 C14orf93Q9H972 538 aaKnown RBP8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 VPS9D1Q9Y2B5 631 aa8.66□□□□□ -1.02
HMGN1P36-201ENST00000446623 ALS2Q96Q42 1657 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 ANKARQ7Z5J8 1434 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 DHX57Q6P158 1386 aaKnown RBP8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 TK2O00142 265 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 MAP3K7O43318 606 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 SAFB2Q14151 953 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 CFAP70Q5T0N1 1121 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 C6orf132Q5T0Z8 1188 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 PMFBP1Q8TBY8 1022 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 PRAM1Q96QH2 718 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 BTG4Q9NY30 223 aa8.65□□□□□ -1.02
HMGN1P36-201ENST00000446623 TNS1Q9HBL0 1735 aaKnown RBP8.65□□□□□ -1.03
HMGN1P36-201ENST00000446623 ADGRB2O60241 1585 aa8.65□□□□□ -1.03
HMGN1P36-201ENST00000446623 DLC1Q96QB1 1528 aa8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 CRYBG1Q9Y4K1 1723 aa8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 PRIM1P49642 420 aaKnown RBP8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 EN1Q05925 392 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 ZBED2Q9BTP6 218 aa8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 THSD7AQ9UPZ6 1657 aa8.64□□□□□ -1.03
HMGN1P36-201ENST00000446623 SPATA31A5Q5VU36 1347 aa8.63□□□□□ -1.03
HMGN1P36-201ENST00000446623 SPATA31A7Q8IWB4 1347 aa8.63□□□□□ -1.03
HMGN1P36-201ENST00000446623 PPP1R3GB7ZBB8 358 aa8.63□□□□□ -1.03
HMGN1P36-201ENST00000446623 HRO43593 1189 aa8.63□□□□□ -1.03
HMGN1P36-201ENST00000446623 POGKQ9P215 609 aa8.63□□□□□ -1.03
HMGN1P36-201ENST00000446623 DISP2A7MBM2 1401 aa8.63□□□□□ -1.03
HMGN1P36-201ENST00000446623 GPRASP1Q5JY77 1395 aa8.62□□□□□ -1.03
HMGN1P36-201ENST00000446623 ADGRB1O14514 1584 aa8.62□□□□□ -1.03
HMGN1P36-201ENST00000446623 MLLT3P42568 568 aaPredicted RBP8.62□□□□□ -1.03
HMGN1P36-201ENST00000446623 R3HDM1Q15032 1099 aaKnown RBP8.62□□□□□ -1.03
HMGN1P36-201ENST00000446623 STAC3Q96MF2 364 aa8.62□□□□□ -1.03
HMGN1P36-201ENST00000446623 PRR36Q9H6K5 1346 aa8.61□□□□□ -1.03
HMGN1P36-201ENST00000446623 ACIN1Q9UKV3 1341 aaKnown RBP8.61□□□□□ -1.03
HMGN1P36-201ENST00000446623 TULP4Q9NRJ4 1543 aa8.61□□□□□ -1.03
HMGN1P36-201ENST00000446623 OSBPP22059 807 aa8.61□□□□□ -1.03
HMGN1P36-201ENST00000446623 HIRIP3Q9BW71 556 aaPredicted RBP8.61□□□□□ -1.03
HMGN1P36-201ENST00000446623 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
HMGN1P36-201ENST00000446623 EZH2Q15910 746 aaKnown RBP8.6□□□□□ -1.03
HMGN1P36-201ENST00000446623 EIF3AQ14152 1382 aaKnown RBP8.6□□□□□ -1.03
HMGN1P36-201ENST00000446623 SEMA3EO15041 775 aa8.59□□□□□ -1.03
HMGN1P36-201ENST00000446623 CAMKK2Q96RR4 588 aa8.59□□□□□ -1.03
HMGN1P36-201ENST00000446623 SLC4A5Q9BY07 1137 aa8.59□□□□□ -1.03
HMGN1P36-201ENST00000446623 PRDM11Q9NQV5 511 aa8.59□□□□□ -1.03
HMGN1P36-201ENST00000446623 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
HMGN1P36-201ENST00000446623 PHRF1Q9P1Y6 1649 aaKnown RBP8.58□□□□□ -1.04
HMGN1P36-201ENST00000446623 SPATA31A1Q5TZJ5 1347 aa8.58□□□□□ -1.04
HMGN1P36-201ENST00000446623 ITSN1Q15811 1721 aa8.58□□□□□ -1.04
HMGN1P36-201ENST00000446623 WASLO00401 505 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P36-201ENST00000446623 NGDNQ8NEJ9 315 aaKnown RBP8.58□□□□□ -1.04
HMGN1P36-201ENST00000446623 CDHR5Q9HBB8 845 aa8.58□□□□□ -1.04
HMGN1P36-201ENST00000446623 RREB1Q92766 1687 aa8.58□□□□□ -1.04
HMGN1P36-201ENST00000446623 PARD3Q8TEW0 1356 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms