RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 CFAP44Q96MT7 982 aa20.15■□□□□ 0.82
HDAC11-214ENST00000446613 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.14■□□□□ 0.82
HDAC11-214ENST00000446613 MEIS3Q99687 375 aa20.14■□□□□ 0.82
HDAC11-214ENST00000446613 NOL7Q9UMY1 257 aaKnown RBP20.14■□□□□ 0.82
HDAC11-214ENST00000446613 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.82
HDAC11-214ENST00000446613 CEP85Q6P2H3 762 aa20.13■□□□□ 0.81
HDAC11-214ENST00000446613 PDLIM2Q96JY6 352 aa20.13■□□□□ 0.81
HDAC11-214ENST00000446613 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
HDAC11-214ENST00000446613 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
HDAC11-214ENST00000446613 ATP10DQ9P241 1426 aa20.13■□□□□ 0.81
HDAC11-214ENST00000446613 ST18O60284 1047 aa20.12■□□□□ 0.81
HDAC11-214ENST00000446613 TPRNQ4KMQ1 711 aa20.12■□□□□ 0.81
HDAC11-214ENST00000446613 ANKRD44Q8N8A2 993 aa20.12■□□□□ 0.81
HDAC11-214ENST00000446613 PIK3C2BO00750 1634 aa20.12■□□□□ 0.81
HDAC11-214ENST00000446613 ZFYVE9O95405 1425 aa20.11■□□□□ 0.81
HDAC11-214ENST00000446613 POGZQ7Z3K3 1410 aa20.11■□□□□ 0.81
HDAC11-214ENST00000446613 FBXO31Q5XUX0 539 aaPredicted RBP20.11■□□□□ 0.81
HDAC11-214ENST00000446613 AEBP1Q8IUX7 1158 aa20.11■□□□□ 0.81
HDAC11-214ENST00000446613 MSH6P52701 1360 aa20.11■□□□□ 0.81
HDAC11-214ENST00000446613 NEK4P51957 841 aa20.1■□□□□ 0.81
HDAC11-214ENST00000446613 UQCRHLA0A096LP55 91 aa20.1■□□□□ 0.81
HDAC11-214ENST00000446613 UQCRHP07919 91 aa20.1■□□□□ 0.81
HDAC11-214ENST00000446613 MCM10Q7L590 875 aa20.09■□□□□ 0.81
HDAC11-214ENST00000446613 GDPD2Q9HCC8 539 aa20.09■□□□□ 0.81
HDAC11-214ENST00000446613 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
HDAC11-214ENST00000446613 RIMS2Q9UQ26 1411 aa20.09■□□□□ 0.81
HDAC11-214ENST00000446613 CDC42BPGQ6DT37 1551 aa20.09■□□□□ 0.81
HDAC11-214ENST00000446613 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
HDAC11-214ENST00000446613 JARID2Q92833 1246 aaPredicted RBP20.09■□□□□ 0.81
HDAC11-214ENST00000446613 MIS18AQ9NYP9 233 aa20.09■□□□□ 0.81
HDAC11-214ENST00000446613 DLG5Q8TDM6 1919 aa20.08■□□□□ 0.81
HDAC11-214ENST00000446613 LRSAM1Q6UWE0 723 aa20.08■□□□□ 0.81
HDAC11-214ENST00000446613 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.81
HDAC11-214ENST00000446613 ZKSCAN5Q9Y2L8 839 aa20.08■□□□□ 0.81
HDAC11-214ENST00000446613 ZNF500O60304 480 aaPredicted RBP20.08■□□□□ 0.8
HDAC11-214ENST00000446613 TMX3Q96JJ7 454 aa20.08■□□□□ 0.8
HDAC11-214ENST00000446613 ARHGEF40Q8TER5 1519 aa20.07■□□□□ 0.8
HDAC11-214ENST00000446613 PALD1Q9ULE6 856 aa20.07■□□□□ 0.8
HDAC11-214ENST00000446613 RGS12O14924 1447 aa20.07■□□□□ 0.8
HDAC11-214ENST00000446613 RTL1A6NKG5 1358 aa20.06■□□□□ 0.8
HDAC11-214ENST00000446613 F6X3S4 739 aa20.06■□□□□ 0.8
HDAC11-214ENST00000446613 CASC1Q6TDU7 716 aa20.06■□□□□ 0.8
HDAC11-214ENST00000446613 SLC4A10Q6U841 1118 aa20.06■□□□□ 0.8
HDAC11-214ENST00000446613 ERC2O15083 957 aa20.05■□□□□ 0.8
HDAC11-214ENST00000446613 EXOC6BQ9Y2D4 811 aa20.05■□□□□ 0.8
HDAC11-214ENST00000446613 MLH3Q9UHC1 1453 aa20.05■□□□□ 0.8
HDAC11-214ENST00000446613 REC8O95072 547 aa20.04■□□□□ 0.8
HDAC11-214ENST00000446613 HS1BP3Q53T59 392 aa20.04■□□□□ 0.8
HDAC11-214ENST00000446613 RPAP2Q8IXW5 612 aaPredicted RBP20.04■□□□□ 0.8
HDAC11-214ENST00000446613 DTNBO60941 627 aa20.03■□□□□ 0.8
HDAC11-214ENST00000446613 GADD45BO75293 160 aaPredicted RBP20.03■□□□□ 0.8
HDAC11-214ENST00000446613 ZNF830Q96NB3 372 aaPredicted RBP20.03■□□□□ 0.8
HDAC11-214ENST00000446613 UPF3BQ9BZI7 483 aaKnown RBP20.03■□□□□ 0.8
HDAC11-214ENST00000446613 G2E3Q7L622 706 aa20.02■□□□□ 0.8
HDAC11-214ENST00000446613 SLC52A1Q9NWF4 448 aa20.02■□□□□ 0.8
HDAC11-214ENST00000446613 YEATS2Q9ULM3 1422 aa20.02■□□□□ 0.8
HDAC11-214ENST00000446613 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
HDAC11-214ENST00000446613 PDE1AP54750 535 aa20.02■□□□□ 0.8
HDAC11-214ENST00000446613 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
HDAC11-214ENST00000446613 TSC1Q92574 1164 aa20.02■□□□□ 0.8
HDAC11-214ENST00000446613 REREQ9P2R6 1566 aa20.02■□□□□ 0.8
HDAC11-214ENST00000446613 CLTCQ00610 1675 aaKnown RBP20.01■□□□□ 0.79
HDAC11-214ENST00000446613 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
HDAC11-214ENST00000446613 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDAC11-214ENST00000446613 LMOD3Q0VAK6 560 aa20■□□□□ 0.79
HDAC11-214ENST00000446613 SOX12O15370 315 aa20■□□□□ 0.79
HDAC11-214ENST00000446613 PTMAP06454 111 aaKnown RBP20■□□□□ 0.79
HDAC11-214ENST00000446613 C17orf53Q8N3J3 647 aaPredicted RBP19.99■□□□□ 0.79
HDAC11-214ENST00000446613 BRD1O95696 1058 aa19.98■□□□□ 0.79
HDAC11-214ENST00000446613 RILPL2Q969X0 211 aa19.98■□□□□ 0.79
HDAC11-214ENST00000446613 ANO2Q9NQ90 1003 aa19.98■□□□□ 0.79
HDAC11-214ENST00000446613 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
HDAC11-214ENST00000446613 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.98■□□□□ 0.79
HDAC11-214ENST00000446613 NPM1P06748 294 aaKnown RBP eCLIP19.97■□□□□ 0.79
HDAC11-214ENST00000446613 TERF1P54274 439 aa19.97■□□□□ 0.79
HDAC11-214ENST00000446613 COG3Q96JB2 828 aa19.97■□□□□ 0.79
HDAC11-214ENST00000446613 LARP6Q9BRS8 491 aaKnown RBP19.97■□□□□ 0.79
HDAC11-214ENST00000446613 IL25Q9H293 177 aa19.97■□□□□ 0.79
HDAC11-214ENST00000446613 CCDC39Q9UFE4 941 aa19.97■□□□□ 0.79
HDAC11-214ENST00000446613 TMEM131LA2VDJ0 1609 aa19.97■□□□□ 0.79
HDAC11-214ENST00000446613 UNC5CLQ8IV45 518 aa19.97■□□□□ 0.79
HDAC11-214ENST00000446613 TRIM6-TRIM34B2RNG4 842 aa19.96■□□□□ 0.79
HDAC11-214ENST00000446613 KIF24Q5T7B8 1368 aa19.96■□□□□ 0.79
HDAC11-214ENST00000446613 FAM177BA6PVY3 158 aa19.96■□□□□ 0.79
HDAC11-214ENST00000446613 CHL1O00533 1208 aa19.96■□□□□ 0.79
HDAC11-214ENST00000446613 FOXO3O43524 673 aa19.96■□□□□ 0.79
HDAC11-214ENST00000446613 ESYT1Q9BSJ8 1104 aa19.96■□□□□ 0.79
HDAC11-214ENST00000446613 TSPY26PQ9H489 355 aa19.96■□□□□ 0.79
HDAC11-214ENST00000446613 PRDM10Q9NQV6 1147 aa19.96■□□□□ 0.79
HDAC11-214ENST00000446613 CPS1P31327 1500 aa19.95■□□□□ 0.78
HDAC11-214ENST00000446613 EIF4A2Q14240 407 aaKnown RBP19.95■□□□□ 0.78
HDAC11-214ENST00000446613 NECTIN2Q92692 538 aa19.95■□□□□ 0.78
HDAC11-214ENST00000446613 CDK12Q9NYV4 1490 aaPredicted RBP19.95■□□□□ 0.78
HDAC11-214ENST00000446613 MBD3O95983 291 aa19.94■□□□□ 0.78
HDAC11-214ENST00000446613 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
HDAC11-214ENST00000446613 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
HDAC11-214ENST00000446613 USP48Q86UV5 1035 aa19.93■□□□□ 0.78
HDAC11-214ENST00000446613 USP25Q9UHP3 1055 aa19.93■□□□□ 0.78
HDAC11-214ENST00000446613 PNMA6EA0A0J9YXQ4 647 aa19.93■□□□□ 0.78
HDAC11-214ENST00000446613 DNTTIP2Q5QJE6 756 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms