RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 NPHP4O75161 1426 aaPredicted RBP11.72□□□□□ -0.53
LINC00578-204ENST00000446548 POLR3AO14802 1390 aaPredicted RBP11.72□□□□□ -0.53
LINC00578-204ENST00000446548 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
LINC00578-204ENST00000446548 MORC1Q86VD1 984 aa11.72□□□□□ -0.53
LINC00578-204ENST00000446548 NUDT16Q96DE0 195 aaKnown RBP11.72□□□□□ -0.53
LINC00578-204ENST00000446548 EDC4Q6P2E9 1401 aaKnown RBP11.71□□□□□ -0.53
LINC00578-204ENST00000446548 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
LINC00578-204ENST00000446548 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.53
LINC00578-204ENST00000446548 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
LINC00578-204ENST00000446548 MAP2P11137 1827 aaKnown RBP11.7□□□□□ -0.54
LINC00578-204ENST00000446548 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
LINC00578-204ENST00000446548 FYB1O15117 783 aa11.69□□□□□ -0.54
LINC00578-204ENST00000446548 KCNA6P17658 529 aa11.69□□□□□ -0.54
LINC00578-204ENST00000446548 ADAMTS8Q9UP79 889 aa11.69□□□□□ -0.54
LINC00578-204ENST00000446548 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
LINC00578-204ENST00000446548 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
LINC00578-204ENST00000446548 GGNBP2Q9H3C7 697 aa11.68□□□□□ -0.54
LINC00578-204ENST00000446548 STRCP1A6NGW2 1772 aa11.68□□□□□ -0.54
LINC00578-204ENST00000446548 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
LINC00578-204ENST00000446548 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
LINC00578-204ENST00000446548 ANKARQ7Z5J8 1434 aa11.67□□□□□ -0.54
LINC00578-204ENST00000446548 MARF1Q9Y4F3 1742 aaKnown RBP11.66□□□□□ -0.54
LINC00578-204ENST00000446548 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
LINC00578-204ENST00000446548 TNNT2P45379 298 aaPredicted RBP11.66□□□□□ -0.54
LINC00578-204ENST00000446548 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00578-204ENST00000446548 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
LINC00578-204ENST00000446548 PLEKHG3A1L390 1219 aa11.65□□□□□ -0.54
LINC00578-204ENST00000446548 PBX2P40425 430 aa11.65□□□□□ -0.54
LINC00578-204ENST00000446548 PDIA6Q15084 440 aa11.65□□□□□ -0.54
LINC00578-204ENST00000446548 ARHGEF1Q92888 912 aaKnown RBP11.65□□□□□ -0.54
LINC00578-204ENST00000446548 USP6P35125 1406 aa11.65□□□□□ -0.54
LINC00578-204ENST00000446548 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
LINC00578-204ENST00000446548 IQSEC2Q5JU85 1478 aa11.64□□□□□ -0.55
LINC00578-204ENST00000446548 ADGRL3Q9HAR2 1447 aa11.64□□□□□ -0.55
LINC00578-204ENST00000446548 MTHFSP49914 203 aa11.64□□□□□ -0.55
LINC00578-204ENST00000446548 FOSBP53539 338 aa11.64□□□□□ -0.55
LINC00578-204ENST00000446548 PIK3C2AO00443 1686 aa11.64□□□□□ -0.55
LINC00578-204ENST00000446548 STRCQ7RTU9 1775 aa11.64□□□□□ -0.55
LINC00578-204ENST00000446548 ACEP12821 1306 aa11.63□□□□□ -0.55
LINC00578-204ENST00000446548 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
LINC00578-204ENST00000446548 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
LINC00578-204ENST00000446548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00578-204ENST00000446548 KCNV2Q8TDN2 545 aa11.63□□□□□ -0.55
LINC00578-204ENST00000446548 NUDCQ9Y266 331 aa11.63□□□□□ -0.55
LINC00578-204ENST00000446548 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
LINC00578-204ENST00000446548 NME9Q86XW9 330 aa11.62□□□□□ -0.55
LINC00578-204ENST00000446548 SUPT16HQ9Y5B9 1047 aaKnown RBP11.62□□□□□ -0.55
LINC00578-204ENST00000446548 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
LINC00578-204ENST00000446548 LMTK3Q96Q04 1460 aa11.62□□□□□ -0.55
LINC00578-204ENST00000446548 PEAK1Q9H792 1746 aa11.61□□□□□ -0.55
LINC00578-204ENST00000446548 PHF14O94880 888 aa11.61□□□□□ -0.55
LINC00578-204ENST00000446548 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
LINC00578-204ENST00000446548 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
LINC00578-204ENST00000446548 CDK12Q9NYV4 1490 aaPredicted RBP11.61□□□□□ -0.55
LINC00578-204ENST00000446548 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
LINC00578-204ENST00000446548 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
LINC00578-204ENST00000446548 XIRP1Q702N8 1843 aaKnown RBP11.6□□□□□ -0.55
LINC00578-204ENST00000446548 AATKQ6ZMQ8 1374 aa11.6□□□□□ -0.55
LINC00578-204ENST00000446548 CCDC146Q8IYE0 955 aa11.6□□□□□ -0.55
LINC00578-204ENST00000446548 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
LINC00578-204ENST00000446548 CFAP53Q96M91 514 aa11.6□□□□□ -0.55
LINC00578-204ENST00000446548 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
LINC00578-204ENST00000446548 ARHGAP33O14559 1287 aa11.59□□□□□ -0.55
LINC00578-204ENST00000446548 PTGER2P43116 358 aa11.59□□□□□ -0.55
LINC00578-204ENST00000446548 PDE3BQ13370 1112 aa11.59□□□□□ -0.55
LINC00578-204ENST00000446548 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
LINC00578-204ENST00000446548 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
LINC00578-204ENST00000446548 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
LINC00578-204ENST00000446548 EPAS1Q99814 870 aa11.58□□□□□ -0.56
LINC00578-204ENST00000446548 POLKQ9UBT6 870 aa11.58□□□□□ -0.56
LINC00578-204ENST00000446548 USP31Q70CQ4 1352 aa11.57□□□□□ -0.56
LINC00578-204ENST00000446548 PMFBP1Q8TBY8 1022 aa11.57□□□□□ -0.56
LINC00578-204ENST00000446548 DDX12PQ92771 950 aa11.57□□□□□ -0.56
LINC00578-204ENST00000446548 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
LINC00578-204ENST00000446548 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
LINC00578-204ENST00000446548 BCL2L12Q9HB09 334 aa11.57□□□□□ -0.56
LINC00578-204ENST00000446548 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
LINC00578-204ENST00000446548 RGPD1P0DJD0 1748 aa11.57□□□□□ -0.56
LINC00578-204ENST00000446548 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
LINC00578-204ENST00000446548 KIF1AQ12756 1690 aa11.56□□□□□ -0.56
LINC00578-204ENST00000446548 APAF1O14727 1248 aa11.56□□□□□ -0.56
LINC00578-204ENST00000446548 FBLN1P23142 703 aa11.56□□□□□ -0.56
LINC00578-204ENST00000446548 PTPREP23469 700 aa11.56□□□□□ -0.56
LINC00578-204ENST00000446548 COG3Q96JB2 828 aa11.56□□□□□ -0.56
LINC00578-204ENST00000446548 TRPM3Q9HCF6 1732 aaPredicted RBP11.56□□□□□ -0.56
LINC00578-204ENST00000446548 AXIN2Q9Y2T1 843 aa11.56□□□□□ -0.56
LINC00578-204ENST00000446548 TTC21AQ8NDW8 1320 aa11.56□□□□□ -0.56
LINC00578-204ENST00000446548 NEFLP07196 543 aa11.55□□□□□ -0.56
LINC00578-204ENST00000446548 HSPA2P54652 639 aa11.55□□□□□ -0.56
LINC00578-204ENST00000446548 KCNK17Q96T54 332 aa11.55□□□□□ -0.56
LINC00578-204ENST00000446548 EMILIN1Q9Y6C2 1016 aa11.55□□□□□ -0.56
LINC00578-204ENST00000446548 LSM11P83369 360 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00578-204ENST00000446548 ANKRD13DQ6ZTN6 518 aa11.54□□□□□ -0.56
LINC00578-204ENST00000446548 RUNDC1Q96C34 613 aa11.54□□□□□ -0.56
LINC00578-204ENST00000446548 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
LINC00578-204ENST00000446548 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
LINC00578-204ENST00000446548 NBR1Q14596 966 aa11.53□□□□□ -0.56
LINC00578-204ENST00000446548 POTEEQ6S8J3 1075 aa11.53□□□□□ -0.56
LINC00578-204ENST00000446548 NGEFQ8N5V2 710 aa11.53□□□□□ -0.56
LINC00578-204ENST00000446548 NGDNQ8NEJ9 315 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms