RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
ERCC3-203ENST00000445889 ARHGEF40Q8TER5 1519 aa17.49■□□□□ 0.39
ERCC3-203ENST00000445889 CCDC173Q0VFZ6 552 aa17.49■□□□□ 0.39
ERCC3-203ENST00000445889 KIAA1211Q6ZU35 1233 aa17.49■□□□□ 0.39
ERCC3-203ENST00000445889 MPNDQ8N594 471 aa17.49■□□□□ 0.39
ERCC3-203ENST00000445889 RNF214Q8ND24 703 aa17.49■□□□□ 0.39
ERCC3-203ENST00000445889 DTNBO60941 627 aa17.49■□□□□ 0.39
ERCC3-203ENST00000445889 GPT2Q8TD30 523 aa17.49■□□□□ 0.39
ERCC3-203ENST00000445889 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
ERCC3-203ENST00000445889 PTMSP20962 102 aa17.48■□□□□ 0.39
ERCC3-203ENST00000445889 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
ERCC3-203ENST00000445889 MSH6P52701 1360 aa17.48■□□□□ 0.39
ERCC3-203ENST00000445889 RRP9O43818 475 aaKnown RBP17.48■□□□□ 0.39
ERCC3-203ENST00000445889 ZFYVE9O95405 1425 aa17.48■□□□□ 0.39
ERCC3-203ENST00000445889 RIMS2Q9UQ26 1411 aa17.48■□□□□ 0.39
ERCC3-203ENST00000445889 NEK4P51957 841 aa17.48■□□□□ 0.39
ERCC3-203ENST00000445889 MSNP26038 577 aaKnown RBP17.47■□□□□ 0.39
ERCC3-203ENST00000445889 RBM10P98175 930 aaKnown RBP17.47■□□□□ 0.39
ERCC3-203ENST00000445889 EIF4A2Q14240 407 aaKnown RBP17.47■□□□□ 0.39
ERCC3-203ENST00000445889 SYCE3A1L190 88 aa17.46■□□□□ 0.39
ERCC3-203ENST00000445889 NUCB2P80303 420 aa17.46■□□□□ 0.39
ERCC3-203ENST00000445889 LMOD3Q0VAK6 560 aa17.46■□□□□ 0.39
ERCC3-203ENST00000445889 ZSCAN30Q86W11 494 aa17.46■□□□□ 0.39
ERCC3-203ENST00000445889 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.46■□□□□ 0.39
ERCC3-203ENST00000445889 ARID3AQ99856 593 aa17.46■□□□□ 0.39
ERCC3-203ENST00000445889 MYO5BQ9ULV0 1848 aa17.45■□□□□ 0.38
ERCC3-203ENST00000445889 ST18O60284 1047 aa17.45■□□□□ 0.38
ERCC3-203ENST00000445889 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
ERCC3-203ENST00000445889 PPP1R9BQ96SB3 815 aa17.45■□□□□ 0.38
ERCC3-203ENST00000445889 GDPD2Q9HCC8 539 aa17.45■□□□□ 0.38
ERCC3-203ENST00000445889 TMEM63CQ9P1W3 806 aa17.44■□□□□ 0.38
ERCC3-203ENST00000445889 CASC1Q6TDU7 716 aa17.44■□□□□ 0.38
ERCC3-203ENST00000445889 RILPL2Q969X0 211 aa17.44■□□□□ 0.38
ERCC3-203ENST00000445889 CYP2E1P05181 493 aaPredicted RBP17.44■□□□□ 0.38
ERCC3-203ENST00000445889 RPAP2Q8IXW5 612 aaPredicted RBP17.44■□□□□ 0.38
ERCC3-203ENST00000445889 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
ERCC3-203ENST00000445889 PALD1Q9ULE6 856 aa17.43■□□□□ 0.38
ERCC3-203ENST00000445889 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
ERCC3-203ENST00000445889 LARP6Q9BRS8 491 aaKnown RBP17.43■□□□□ 0.38
ERCC3-203ENST00000445889 UPF3BQ9BZI7 483 aaKnown RBP17.43■□□□□ 0.38
ERCC3-203ENST00000445889 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
ERCC3-203ENST00000445889 R3HCC1Q9Y3T6 440 aaKnown RBP17.43■□□□□ 0.38
ERCC3-203ENST00000445889 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
ERCC3-203ENST00000445889 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
ERCC3-203ENST00000445889 TRIM6-TRIM34B2RNG4 842 aa17.42■□□□□ 0.38
ERCC3-203ENST00000445889 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
ERCC3-203ENST00000445889 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
ERCC3-203ENST00000445889 CHL1O00533 1208 aa17.42■□□□□ 0.38
ERCC3-203ENST00000445889 CLEC17AQ6ZS10 378 aa17.42■□□□□ 0.38
ERCC3-203ENST00000445889 METP08581 1390 aa17.42■□□□□ 0.38
ERCC3-203ENST00000445889 ERC2O15083 957 aa17.41■□□□□ 0.38
ERCC3-203ENST00000445889 PDE1AP54750 535 aa17.41■□□□□ 0.38
ERCC3-203ENST00000445889 TMX3Q96JJ7 454 aa17.41■□□□□ 0.38
ERCC3-203ENST00000445889 KNDC1Q76NI1 1749 aa17.41■□□□□ 0.38
ERCC3-203ENST00000445889 MAP4K4O95819 1239 aaPredicted RBP17.41■□□□□ 0.38
ERCC3-203ENST00000445889 REC8O95072 547 aa17.4■□□□□ 0.38
ERCC3-203ENST00000445889 ZNF445P59923 1031 aa17.4■□□□□ 0.38
ERCC3-203ENST00000445889 ANO2Q9NQ90 1003 aa17.4■□□□□ 0.38
ERCC3-203ENST00000445889 CPS1P31327 1500 aa17.39■□□□□ 0.38
ERCC3-203ENST00000445889 PRR36Q9H6K5 1346 aa17.39■□□□□ 0.38
ERCC3-203ENST00000445889 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
ERCC3-203ENST00000445889 RGS12O14924 1447 aa17.39■□□□□ 0.37
ERCC3-203ENST00000445889 PNMA6EA0A0J9YXQ4 647 aa17.39■□□□□ 0.37
ERCC3-203ENST00000445889 UNC5CLQ8IV45 518 aa17.39■□□□□ 0.37
ERCC3-203ENST00000445889 ARHGAP31Q2M1Z3 1444 aa17.39■□□□□ 0.37
ERCC3-203ENST00000445889 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
ERCC3-203ENST00000445889 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
ERCC3-203ENST00000445889 DIP2CQ9Y2E4 1556 aa17.38■□□□□ 0.37
ERCC3-203ENST00000445889 TPM2P07951 284 aa17.37■□□□□ 0.37
ERCC3-203ENST00000445889 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.37■□□□□ 0.37
ERCC3-203ENST00000445889 TMEM131LA2VDJ0 1609 aa17.37■□□□□ 0.37
ERCC3-203ENST00000445889 IL25Q9H293 177 aa17.37■□□□□ 0.37
ERCC3-203ENST00000445889 ANKRD26Q9UPS8 1709 aa17.37■□□□□ 0.37
ERCC3-203ENST00000445889 OFD1O75665 1012 aa17.37■□□□□ 0.37
ERCC3-203ENST00000445889 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
ERCC3-203ENST00000445889 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
ERCC3-203ENST00000445889 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
ERCC3-203ENST00000445889 FAM13BQ9NYF5 915 aa17.37■□□□□ 0.37
ERCC3-203ENST00000445889 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
ERCC3-203ENST00000445889 CYB5RLQ6IPT4 315 aa17.36■□□□□ 0.37
ERCC3-203ENST00000445889 IBTKQ9P2D0 1353 aaPredicted RBP17.36■□□□□ 0.37
ERCC3-203ENST00000445889 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
ERCC3-203ENST00000445889 FKBP5Q13451 457 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-203ENST00000445889 GADD45BO75293 160 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-203ENST00000445889 NUTM2GQ5VZR2 741 aa17.34■□□□□ 0.37
ERCC3-203ENST00000445889 HMMRO75330 724 aa17.34■□□□□ 0.37
ERCC3-203ENST00000445889 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
ERCC3-203ENST00000445889 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
ERCC3-203ENST00000445889 ACEP12821 1306 aa17.33■□□□□ 0.37
ERCC3-203ENST00000445889 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.37
ERCC3-203ENST00000445889 KIF20BQ96Q89 1820 aa17.33■□□□□ 0.36
ERCC3-203ENST00000445889 MAP3K19Q56UN5 1328 aa17.33■□□□□ 0.36
ERCC3-203ENST00000445889 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.33■□□□□ 0.36
ERCC3-203ENST00000445889 CDC42BPGQ6DT37 1551 aa17.33■□□□□ 0.36
ERCC3-203ENST00000445889 ATP7BP35670 1465 aa17.32■□□□□ 0.36
ERCC3-203ENST00000445889 GNAI2P04899 355 aa17.32■□□□□ 0.36
ERCC3-203ENST00000445889 LRSAM1Q6UWE0 723 aa17.32■□□□□ 0.36
ERCC3-203ENST00000445889 ZNF830Q96NB3 372 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-203ENST00000445889 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
ERCC3-203ENST00000445889 MX1P20591 662 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms