RNA–Protein interactions for RNA: ENST00000445776.1

PSMD4-205, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 703 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-205ENST00000445776 DOT1LQ8TEK3 1739 aa24.13■■□□□ 1.45
PSMD4-205ENST00000445776 TMF1P82094 1093 aa24.12■■□□□ 1.45
PSMD4-205ENST00000445776 RRS1Q15050 365 aaKnown RBP24.12■■□□□ 1.45
PSMD4-205ENST00000445776 MAP3K5Q99683 1374 aa24.12■■□□□ 1.45
PSMD4-205ENST00000445776 PRIM1P49642 420 aaKnown RBP24.11■■□□□ 1.45
PSMD4-205ENST00000445776 ZCRB1Q8TBF4 217 aaKnown RBP24.11■■□□□ 1.45
PSMD4-205ENST00000445776 GGNBP2Q9H3C7 697 aa24.11■■□□□ 1.45
PSMD4-205ENST00000445776 DCAF8L1A6NGE4 600 aa24.1■■□□□ 1.45
PSMD4-205ENST00000445776 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
PSMD4-205ENST00000445776 ARXQ96QS3 562 aa24.08■■□□□ 1.45
PSMD4-205ENST00000445776 PNPLA7Q6ZV29 1317 aa24.08■■□□□ 1.44
PSMD4-205ENST00000445776 TUBGCP6Q96RT7 1819 aa24.07■■□□□ 1.44
PSMD4-205ENST00000445776 INSRP06213 1382 aa24.07■■□□□ 1.44
PSMD4-205ENST00000445776 CARD14Q9BXL6 1004 aa24.07■■□□□ 1.44
PSMD4-205ENST00000445776 CGNL1Q0VF96 1302 aa24.07■■□□□ 1.44
PSMD4-205ENST00000445776 KIF24Q5T7B8 1368 aa24.06■■□□□ 1.44
PSMD4-205ENST00000445776 KAT6BQ8WYB5 2073 aa24.06■■□□□ 1.44
PSMD4-205ENST00000445776 KIF20BQ96Q89 1820 aa24.06■■□□□ 1.44
PSMD4-205ENST00000445776 SLC16A10Q8TF71 515 aa24.06■■□□□ 1.44
PSMD4-205ENST00000445776 KCNQ4P56696 695 aa24.05■■□□□ 1.44
PSMD4-205ENST00000445776 HSP90AB2PQ58FF8 381 aa24.05■■□□□ 1.44
PSMD4-205ENST00000445776 USHBP1Q8N6Y0 703 aa24.04■■□□□ 1.44
PSMD4-205ENST00000445776 SYTL4Q96C24 671 aaPredicted RBP24.03■■□□□ 1.44
PSMD4-205ENST00000445776 NCAPD2Q15021 1401 aa24.02■■□□□ 1.44
PSMD4-205ENST00000445776 CDCA8Q53HL2 280 aa24.02■■□□□ 1.44
PSMD4-205ENST00000445776 FLT4P35916 1363 aa24.02■■□□□ 1.44
PSMD4-205ENST00000445776 SMG6Q86US8 1419 aaKnown RBP24■■□□□ 1.43
PSMD4-205ENST00000445776 ANKRD26Q9UPS8 1709 aa23.98■■□□□ 1.43
PSMD4-205ENST00000445776 RAPGEF4Q8WZA2 1011 aa23.98■■□□□ 1.43
PSMD4-205ENST00000445776 TFCP2L1Q9NZI6 479 aa23.98■■□□□ 1.43
PSMD4-205ENST00000445776 TIMELESSQ9UNS1 1208 aa23.98■■□□□ 1.43
PSMD4-205ENST00000445776 TATP17735 454 aaPredicted RBP23.97■■□□□ 1.43
PSMD4-205ENST00000445776 NSD3Q9BZ95 1437 aa23.97■■□□□ 1.43
PSMD4-205ENST00000445776 CCNL1Q9UK58 526 aaPredicted RBP23.97■■□□□ 1.43
PSMD4-205ENST00000445776 CYP27B1O15528 508 aa23.96■■□□□ 1.43
PSMD4-205ENST00000445776 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
PSMD4-205ENST00000445776 EMILIN1Q9Y6C2 1016 aa23.96■■□□□ 1.43
PSMD4-205ENST00000445776 PKD1L3Q7Z443 1732 aa23.96■■□□□ 1.43
PSMD4-205ENST00000445776 TOGARAM1Q9Y4F4 1720 aa23.96■■□□□ 1.43
PSMD4-205ENST00000445776 GOLGB1Q14789 3259 aaKnown RBP23.95■■□□□ 1.43
PSMD4-205ENST00000445776 PCDH11XQ9BZA7 1347 aa23.95■■□□□ 1.42
PSMD4-205ENST00000445776 PCDH11YQ9BZA8 1340 aa23.95■■□□□ 1.42
PSMD4-205ENST00000445776 CHD4Q14839 1912 aa23.94■■□□□ 1.42
PSMD4-205ENST00000445776 COL23A1Q86Y22 540 aaPredicted RBP23.93■■□□□ 1.42
PSMD4-205ENST00000445776 C5P01031 1676 aa23.92■■□□□ 1.42
PSMD4-205ENST00000445776 POLD1P28340 1107 aa23.92■■□□□ 1.42
PSMD4-205ENST00000445776 WASHC2AQ641Q2 1341 aa23.91■■□□□ 1.42
PSMD4-205ENST00000445776 NKX1-1Q15270 411 aaPredicted RBP23.91■■□□□ 1.42
PSMD4-205ENST00000445776 TAF1LQ8IZX4 1826 aa23.91■■□□□ 1.42
PSMD4-205ENST00000445776 ITGB4P16144 1822 aa23.89■■□□□ 1.42
PSMD4-205ENST00000445776 PALLDQ8WX93 1383 aa23.89■■□□□ 1.41
PSMD4-205ENST00000445776 CLSPNQ9HAW4 1339 aa23.88■■□□□ 1.41
PSMD4-205ENST00000445776 NLGN2Q8NFZ4 835 aa23.88■■□□□ 1.41
PSMD4-205ENST00000445776 MPRIPQ6WCQ1 1025 aa23.86■■□□□ 1.41
PSMD4-205ENST00000445776 EYA1Q99502 592 aa23.86■■□□□ 1.41
PSMD4-205ENST00000445776 POLKQ9UBT6 870 aa23.86■■□□□ 1.41
PSMD4-205ENST00000445776 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
PSMD4-205ENST00000445776 C4BP0C0L5 1744 aa23.84■■□□□ 1.41
PSMD4-205ENST00000445776 GPR162Q16538 588 aa23.84■■□□□ 1.41
PSMD4-205ENST00000445776 AMIGO3Q86WK7 504 aa23.84■■□□□ 1.41
PSMD4-205ENST00000445776 PIGBQ92521 554 aa23.84■■□□□ 1.41
PSMD4-205ENST00000445776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.84■■□□□ 1.41
PSMD4-205ENST00000445776 HMGB2P26583 209 aaKnown RBP23.81■■□□□ 1.4
PSMD4-205ENST00000445776 SMARCC1Q92922 1105 aaPredicted RBP23.81■■□□□ 1.4
PSMD4-205ENST00000445776 PPM1GO15355 546 aaPredicted RBP23.8■■□□□ 1.4
PSMD4-205ENST00000445776 KLHL34Q8N239 644 aa23.8■■□□□ 1.4
PSMD4-205ENST00000445776 FLAD1Q8NFF5 587 aa23.8■■□□□ 1.4
PSMD4-205ENST00000445776 SPG7Q9UQ90 795 aa23.8■■□□□ 1.4
PSMD4-205ENST00000445776 PLEKHG2Q9H7P9 1386 aa23.79■■□□□ 1.4
PSMD4-205ENST00000445776 UBR3Q6ZT12 1888 aa23.79■■□□□ 1.4
PSMD4-205ENST00000445776 YBX3P16989 372 aaKnown RBP eCLIP23.79■■□□□ 1.42e-10■□□□□ 10.6
PSMD4-205ENST00000445776 MSL1Q68DK7 614 aa23.79■■□□□ 1.4
PSMD4-205ENST00000445776 MSH5O43196 834 aa23.78■■□□□ 1.4
PSMD4-205ENST00000445776 PHKG2P15735 406 aa23.77■■□□□ 1.4
PSMD4-205ENST00000445776 EIF4A2Q14240 407 aaKnown RBP23.77■■□□□ 1.4
PSMD4-205ENST00000445776 CD2APQ9Y5K6 639 aa23.76■■□□□ 1.39
PSMD4-205ENST00000445776 LOC102724428A0A0B4J2F2 783 aa23.75■■□□□ 1.39
PSMD4-205ENST00000445776 SIK1P57059 783 aa23.75■■□□□ 1.39
PSMD4-205ENST00000445776 LINC00116Q8NCU8 138 aa23.75■■□□□ 1.39
PSMD4-205ENST00000445776 SMIM5Q71RC9 77 aa23.74■■□□□ 1.39
PSMD4-205ENST00000445776 IFNL2Q8IZJ0 200 aa23.74■■□□□ 1.39
PSMD4-205ENST00000445776 ASAP1Q9ULH1 1129 aa23.74■■□□□ 1.39
PSMD4-205ENST00000445776 IGSF1Q8N6C5 1336 aa23.74■■□□□ 1.39
PSMD4-205ENST00000445776 ITPK1Q13572 414 aa23.73■■□□□ 1.39
PSMD4-205ENST00000445776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.72■■□□□ 1.39
PSMD4-205ENST00000445776 C1QTNF8P60827 252 aa23.72■■□□□ 1.39
PSMD4-205ENST00000445776 AK7Q96M32 723 aa23.72■■□□□ 1.39
PSMD4-205ENST00000445776 GRIN3BO60391 1043 aa23.71■■□□□ 1.39
PSMD4-205ENST00000445776 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
PSMD4-205ENST00000445776 ATG3Q9NT62 314 aa23.71■■□□□ 1.39
PSMD4-205ENST00000445776 TMOD3Q9NYL9 352 aa23.71■■□□□ 1.39
PSMD4-205ENST00000445776 KDRP35968 1356 aa23.7■■□□□ 1.38
PSMD4-205ENST00000445776 HSPA5P11021 654 aaKnown RBP23.7■■□□□ 1.38
PSMD4-205ENST00000445776 SSFA2P28290 1259 aa23.7■■□□□ 1.38
PSMD4-205ENST00000445776 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
PSMD4-205ENST00000445776 PANK3Q9H999 370 aa23.7■■□□□ 1.38
PSMD4-205ENST00000445776 TNNT2P45379 298 aaPredicted RBP23.69■■□□□ 1.38
PSMD4-205ENST00000445776 EIF4G2P78344 907 aaKnown RBP eCLIP23.69■■□□□ 1.38
PSMD4-205ENST00000445776 ZNF831Q5JPB2 1677 aa23.69■■□□□ 1.38
PSMD4-205ENST00000445776 SLC4A9Q96Q91 983 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms