RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
USE1-202ENST00000445667 PROM2Q8N271 834 aa20.18■□□□□ 0.82
USE1-202ENST00000445667 EYA1Q99502 592 aa20.18■□□□□ 0.82
USE1-202ENST00000445667 RREB1Q92766 1687 aa20.17■□□□□ 0.82
USE1-202ENST00000445667 PER1O15534 1290 aaPredicted RBP20.17■□□□□ 0.82
USE1-202ENST00000445667 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
USE1-202ENST00000445667 NBPF14Q5TI25 921 aa20.16■□□□□ 0.82
USE1-202ENST00000445667 TXNRD1Q16881 649 aa20.15■□□□□ 0.82
USE1-202ENST00000445667 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
USE1-202ENST00000445667 NHSQ6T4R5 1651 aa20.14■□□□□ 0.81
USE1-202ENST00000445667 CC2D1BQ5T0F9 858 aaKnown RBP20.14■□□□□ 0.81
USE1-202ENST00000445667 SYTL4Q96C24 671 aaPredicted RBP20.14■□□□□ 0.81
USE1-202ENST00000445667 PRIM1P49642 420 aaKnown RBP20.13■□□□□ 0.81
USE1-202ENST00000445667 CNGB1Q14028 1251 aaPredicted RBP20.13■□□□□ 0.81
USE1-202ENST00000445667 SRCAPQ6ZRS2 3230 aa20.13■□□□□ 0.81
USE1-202ENST00000445667 SHANK3Q9BYB0 1731 aa20.13■□□□□ 0.81
USE1-202ENST00000445667 NCAPD2Q15021 1401 aa20.11■□□□□ 0.81
USE1-202ENST00000445667 KAT6BQ8WYB5 2073 aa20.11■□□□□ 0.81
USE1-202ENST00000445667 ANO8Q9HCE9 1232 aaPredicted RBP20.11■□□□□ 0.81
USE1-202ENST00000445667 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
USE1-202ENST00000445667 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
USE1-202ENST00000445667 CYP27B1O15528 508 aa20.1■□□□□ 0.81
USE1-202ENST00000445667 PCDH11XQ9BZA7 1347 aa20.09■□□□□ 0.81
USE1-202ENST00000445667 PCDH11YQ9BZA8 1340 aa20.09■□□□□ 0.81
USE1-202ENST00000445667 BTAF1O14981 1849 aa20.08■□□□□ 0.8
USE1-202ENST00000445667 MTHFSP49914 203 aa20.07■□□□□ 0.8
USE1-202ENST00000445667 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
USE1-202ENST00000445667 IGSF1Q8N6C5 1336 aa20.06■□□□□ 0.8
USE1-202ENST00000445667 DOT1LQ8TEK3 1739 aa20.06■□□□□ 0.8
USE1-202ENST00000445667 LRRC4BQ9NT99 713 aa20.05■□□□□ 0.8
USE1-202ENST00000445667 STK32BQ9NY57 414 aa20.04■□□□□ 0.8
USE1-202ENST00000445667 IL13P35225 146 aa20.03■□□□□ 0.8
USE1-202ENST00000445667 KCNQ4P56696 695 aa20.03■□□□□ 0.8
USE1-202ENST00000445667 AEBP1Q8IUX7 1158 aa20.03■□□□□ 0.8
USE1-202ENST00000445667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.03■□□□□ 0.8
USE1-202ENST00000445667 PKD1L3Q7Z443 1732 aa20.02■□□□□ 0.8
USE1-202ENST00000445667 NKX1-1Q15270 411 aaPredicted RBP20.02■□□□□ 0.8
USE1-202ENST00000445667 SLC15A2Q16348 729 aa20.02■□□□□ 0.8
USE1-202ENST00000445667 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.8
USE1-202ENST00000445667 PDGFDQ9GZP0 370 aaPredicted RBP20.02■□□□□ 0.8
USE1-202ENST00000445667 NPC1L1Q9UHC9 1359 aa20.02■□□□□ 0.8
USE1-202ENST00000445667 IFNL2Q8IZJ0 200 aa20.01■□□□□ 0.79
USE1-202ENST00000445667 PHKG2P15735 406 aa20■□□□□ 0.79
USE1-202ENST00000445667 SULT6B1Q6IMI4 303 aa20■□□□□ 0.79
USE1-202ENST00000445667 LRP5O75197 1615 aa20■□□□□ 0.79
USE1-202ENST00000445667 ZNF827Q17R98 1081 aa19.98■□□□□ 0.79
USE1-202ENST00000445667 PLEKHO1Q53GL0 409 aaPredicted RBP19.98■□□□□ 0.79
USE1-202ENST00000445667 SLC27A3Q5K4L6 730 aa19.98■□□□□ 0.79
USE1-202ENST00000445667 PIGBQ92521 554 aa19.97■□□□□ 0.79
USE1-202ENST00000445667 TOGARAM1Q9Y4F4 1720 aa19.96■□□□□ 0.79
USE1-202ENST00000445667 DIAPH1O60610 1272 aaKnown RBP19.96■□□□□ 0.79
USE1-202ENST00000445667 SPON1Q9HCB6 807 aa19.96■□□□□ 0.79
USE1-202ENST00000445667 CCNL1Q9UK58 526 aaPredicted RBP19.96■□□□□ 0.79
USE1-202ENST00000445667 ZBTB7AO95365 584 aa19.95■□□□□ 0.78
USE1-202ENST00000445667 HMOX1P09601 288 aa19.95■□□□□ 0.78
USE1-202ENST00000445667 AMOTQ4VCS5 1084 aa19.95■□□□□ 0.78
USE1-202ENST00000445667 ZNF530Q6P9A1 599 aaPredicted RBP19.95■□□□□ 0.78
USE1-202ENST00000445667 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
USE1-202ENST00000445667 AKT1S1Q96B36 256 aa19.94■□□□□ 0.78
USE1-202ENST00000445667 KDRP35968 1356 aa19.94■□□□□ 0.78
USE1-202ENST00000445667 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
USE1-202ENST00000445667 TMOD3Q9NYL9 352 aa19.93■□□□□ 0.78
USE1-202ENST00000445667 ATF5Q9Y2D1 282 aaPredicted RBP19.93■□□□□ 0.78
USE1-202ENST00000445667 PALLDQ8WX93 1383 aa19.93■□□□□ 0.78
USE1-202ENST00000445667 LY75O60449 1722 aa19.93■□□□□ 0.78
USE1-202ENST00000445667 ITGB4P16144 1822 aa19.92■□□□□ 0.78
USE1-202ENST00000445667 CASZ1Q86V15 1759 aa19.92■□□□□ 0.78
USE1-202ENST00000445667 SMARCC1Q92922 1105 aaPredicted RBP19.91■□□□□ 0.78
USE1-202ENST00000445667 HSP90AB1P08238 724 aaKnown RBP19.9■□□□□ 0.78
USE1-202ENST00000445667 C1orf141Q5JVX7 400 aa19.9■□□□□ 0.78
USE1-202ENST00000445667 DCAF5Q96JK2 942 aa19.9■□□□□ 0.78
USE1-202ENST00000445667 TFCP2L1Q9NZI6 479 aa19.9■□□□□ 0.78
USE1-202ENST00000445667 ASAP1Q9ULH1 1129 aa19.9■□□□□ 0.78
USE1-202ENST00000445667 U2SURPO15042 1029 aaKnown RBP19.89■□□□□ 0.77
USE1-202ENST00000445667 PPP2R1AP30153 589 aa19.89■□□□□ 0.77
USE1-202ENST00000445667 PPP1R1BQ9UD71 204 aaPredicted RBP19.89■□□□□ 0.77
USE1-202ENST00000445667 COL3A1P02461 1466 aaPredicted RBP19.88■□□□□ 0.77
USE1-202ENST00000445667 ERVV-2B6SEH9 535 aa19.88■□□□□ 0.77
USE1-202ENST00000445667 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
USE1-202ENST00000445667 ATG3Q9NT62 314 aa19.87■□□□□ 0.77
USE1-202ENST00000445667 PNPLA7Q6ZV29 1317 aa19.86■□□□□ 0.77
USE1-202ENST00000445667 PTGER2P43116 358 aa19.86■□□□□ 0.77
USE1-202ENST00000445667 CABP4P57796 275 aa19.86■□□□□ 0.77
USE1-202ENST00000445667 CFAP53Q96M91 514 aa19.86■□□□□ 0.77
USE1-202ENST00000445667 MTFR1LQ9H019 292 aa19.86■□□□□ 0.77
USE1-202ENST00000445667 LOC102724428A0A0B4J2F2 783 aa19.85■□□□□ 0.77
USE1-202ENST00000445667 SIK1P57059 783 aa19.85■□□□□ 0.77
USE1-202ENST00000445667 MTHFSDQ2M296 383 aaKnown RBP19.85■□□□□ 0.77
USE1-202ENST00000445667 AKAP4Q5JQC9 854 aa19.84■□□□□ 0.77
USE1-202ENST00000445667 DDX10Q13206 875 aaKnown RBP19.83■□□□□ 0.77
USE1-202ENST00000445667 NFATC2IPQ8NCF5 419 aa19.83■□□□□ 0.77
USE1-202ENST00000445667 LGR6Q9HBX8 967 aa19.83■□□□□ 0.77
USE1-202ENST00000445667 MSH5O43196 834 aa19.82■□□□□ 0.76
USE1-202ENST00000445667 ATP6V1AP38606 617 aa19.82■□□□□ 0.76
USE1-202ENST00000445667 COL23A1Q86Y22 540 aaPredicted RBP19.82■□□□□ 0.76
USE1-202ENST00000445667 ITPK1Q13572 414 aa19.81■□□□□ 0.76
USE1-202ENST00000445667 LINC00116Q8NCU8 138 aa19.81■□□□□ 0.76
USE1-202ENST00000445667 SGIP1Q9BQI5 828 aa19.81■□□□□ 0.76
USE1-202ENST00000445667 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
USE1-202ENST00000445667 C5P01031 1676 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms