RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SLC4A2P04920 1241 aa21.2■□□□□ 0.98
LAPTM4B-201ENST00000445593 LRRC59Q96AG4 307 aaKnown RBP21.2■□□□□ 0.98
LAPTM4B-201ENST00000445593 F6X3S4 739 aa21.19■□□□□ 0.98
LAPTM4B-201ENST00000445593 HDAC1Q13547 482 aaPredicted RBP21.19■□□□□ 0.98
LAPTM4B-201ENST00000445593 MFAP1P55081 439 aaKnown RBP21.19■□□□□ 0.98
LAPTM4B-201ENST00000445593 RTL5Q5HYW3 569 aaPredicted RBP21.19■□□□□ 0.98
LAPTM4B-201ENST00000445593 PROSER2Q86WR7 435 aaPredicted RBP21.19■□□□□ 0.98
LAPTM4B-201ENST00000445593 DDX17Q92841 729 aaKnown RBP21.18■□□□□ 0.98
LAPTM4B-201ENST00000445593 ZNF428Q96B54 188 aa21.18■□□□□ 0.98
LAPTM4B-201ENST00000445593 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
LAPTM4B-201ENST00000445593 XRN1Q8IZH2 1706 aaKnown RBP21.18■□□□□ 0.98
LAPTM4B-201ENST00000445593 G2E3Q7L622 706 aa21.18■□□□□ 0.98
LAPTM4B-201ENST00000445593 IGSF1Q8N6C5 1336 aa21.17■□□□□ 0.98
LAPTM4B-201ENST00000445593 API5Q9BZZ5 524 aaKnown RBP21.17■□□□□ 0.98
LAPTM4B-201ENST00000445593 USP19O94966 1318 aa21.16■□□□□ 0.98
LAPTM4B-201ENST00000445593 ARHGEF10O15013 1369 aa21.16■□□□□ 0.98
LAPTM4B-201ENST00000445593 SIRT2Q8IXJ6 389 aa21.15■□□□□ 0.98
LAPTM4B-201ENST00000445593 SMC5Q8IY18 1101 aa21.15■□□□□ 0.98
LAPTM4B-201ENST00000445593 GAS2L2Q8NHY3 880 aa21.15■□□□□ 0.98
LAPTM4B-201ENST00000445593 PIK3R4Q99570 1358 aa21.15■□□□□ 0.98
LAPTM4B-201ENST00000445593 SPRYD3Q8NCJ5 442 aa21.14■□□□□ 0.98
LAPTM4B-201ENST00000445593 ABCC4O15439 1325 aa21.14■□□□□ 0.97
LAPTM4B-201ENST00000445593 NBPF6Q5VWK0 638 aa21.14■□□□□ 0.97
LAPTM4B-201ENST00000445593 NBPF4Q96M43 638 aa21.14■□□□□ 0.97
LAPTM4B-201ENST00000445593 UPF2Q9HAU5 1272 aaKnown RBP21.13■□□□□ 0.97
LAPTM4B-201ENST00000445593 ANKARQ7Z5J8 1434 aa21.13■□□□□ 0.97
LAPTM4B-201ENST00000445593 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
LAPTM4B-201ENST00000445593 ARHGAP45Q92619 1136 aa21.13■□□□□ 0.97
LAPTM4B-201ENST00000445593 HSPA2P54652 639 aa21.13■□□□□ 0.97
LAPTM4B-201ENST00000445593 NPHP4O75161 1426 aaPredicted RBP21.12■□□□□ 0.97
LAPTM4B-201ENST00000445593 CHD1LQ86WJ1 897 aa21.12■□□□□ 0.97
LAPTM4B-201ENST00000445593 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
LAPTM4B-201ENST00000445593 CRB1P82279 1406 aa21.11■□□□□ 0.97
LAPTM4B-201ENST00000445593 NALCNQ8IZF0 1738 aa21.11■□□□□ 0.97
LAPTM4B-201ENST00000445593 BRPF1P55201 1214 aaPredicted RBP21.11■□□□□ 0.97
LAPTM4B-201ENST00000445593 MEIS3Q99687 375 aa21.11■□□□□ 0.97
LAPTM4B-201ENST00000445593 ZC3H6P61129 1189 aaKnown RBP21.11■□□□□ 0.97
LAPTM4B-201ENST00000445593 SLKQ9H2G2 1235 aaPredicted RBP21.11■□□□□ 0.97
LAPTM4B-201ENST00000445593 NUCB1Q02818 461 aa21.1■□□□□ 0.97
LAPTM4B-201ENST00000445593 EIF2S2P20042 333 aaKnown RBP21.09■□□□□ 0.97
LAPTM4B-201ENST00000445593 KDRP35968 1356 aa21.08■□□□□ 0.97
LAPTM4B-201ENST00000445593 MSH6P52701 1360 aa21.08■□□□□ 0.97
LAPTM4B-201ENST00000445593 FMN2Q9NZ56 1722 aa21.08■□□□□ 0.97
LAPTM4B-201ENST00000445593 LGR6Q9HBX8 967 aa21.08■□□□□ 0.96
LAPTM4B-201ENST00000445593 ADGRL3Q9HAR2 1447 aa21.07■□□□□ 0.96
LAPTM4B-201ENST00000445593 GCP02774 474 aa21.07■□□□□ 0.96
LAPTM4B-201ENST00000445593 FKBP5Q13451 457 aaPredicted RBP21.07■□□□□ 0.96
LAPTM4B-201ENST00000445593 IP6K1Q92551 441 aa21.07■□□□□ 0.96
LAPTM4B-201ENST00000445593 STK31Q9BXU1 1019 aa21.07■□□□□ 0.96
LAPTM4B-201ENST00000445593 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
LAPTM4B-201ENST00000445593 C16orf71Q8IYS4 520 aaPredicted RBP21.06■□□□□ 0.96
LAPTM4B-201ENST00000445593 PODXL2Q9NZ53 605 aa21.06■□□□□ 0.96
LAPTM4B-201ENST00000445593 SMARCA5O60264 1052 aaPredicted RBP21.05■□□□□ 0.96
LAPTM4B-201ENST00000445593 KRT28Q7Z3Y7 464 aa21.05■□□□□ 0.96
LAPTM4B-201ENST00000445593 CABLES1Q8TDN4 633 aa21.05■□□□□ 0.96
LAPTM4B-201ENST00000445593 RGPD1P0DJD0 1748 aa21.04■□□□□ 0.96
LAPTM4B-201ENST00000445593 CHD2O14647 1828 aaKnown RBP21.04■□□□□ 0.96
LAPTM4B-201ENST00000445593 ANXA1P04083 346 aa21.04■□□□□ 0.96
LAPTM4B-201ENST00000445593 KCNQ3O43525 872 aa21.03■□□□□ 0.96
LAPTM4B-201ENST00000445593 HAP1P54257 671 aaPredicted RBP21.03■□□□□ 0.96
LAPTM4B-201ENST00000445593 CHMP4BQ9H444 224 aaKnown RBP21.03■□□□□ 0.96
LAPTM4B-201ENST00000445593 MAP3K5Q99683 1374 aa21.03■□□□□ 0.96
LAPTM4B-201ENST00000445593 ZNF530Q6P9A1 599 aaPredicted RBP21.03■□□□□ 0.96
LAPTM4B-201ENST00000445593 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
LAPTM4B-201ENST00000445593 AXIN2Q9Y2T1 843 aa21.03■□□□□ 0.96
LAPTM4B-201ENST00000445593 TBC1D32Q96NH3 1257 aa21.02■□□□□ 0.96
LAPTM4B-201ENST00000445593 KIAA0232Q92628 1395 aa21.02■□□□□ 0.95
LAPTM4B-201ENST00000445593 TAF7Q15545 349 aaPredicted RBP21.01■□□□□ 0.95
LAPTM4B-201ENST00000445593 INTS3Q68E01 1043 aaKnown RBP21.01■□□□□ 0.95
LAPTM4B-201ENST00000445593 GCC1Q96CN9 775 aa21.01■□□□□ 0.95
LAPTM4B-201ENST00000445593 C22orf23Q9BZE7 217 aa21.01■□□□□ 0.95
LAPTM4B-201ENST00000445593 RGS12O14924 1447 aa21.01■□□□□ 0.95
LAPTM4B-201ENST00000445593 KCNH5Q8NCM2 988 aa21.01■□□□□ 0.95
LAPTM4B-201ENST00000445593 FLIIQ13045 1269 aa21■□□□□ 0.95
LAPTM4B-201ENST00000445593 ANKRD24Q8TF21 1146 aa21■□□□□ 0.95
LAPTM4B-201ENST00000445593 ADAMTSL3P82987 1691 aa21■□□□□ 0.95
LAPTM4B-201ENST00000445593 ATF3P18847 181 aa21■□□□□ 0.95
LAPTM4B-201ENST00000445593 HDGFL1Q5TGJ6 251 aa21■□□□□ 0.95
LAPTM4B-201ENST00000445593 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
LAPTM4B-201ENST00000445593 CEP85Q6P2H3 762 aa20.99■□□□□ 0.95
LAPTM4B-201ENST00000445593 TEFQ10587 303 aa20.98■□□□□ 0.95
LAPTM4B-201ENST00000445593 NFKBIBQ15653 356 aa20.98■□□□□ 0.95
LAPTM4B-201ENST00000445593 PTPRCP08575 1304 aa20.97■□□□□ 0.95
LAPTM4B-201ENST00000445593 CHRNA2Q15822 529 aa20.97■□□□□ 0.95
LAPTM4B-201ENST00000445593 CCDC30Q5VVM6 783 aa20.97■□□□□ 0.95
LAPTM4B-201ENST00000445593 C19orf44Q9H6X5 657 aa20.97■□□□□ 0.95
LAPTM4B-201ENST00000445593 BECN1Q14457 450 aa20.97■□□□□ 0.95
LAPTM4B-201ENST00000445593 NWD1Q149M9 1564 aa20.96■□□□□ 0.95
LAPTM4B-201ENST00000445593 EXOC6BQ9Y2D4 811 aa20.96■□□□□ 0.95
LAPTM4B-201ENST00000445593 ARHGEF25Q86VW2 580 aa20.96■□□□□ 0.95
LAPTM4B-201ENST00000445593 NLRP2Q9NX02 1062 aa20.96■□□□□ 0.95
LAPTM4B-201ENST00000445593 MARF1Q9Y4F3 1742 aaKnown RBP20.96■□□□□ 0.95
LAPTM4B-201ENST00000445593 TSHZ3Q63HK5 1081 aa20.95■□□□□ 0.94
LAPTM4B-201ENST00000445593 TBC1D2Q9BYX2 928 aa20.95■□□□□ 0.94
LAPTM4B-201ENST00000445593 RTL1A6NKG5 1358 aa20.95■□□□□ 0.94
LAPTM4B-201ENST00000445593 ANKRD44Q8N8A2 993 aa20.95■□□□□ 0.94
LAPTM4B-201ENST00000445593 TMEM94Q12767 1356 aa20.95■□□□□ 0.94
LAPTM4B-201ENST00000445593 LTN1O94822 1766 aa20.95■□□□□ 0.94
LAPTM4B-201ENST00000445593 FRAT2O75474 233 aaPredicted RBP20.94■□□□□ 0.94
LAPTM4B-201ENST00000445593 CSB-PGBD3P0DP91 1061 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms