RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 TATP17735 454 aaPredicted RBP20.94■□□□□ 0.94
SEC22C-208ENST00000445388 R3HDM1Q15032 1099 aaKnown RBP20.94■□□□□ 0.94
SEC22C-208ENST00000445388 EYA1Q99502 592 aa20.94■□□□□ 0.94
SEC22C-208ENST00000445388 RREB1Q92766 1687 aa20.93■□□□□ 0.94
SEC22C-208ENST00000445388 EIF4A2Q14240 407 aaKnown RBP20.93■□□□□ 0.94
SEC22C-208ENST00000445388 PROM2Q8N271 834 aa20.93■□□□□ 0.94
SEC22C-208ENST00000445388 SHANK3Q9BYB0 1731 aa20.92■□□□□ 0.94
SEC22C-208ENST00000445388 NUP188Q5SRE5 1749 aa20.91■□□□□ 0.94
SEC22C-208ENST00000445388 CC2D1BQ5T0F9 858 aaKnown RBP20.91■□□□□ 0.94
SEC22C-208ENST00000445388 NHSQ6T4R5 1651 aa20.91■□□□□ 0.94
SEC22C-208ENST00000445388 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
SEC22C-208ENST00000445388 NCAPD2Q15021 1401 aa20.89■□□□□ 0.94
SEC22C-208ENST00000445388 PRIM1P49642 420 aaKnown RBP20.88■□□□□ 0.93
SEC22C-208ENST00000445388 TXNRD1Q16881 649 aa20.87■□□□□ 0.93
SEC22C-208ENST00000445388 NBPF14Q5TI25 921 aa20.87■□□□□ 0.93
SEC22C-208ENST00000445388 SYTL4Q96C24 671 aaPredicted RBP20.87■□□□□ 0.93
SEC22C-208ENST00000445388 RGPD3A6NKT7 1758 aaPredicted RBP20.87■□□□□ 0.93
SEC22C-208ENST00000445388 RGPD4Q7Z3J3 1758 aa20.87■□□□□ 0.93
SEC22C-208ENST00000445388 CYP27B1O15528 508 aa20.85■□□□□ 0.93
SEC22C-208ENST00000445388 BTAF1O14981 1849 aa20.85■□□□□ 0.93
SEC22C-208ENST00000445388 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
SEC22C-208ENST00000445388 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
SEC22C-208ENST00000445388 KAT6BQ8WYB5 2073 aa20.84■□□□□ 0.93
SEC22C-208ENST00000445388 ANO8Q9HCE9 1232 aaPredicted RBP20.84■□□□□ 0.93
SEC22C-208ENST00000445388 IGSF1Q8N6C5 1336 aa20.83■□□□□ 0.93
SEC22C-208ENST00000445388 MTHFSP49914 203 aa20.83■□□□□ 0.93
SEC22C-208ENST00000445388 DOT1LQ8TEK3 1739 aa20.83■□□□□ 0.92
SEC22C-208ENST00000445388 SPG7Q9UQ90 795 aa20.81■□□□□ 0.92
SEC22C-208ENST00000445388 PKD1L3Q7Z443 1732 aa20.81■□□□□ 0.92
SEC22C-208ENST00000445388 IL13P35225 146 aa20.8■□□□□ 0.92
SEC22C-208ENST00000445388 NPC1L1Q9UHC9 1359 aa20.8■□□□□ 0.92
SEC22C-208ENST00000445388 AEBP1Q8IUX7 1158 aa20.79■□□□□ 0.92
SEC22C-208ENST00000445388 LRRC4BQ9NT99 713 aa20.79■□□□□ 0.92
SEC22C-208ENST00000445388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.78■□□□□ 0.92
SEC22C-208ENST00000445388 KCNQ4P56696 695 aa20.77■□□□□ 0.92
SEC22C-208ENST00000445388 SRCAPQ6ZRS2 3230 aa20.77■□□□□ 0.92
SEC22C-208ENST00000445388 PHKG2P15735 406 aa20.76■□□□□ 0.91
SEC22C-208ENST00000445388 NKX1-1Q15270 411 aaPredicted RBP20.76■□□□□ 0.91
SEC22C-208ENST00000445388 SULT6B1Q6IMI4 303 aa20.76■□□□□ 0.91
SEC22C-208ENST00000445388 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
SEC22C-208ENST00000445388 PDGFDQ9GZP0 370 aaPredicted RBP20.76■□□□□ 0.91
SEC22C-208ENST00000445388 SLC15A2Q16348 729 aa20.75■□□□□ 0.91
SEC22C-208ENST00000445388 STK32BQ9NY57 414 aa20.75■□□□□ 0.91
SEC22C-208ENST00000445388 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
SEC22C-208ENST00000445388 TOGARAM1Q9Y4F4 1720 aa20.74■□□□□ 0.91
SEC22C-208ENST00000445388 LRP5O75197 1615 aa20.73■□□□□ 0.91
SEC22C-208ENST00000445388 ZNF827Q17R98 1081 aa20.72■□□□□ 0.91
SEC22C-208ENST00000445388 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
SEC22C-208ENST00000445388 DIAPH1O60610 1272 aaKnown RBP20.71■□□□□ 0.91
SEC22C-208ENST00000445388 HMOX1P09601 288 aa20.71■□□□□ 0.91
SEC22C-208ENST00000445388 SLC27A3Q5K4L6 730 aa20.71■□□□□ 0.91
SEC22C-208ENST00000445388 PIGBQ92521 554 aa20.71■□□□□ 0.91
SEC22C-208ENST00000445388 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
SEC22C-208ENST00000445388 ITGB4P16144 1822 aa20.7■□□□□ 0.9
SEC22C-208ENST00000445388 KDRP35968 1356 aa20.7■□□□□ 0.9
SEC22C-208ENST00000445388 LY75O60449 1722 aa20.7■□□□□ 0.9
SEC22C-208ENST00000445388 AMOTQ4VCS5 1084 aa20.69■□□□□ 0.9
SEC22C-208ENST00000445388 ZNF530Q6P9A1 599 aaPredicted RBP20.69■□□□□ 0.9
SEC22C-208ENST00000445388 CCNL1Q9UK58 526 aaPredicted RBP20.69■□□□□ 0.9
SEC22C-208ENST00000445388 PLEKHG2Q9H7P9 1386 aa20.69■□□□□ 0.9
SEC22C-208ENST00000445388 AKT1S1Q96B36 256 aa20.68■□□□□ 0.9
SEC22C-208ENST00000445388 CASZ1Q86V15 1759 aa20.67■□□□□ 0.9
SEC22C-208ENST00000445388 PALLDQ8WX93 1383 aa20.67■□□□□ 0.9
SEC22C-208ENST00000445388 COL3A1P02461 1466 aaPredicted RBP20.67■□□□□ 0.9
SEC22C-208ENST00000445388 ZBTB7AO95365 584 aa20.66■□□□□ 0.9
SEC22C-208ENST00000445388 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
SEC22C-208ENST00000445388 SPON1Q9HCB6 807 aa20.66■□□□□ 0.9
SEC22C-208ENST00000445388 TMOD3Q9NYL9 352 aa20.66■□□□□ 0.9
SEC22C-208ENST00000445388 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
SEC22C-208ENST00000445388 DCAF5Q96JK2 942 aa20.64■□□□□ 0.89
SEC22C-208ENST00000445388 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.89
SEC22C-208ENST00000445388 ATF5Q9Y2D1 282 aaPredicted RBP20.64■□□□□ 0.89
SEC22C-208ENST00000445388 KDM6AO15550 1401 aaPredicted RBP20.63■□□□□ 0.89
SEC22C-208ENST00000445388 HSP90AB1P08238 724 aaKnown RBP20.63■□□□□ 0.89
SEC22C-208ENST00000445388 C1orf141Q5JVX7 400 aa20.63■□□□□ 0.89
SEC22C-208ENST00000445388 SMARCC1Q92922 1105 aaPredicted RBP20.63■□□□□ 0.89
SEC22C-208ENST00000445388 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
SEC22C-208ENST00000445388 TFCP2L1Q9NZI6 479 aa20.62■□□□□ 0.89
SEC22C-208ENST00000445388 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
SEC22C-208ENST00000445388 ATG3Q9NT62 314 aa20.61■□□□□ 0.89
SEC22C-208ENST00000445388 PNPLA7Q6ZV29 1317 aa20.6■□□□□ 0.89
SEC22C-208ENST00000445388 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
SEC22C-208ENST00000445388 CFAP53Q96M91 514 aa20.6■□□□□ 0.89
SEC22C-208ENST00000445388 CABP4P57796 275 aa20.59■□□□□ 0.89
SEC22C-208ENST00000445388 AKAP4Q5JQC9 854 aa20.59■□□□□ 0.89
SEC22C-208ENST00000445388 LOC102724428A0A0B4J2F2 783 aa20.58■□□□□ 0.89
SEC22C-208ENST00000445388 PTGER2P43116 358 aa20.58■□□□□ 0.89
SEC22C-208ENST00000445388 SIK1P57059 783 aa20.58■□□□□ 0.89
SEC22C-208ENST00000445388 LGR6Q9HBX8 967 aa20.58■□□□□ 0.89
SEC22C-208ENST00000445388 NFATC2IPQ8NCF5 419 aa20.57■□□□□ 0.88
SEC22C-208ENST00000445388 MTFR1LQ9H019 292 aa20.57■□□□□ 0.88
SEC22C-208ENST00000445388 PPP1R1BQ9UD71 204 aaPredicted RBP20.57■□□□□ 0.88
SEC22C-208ENST00000445388 TUBGCP6Q96RT7 1819 aa20.57■□□□□ 0.88
SEC22C-208ENST00000445388 C5P01031 1676 aa20.57■□□□□ 0.88
SEC22C-208ENST00000445388 TAF1LQ8IZX4 1826 aa20.55■□□□□ 0.88
SEC22C-208ENST00000445388 ATP6V1AP38606 617 aa20.55■□□□□ 0.88
SEC22C-208ENST00000445388 ITPK1Q13572 414 aa20.55■□□□□ 0.88
SEC22C-208ENST00000445388 SMIM5Q71RC9 77 aa20.55■□□□□ 0.88
SEC22C-208ENST00000445388 LINC00116Q8NCU8 138 aa20.55■□□□□ 0.88
SEC22C-208ENST00000445388 RNMTO43148 476 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms