RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 NBPF6Q5VWK0 638 aa32.53■■■□□ 2.8
C9orf3-207ENST00000445181 ACSBG1Q96GR2 724 aa32.53■■■□□ 2.8
C9orf3-207ENST00000445181 NBPF4Q96M43 638 aa32.53■■■□□ 2.8
C9orf3-207ENST00000445181 NPC1L1Q9UHC9 1359 aa32.53■■■□□ 2.8
C9orf3-207ENST00000445181 DDX54Q8TDD1 881 aaKnown RBP32.52■■■□□ 2.8
C9orf3-207ENST00000445181 LRP5O75197 1615 aa32.51■■■□□ 2.8
C9orf3-207ENST00000445181 RGPD3A6NKT7 1758 aaPredicted RBP32.51■■■□□ 2.79
C9orf3-207ENST00000445181 RGPD4Q7Z3J3 1758 aa32.51■■■□□ 2.79
C9orf3-207ENST00000445181 USHBP1Q8N6Y0 703 aa32.51■■■□□ 2.79
C9orf3-207ENST00000445181 PROM2Q8N271 834 aa32.5■■■□□ 2.79
C9orf3-207ENST00000445181 EIF4A2Q14240 407 aaKnown RBP32.45■■■□□ 2.79
C9orf3-207ENST00000445181 TXNRD1Q16881 649 aa32.45■■■□□ 2.79
C9orf3-207ENST00000445181 ZCRB1Q8TBF4 217 aaKnown RBP32.45■■■□□ 2.79
C9orf3-207ENST00000445181 RAPGEF4Q8WZA2 1011 aa32.45■■■□□ 2.79
C9orf3-207ENST00000445181 NHSQ6T4R5 1651 aa32.45■■■□□ 2.79
C9orf3-207ENST00000445181 MEGF6O75095 1541 aa32.42■■■□□ 2.78
C9orf3-207ENST00000445181 MTHFSP49914 203 aa32.42■■■□□ 2.78
C9orf3-207ENST00000445181 DDX10Q13206 875 aaKnown RBP32.41■■■□□ 2.78
C9orf3-207ENST00000445181 EYA1Q99502 592 aa32.41■■■□□ 2.78
C9orf3-207ENST00000445181 ANO8Q9HCE9 1232 aaPredicted RBP32.41■■■□□ 2.78
C9orf3-207ENST00000445181 TATP17735 454 aaPredicted RBP32.4■■■□□ 2.78
C9orf3-207ENST00000445181 KAT6BQ8WYB5 2073 aa32.37■■■□□ 2.77
C9orf3-207ENST00000445181 STK32BQ9NY57 414 aa32.34■■■□□ 2.77
C9orf3-207ENST00000445181 BTAF1O14981 1849 aa32.34■■■□□ 2.77
C9orf3-207ENST00000445181 PRIM1P49642 420 aaKnown RBP32.33■■■□□ 2.77
C9orf3-207ENST00000445181 SYTL4Q96C24 671 aaPredicted RBP32.33■■■□□ 2.77
C9orf3-207ENST00000445181 NCAPD2Q15021 1401 aa32.32■■■□□ 2.76
C9orf3-207ENST00000445181 SHANK3Q9BYB0 1731 aa32.31■■■□□ 2.76
C9orf3-207ENST00000445181 IGSF1Q8N6C5 1336 aa32.3■■■□□ 2.76
C9orf3-207ENST00000445181 SPON1Q9HCB6 807 aa32.3■■■□□ 2.76
C9orf3-207ENST00000445181 IL13P35225 146 aa32.29■■■□□ 2.76
C9orf3-207ENST00000445181 SLC15A2Q16348 729 aa32.29■■■□□ 2.76
C9orf3-207ENST00000445181 DIAPH1O60610 1272 aaKnown RBP32.27■■■□□ 2.76
C9orf3-207ENST00000445181 PDGFDQ9GZP0 370 aaPredicted RBP32.27■■■□□ 2.76
C9orf3-207ENST00000445181 PPP2R1AP30153 589 aa32.26■■■□□ 2.75
C9orf3-207ENST00000445181 PCDH11XQ9BZA7 1347 aa32.26■■■□□ 2.75
C9orf3-207ENST00000445181 PCDH11YQ9BZA8 1340 aa32.26■■■□□ 2.75
C9orf3-207ENST00000445181 CFAP53Q96M91 514 aa32.25■■■□□ 2.75
C9orf3-207ENST00000445181 DOT1LQ8TEK3 1739 aa32.25■■■□□ 2.75
C9orf3-207ENST00000445181 LRRC4BQ9NT99 713 aa32.24■■■□□ 2.75
C9orf3-207ENST00000445181 SPG7Q9UQ90 795 aa32.24■■■□□ 2.75
C9orf3-207ENST00000445181 ZNF316A6NFI3 1004 aaPredicted RBP32.23■■■□□ 2.75
C9orf3-207ENST00000445181 SULT6B1Q6IMI4 303 aa32.23■■■□□ 2.75
C9orf3-207ENST00000445181 CYP27B1O15528 508 aa32.21■■■□□ 2.75
C9orf3-207ENST00000445181 SLC27A3Q5K4L6 730 aa32.21■■■□□ 2.75
C9orf3-207ENST00000445181 AEBP1Q8IUX7 1158 aa32.21■■■□□ 2.75
C9orf3-207ENST00000445181 CASZ1Q86V15 1759 aa32.21■■■□□ 2.75
C9orf3-207ENST00000445181 ZBTB7AO95365 584 aa32.2■■■□□ 2.75
C9orf3-207ENST00000445181 PPP1R1BQ9UD71 204 aaPredicted RBP32.2■■■□□ 2.75
C9orf3-207ENST00000445181 PKD1L3Q7Z443 1732 aa32.19■■■□□ 2.74
C9orf3-207ENST00000445181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.18■■■□□ 2.74
C9orf3-207ENST00000445181 COL3A1P02461 1466 aaPredicted RBP32.17■■■□□ 2.74
C9orf3-207ENST00000445181 U2SURPO15042 1029 aaKnown RBP32.17■■■□□ 2.74
C9orf3-207ENST00000445181 PAPPAQ13219 1627 aa32.17■■■□□ 2.74
C9orf3-207ENST00000445181 KCNQ4P56696 695 aa32.16■■■□□ 2.74
C9orf3-207ENST00000445181 ZNF827Q17R98 1081 aa32.16■■■□□ 2.74
C9orf3-207ENST00000445181 HMOX1P09601 288 aa32.15■■■□□ 2.74
C9orf3-207ENST00000445181 RALBP1Q15311 655 aa32.15■■■□□ 2.74
C9orf3-207ENST00000445181 PLEKHO1Q53GL0 409 aaPredicted RBP32.15■■■□□ 2.74
C9orf3-207ENST00000445181 PLEKHG2Q9H7P9 1386 aa32.15■■■□□ 2.74
C9orf3-207ENST00000445181 ATF5Q9Y2D1 282 aaPredicted RBP32.14■■■□□ 2.74
C9orf3-207ENST00000445181 KDRP35968 1356 aa32.14■■■□□ 2.74
C9orf3-207ENST00000445181 AMOTQ4VCS5 1084 aa32.12■■■□□ 2.73
C9orf3-207ENST00000445181 MPRIPQ6WCQ1 1025 aa32.12■■■□□ 2.73
C9orf3-207ENST00000445181 AKT1S1Q96B36 256 aa32.12■■■□□ 2.73
C9orf3-207ENST00000445181 IFNL2Q8IZJ0 200 aa32.11■■■□□ 2.73
C9orf3-207ENST00000445181 CCNL1Q9UK58 526 aaPredicted RBP32.11■■■□□ 2.73
C9orf3-207ENST00000445181 NUDCQ9Y266 331 aa32.11■■■□□ 2.73
C9orf3-207ENST00000445181 NKX1-1Q15270 411 aaPredicted RBP32.1■■■□□ 2.73
C9orf3-207ENST00000445181 MTFR1LQ9H019 292 aa32.1■■■□□ 2.73
C9orf3-207ENST00000445181 LY75O60449 1722 aa32.09■■■□□ 2.73
C9orf3-207ENST00000445181 PHKG2P15735 406 aa32.08■■■□□ 2.73
C9orf3-207ENST00000445181 PTGER2P43116 358 aa32.08■■■□□ 2.73
C9orf3-207ENST00000445181 ZNF530Q6P9A1 599 aaPredicted RBP32.08■■■□□ 2.73
C9orf3-207ENST00000445181 TFCP2L1Q9NZI6 479 aa32.05■■■□□ 2.72
C9orf3-207ENST00000445181 C1orf141Q5JVX7 400 aa32.04■■■□□ 2.72
C9orf3-207ENST00000445181 TOGARAM1Q9Y4F4 1720 aa32.03■■■□□ 2.72
C9orf3-207ENST00000445181 U2AF1L5P0DN76 240 aaPredicted RBP32.03■■■□□ 2.72
C9orf3-207ENST00000445181 U2AF1Q01081 240 aaKnown RBP eCLIP32.03■■■□□ 2.72
C9orf3-207ENST00000445181 PIGBQ92521 554 aa32.02■■■□□ 2.72
C9orf3-207ENST00000445181 PALLDQ8WX93 1383 aa32.02■■■□□ 2.72
C9orf3-207ENST00000445181 MYBBP1AQ9BQG0 1328 aaKnown RBP32.01■■■□□ 2.72
C9orf3-207ENST00000445181 HSP90AB1P08238 724 aaKnown RBP32.01■■■□□ 2.71
C9orf3-207ENST00000445181 SMARCC1Q92922 1105 aaPredicted RBP32.01■■■□□ 2.71
C9orf3-207ENST00000445181 PNPLA7Q6ZV29 1317 aa32■■■□□ 2.71
C9orf3-207ENST00000445181 ITGB4P16144 1822 aa32■■■□□ 2.71
C9orf3-207ENST00000445181 SGIP1Q9BQI5 828 aa31.99■■■□□ 2.71
C9orf3-207ENST00000445181 SLC16A10Q8TF71 515 aa31.98■■■□□ 2.71
C9orf3-207ENST00000445181 PRKRIP1Q9H875 184 aaPredicted RBP31.98■■■□□ 2.71
C9orf3-207ENST00000445181 TMOD3Q9NYL9 352 aa31.98■■■□□ 2.71
C9orf3-207ENST00000445181 DCAF5Q96JK2 942 aa31.97■■■□□ 2.71
C9orf3-207ENST00000445181 QSER1Q2KHR3 1735 aa31.95■■■□□ 2.71
C9orf3-207ENST00000445181 HMGB2P26583 209 aaKnown RBP31.95■■■□□ 2.71
C9orf3-207ENST00000445181 PRKAR2BP31323 418 aa31.95■■■□□ 2.71
C9orf3-207ENST00000445181 MTHFSDQ2M296 383 aaKnown RBP31.94■■■□□ 2.7
C9orf3-207ENST00000445181 AKAP4Q5JQC9 854 aa31.94■■■□□ 2.7
C9orf3-207ENST00000445181 RSPH6AQ9H0K4 717 aa31.94■■■□□ 2.7
C9orf3-207ENST00000445181 ARXQ96QS3 562 aa31.92■■■□□ 2.7
C9orf3-207ENST00000445181 TUBGCP6Q96RT7 1819 aa31.91■■■□□ 2.7
C9orf3-207ENST00000445181 FCHSD2O94868 740 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms