RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 RREB1Q92766 1687 aa25.76■■□□□ 1.71
LRRC42-204ENST00000444987 SHANK3Q9BYB0 1731 aa25.76■■□□□ 1.71
LRRC42-204ENST00000444987 USHBP1Q8N6Y0 703 aa25.75■■□□□ 1.71
LRRC42-204ENST00000444987 EZH2Q15910 746 aaKnown RBP25.74■■□□□ 1.71
LRRC42-204ENST00000444987 EIF4A2Q14240 407 aaKnown RBP25.73■■□□□ 1.71
LRRC42-204ENST00000444987 EYA1Q99502 592 aa25.73■■□□□ 1.71
LRRC42-204ENST00000444987 DDX54Q8TDD1 881 aaKnown RBP25.72■■□□□ 1.71
LRRC42-204ENST00000444987 PKD1L3Q7Z443 1732 aa25.71■■□□□ 1.71
LRRC42-204ENST00000444987 IGSF1Q8N6C5 1336 aa25.69■■□□□ 1.7
LRRC42-204ENST00000444987 PCDH11XQ9BZA7 1347 aa25.69■■□□□ 1.7
LRRC42-204ENST00000444987 PCDH11YQ9BZA8 1340 aa25.69■■□□□ 1.7
LRRC42-204ENST00000444987 ZEB1P37275 1124 aaPredicted RBP25.69■■□□□ 1.7
LRRC42-204ENST00000444987 CC2D1BQ5T0F9 858 aaKnown RBP25.69■■□□□ 1.7
LRRC42-204ENST00000444987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.69■■□□□ 1.7
LRRC42-204ENST00000444987 NUP188Q5SRE5 1749 aa25.68■■□□□ 1.7
LRRC42-204ENST00000444987 SPG7Q9UQ90 795 aa25.66■■□□□ 1.7
LRRC42-204ENST00000444987 BTAF1O14981 1849 aa25.65■■□□□ 1.7
LRRC42-204ENST00000444987 KCNQ2O43526 872 aa25.65■■□□□ 1.7
LRRC42-204ENST00000444987 MTHFSP49914 203 aa25.65■■□□□ 1.7
LRRC42-204ENST00000444987 PTF1AQ7RTS3 328 aa25.65■■□□□ 1.7
LRRC42-204ENST00000444987 DOT1LQ8TEK3 1739 aa25.65■■□□□ 1.7
LRRC42-204ENST00000444987 ACSBG1Q96GR2 724 aa25.64■■□□□ 1.7
LRRC42-204ENST00000444987 NBPF14Q5TI25 921 aa25.63■■□□□ 1.69
LRRC42-204ENST00000444987 KAT6BQ8WYB5 2073 aa25.62■■□□□ 1.69
LRRC42-204ENST00000444987 IL13P35225 146 aa25.61■■□□□ 1.69
LRRC42-204ENST00000444987 CYP27B1O15528 508 aa25.59■■□□□ 1.69
LRRC42-204ENST00000444987 NKX1-1Q15270 411 aaPredicted RBP25.59■■□□□ 1.69
LRRC42-204ENST00000444987 KDRP35968 1356 aa25.58■■□□□ 1.69
LRRC42-204ENST00000444987 PRIM1P49642 420 aaKnown RBP25.58■■□□□ 1.69
LRRC42-204ENST00000444987 TXNRD1Q16881 649 aa25.57■■□□□ 1.68
LRRC42-204ENST00000444987 AMOTQ4VCS5 1084 aa25.56■■□□□ 1.68
LRRC42-204ENST00000444987 IFNL2Q8IZJ0 200 aa25.56■■□□□ 1.68
LRRC42-204ENST00000444987 PROM2Q8N271 834 aa25.56■■□□□ 1.68
LRRC42-204ENST00000444987 DIAPH1O60610 1272 aaKnown RBP25.55■■□□□ 1.68
LRRC42-204ENST00000444987 R3HDM1Q15032 1099 aaKnown RBP25.54■■□□□ 1.68
LRRC42-204ENST00000444987 PLEKHO1Q53GL0 409 aaPredicted RBP25.54■■□□□ 1.68
LRRC42-204ENST00000444987 SYTL4Q96C24 671 aaPredicted RBP25.54■■□□□ 1.68
LRRC42-204ENST00000444987 SULT6B1Q6IMI4 303 aa25.53■■□□□ 1.68
LRRC42-204ENST00000444987 LY75O60449 1722 aa25.52■■□□□ 1.68
LRRC42-204ENST00000444987 PSDA5PKW4 1024 aaPredicted RBP25.52■■□□□ 1.68
LRRC42-204ENST00000444987 PHKG2P15735 406 aa25.52■■□□□ 1.68
LRRC42-204ENST00000444987 SLC27A3Q5K4L6 730 aa25.52■■□□□ 1.68
LRRC42-204ENST00000444987 COL3A1P02461 1466 aaPredicted RBP25.52■■□□□ 1.68
LRRC42-204ENST00000444987 ITGB4P16144 1822 aa25.51■■□□□ 1.67
LRRC42-204ENST00000444987 CFAP53Q96M91 514 aa25.51■■□□□ 1.67
LRRC42-204ENST00000444987 TOGARAM1Q9Y4F4 1720 aa25.51■■□□□ 1.67
LRRC42-204ENST00000444987 HSP90AB1P08238 724 aaKnown RBP25.5■■□□□ 1.67
LRRC42-204ENST00000444987 HMGB2P26583 209 aaKnown RBP25.5■■□□□ 1.67
LRRC42-204ENST00000444987 CNGB1Q14028 1251 aaPredicted RBP25.5■■□□□ 1.67
LRRC42-204ENST00000444987 LRP5O75197 1615 aa25.49■■□□□ 1.67
LRRC42-204ENST00000444987 AEBP1Q8IUX7 1158 aa25.49■■□□□ 1.67
LRRC42-204ENST00000444987 PAPPAQ13219 1627 aa25.48■■□□□ 1.67
LRRC42-204ENST00000444987 PPP2R1AP30153 589 aa25.47■■□□□ 1.67
LRRC42-204ENST00000444987 DCAF5Q96JK2 942 aa25.46■■□□□ 1.67
LRRC42-204ENST00000444987 STK32BQ9NY57 414 aa25.46■■□□□ 1.67
LRRC42-204ENST00000444987 ZNF530Q6P9A1 599 aaPredicted RBP25.44■■□□□ 1.66
LRRC42-204ENST00000444987 MPRIPQ6WCQ1 1025 aa25.44■■□□□ 1.66
LRRC42-204ENST00000444987 SMARCC1Q92922 1105 aaPredicted RBP25.44■■□□□ 1.66
LRRC42-204ENST00000444987 ANO8Q9HCE9 1232 aaPredicted RBP25.44■■□□□ 1.66
LRRC42-204ENST00000444987 ERVV-2B6SEH9 535 aa25.43■■□□□ 1.66
LRRC42-204ENST00000444987 SLC15A2Q16348 729 aa25.43■■□□□ 1.66
LRRC42-204ENST00000444987 C1orf141Q5JVX7 400 aa25.43■■□□□ 1.66
LRRC42-204ENST00000444987 LRRC4BQ9NT99 713 aa25.42■■□□□ 1.66
LRRC42-204ENST00000444987 TMOD3Q9NYL9 352 aa25.42■■□□□ 1.66
LRRC42-204ENST00000444987 NUDCQ9Y266 331 aa25.42■■□□□ 1.66
LRRC42-204ENST00000444987 HMOX1P09601 288 aa25.4■■□□□ 1.66
LRRC42-204ENST00000444987 PIGBQ92521 554 aa25.4■■□□□ 1.66
LRRC42-204ENST00000444987 PALLDQ8WX93 1383 aa25.4■■□□□ 1.66
LRRC42-204ENST00000444987 QSER1Q2KHR3 1735 aa25.4■■□□□ 1.66
LRRC42-204ENST00000444987 CASZ1Q86V15 1759 aa25.39■■□□□ 1.66
LRRC42-204ENST00000444987 U2SURPO15042 1029 aaKnown RBP25.39■■□□□ 1.66
LRRC42-204ENST00000444987 DDX10Q13206 875 aaKnown RBP25.39■■□□□ 1.66
LRRC42-204ENST00000444987 AKAP4Q5JQC9 854 aa25.39■■□□□ 1.66
LRRC42-204ENST00000444987 CCNL1Q9UK58 526 aaPredicted RBP25.39■■□□□ 1.66
LRRC42-204ENST00000444987 RALBP1Q15311 655 aa25.38■■□□□ 1.65
LRRC42-204ENST00000444987 KDM6AO15550 1401 aaPredicted RBP25.37■■□□□ 1.65
LRRC42-204ENST00000444987 SCN11AQ9UI33 1791 aa25.36■■□□□ 1.65
LRRC42-204ENST00000444987 AKT1S1Q96B36 256 aa25.36■■□□□ 1.65
LRRC42-204ENST00000444987 C5P01031 1676 aa25.35■■□□□ 1.65
LRRC42-204ENST00000444987 TAF1LQ8IZX4 1826 aa25.34■■□□□ 1.65
LRRC42-204ENST00000444987 ZNF831Q5JPB2 1677 aa25.32■■□□□ 1.64
LRRC42-204ENST00000444987 ADAMTS7Q9UKP4 1686 aa25.32■■□□□ 1.64
LRRC42-204ENST00000444987 CABP4P57796 275 aa25.32■■□□□ 1.64
LRRC42-204ENST00000444987 SPON1Q9HCB6 807 aa25.32■■□□□ 1.64
LRRC42-204ENST00000444987 FCHSD2O94868 740 aa25.31■■□□□ 1.64
LRRC42-204ENST00000444987 ZNF827Q17R98 1081 aa25.31■■□□□ 1.64
LRRC42-204ENST00000444987 MTHFSDQ2M296 383 aaKnown RBP25.31■■□□□ 1.64
LRRC42-204ENST00000444987 GAS2L2Q8NHY3 880 aa25.31■■□□□ 1.64
LRRC42-204ENST00000444987 VIRMAQ69YN4 1812 aaKnown RBP25.3■■□□□ 1.64
LRRC42-204ENST00000444987 LOC102724428A0A0B4J2F2 783 aa25.29■■□□□ 1.64
LRRC42-204ENST00000444987 U2AF1L5P0DN76 240 aaPredicted RBP25.29■■□□□ 1.64
LRRC42-204ENST00000444987 SIK1P57059 783 aa25.29■■□□□ 1.64
LRRC42-204ENST00000444987 U2AF1Q01081 240 aaKnown RBP eCLIP25.29■■□□□ 1.64
LRRC42-204ENST00000444987 RSPH6AQ9H0K4 717 aa25.29■■□□□ 1.64
LRRC42-204ENST00000444987 ATG3Q9NT62 314 aa25.29■■□□□ 1.64
LRRC42-204ENST00000444987 ASAP1Q9ULH1 1129 aa25.29■■□□□ 1.64
LRRC42-204ENST00000444987 MRC1P22897 1456 aa25.28■■□□□ 1.64
LRRC42-204ENST00000444987 KCNQ4P56696 695 aa25.28■■□□□ 1.64
LRRC42-204ENST00000444987 SLC16A10Q8TF71 515 aa25.27■■□□□ 1.64
LRRC42-204ENST00000444987 TFCP2L1Q9NZI6 479 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms