RNA–Protein interactions for RNA: ENST00000444906.1

SLC4A3-208, Transcript of solute carrier family 4 member 3, humanhuman

TSL 5

Gene SLC4A3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-208ENST00000444906 DOT1LQ8TEK3 1739 aa23.66■■□□□ 1.38
SLC4A3-208ENST00000444906 KCNQ2O43526 872 aa23.65■■□□□ 1.38
SLC4A3-208ENST00000444906 R3HDM1Q15032 1099 aaKnown RBP23.65■■□□□ 1.38
SLC4A3-208ENST00000444906 ZCRB1Q8TBF4 217 aaKnown RBP23.64■■□□□ 1.37
SLC4A3-208ENST00000444906 DDX54Q8TDD1 881 aaKnown RBP23.64■■□□□ 1.37
SLC4A3-208ENST00000444906 RAPGEF4Q8WZA2 1011 aa23.64■■□□□ 1.37
SLC4A3-208ENST00000444906 ACSBG1Q96GR2 724 aa23.64■■□□□ 1.37
SLC4A3-208ENST00000444906 KNSTRNQ9Y448 316 aa23.64■■□□□ 1.37
SLC4A3-208ENST00000444906 PKD1L3Q7Z443 1732 aa23.64■■□□□ 1.37
SLC4A3-208ENST00000444906 TNNT2P45379 298 aaPredicted RBP23.63■■□□□ 1.37
SLC4A3-208ENST00000444906 TATP17735 454 aaPredicted RBP23.61■■□□□ 1.37
SLC4A3-208ENST00000444906 NBPF14Q5TI25 921 aa23.61■■□□□ 1.37
SLC4A3-208ENST00000444906 SRCAPQ6ZRS2 3230 aa23.61■■□□□ 1.37
SLC4A3-208ENST00000444906 AMER1Q5JTC6 1135 aaPredicted RBP23.6■■□□□ 1.37
SLC4A3-208ENST00000444906 MORC1Q86VD1 984 aa23.6■■□□□ 1.37
SLC4A3-208ENST00000444906 PROM2Q8N271 834 aa23.59■■□□□ 1.37
SLC4A3-208ENST00000444906 EIF4A2Q14240 407 aaKnown RBP23.57■■□□□ 1.36
SLC4A3-208ENST00000444906 TXNRD1Q16881 649 aa23.57■■□□□ 1.36
SLC4A3-208ENST00000444906 EYA1Q99502 592 aa23.57■■□□□ 1.36
SLC4A3-208ENST00000444906 PER1O15534 1290 aaPredicted RBP23.56■■□□□ 1.36
SLC4A3-208ENST00000444906 PCDH11XQ9BZA7 1347 aa23.56■■□□□ 1.36
SLC4A3-208ENST00000444906 PCDH11YQ9BZA8 1340 aa23.56■■□□□ 1.36
SLC4A3-208ENST00000444906 PAPPAQ13219 1627 aa23.55■■□□□ 1.36
SLC4A3-208ENST00000444906 ANO8Q9HCE9 1232 aaPredicted RBP23.54■■□□□ 1.36
SLC4A3-208ENST00000444906 LY75O60449 1722 aa23.53■■□□□ 1.36
SLC4A3-208ENST00000444906 TOGARAM1Q9Y4F4 1720 aa23.53■■□□□ 1.36
SLC4A3-208ENST00000444906 CASZ1Q86V15 1759 aa23.52■■□□□ 1.36
SLC4A3-208ENST00000444906 PRIM1P49642 420 aaKnown RBP23.52■■□□□ 1.36
SLC4A3-208ENST00000444906 IGSF1Q8N6C5 1336 aa23.52■■□□□ 1.36
SLC4A3-208ENST00000444906 PLEKHG2Q9H7P9 1386 aa23.52■■□□□ 1.36
SLC4A3-208ENST00000444906 NPC1L1Q9UHC9 1359 aa23.51■■□□□ 1.35
SLC4A3-208ENST00000444906 ITGB4P16144 1822 aa23.5■■□□□ 1.35
SLC4A3-208ENST00000444906 CYP27B1O15528 508 aa23.5■■□□□ 1.35
SLC4A3-208ENST00000444906 SYTL4Q96C24 671 aaPredicted RBP23.5■■□□□ 1.35
SLC4A3-208ENST00000444906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.49■■□□□ 1.35
SLC4A3-208ENST00000444906 SPG7Q9UQ90 795 aa23.48■■□□□ 1.35
SLC4A3-208ENST00000444906 STK32BQ9NY57 414 aa23.46■■□□□ 1.35
SLC4A3-208ENST00000444906 CC2D1BQ5T0F9 858 aaKnown RBP23.45■■□□□ 1.34
SLC4A3-208ENST00000444906 NKX1-1Q15270 411 aaPredicted RBP23.44■■□□□ 1.34
SLC4A3-208ENST00000444906 SLC15A2Q16348 729 aa23.44■■□□□ 1.34
SLC4A3-208ENST00000444906 SLC27A3Q5K4L6 730 aa23.44■■□□□ 1.34
SLC4A3-208ENST00000444906 LRRC4BQ9NT99 713 aa23.44■■□□□ 1.34
SLC4A3-208ENST00000444906 QSER1Q2KHR3 1735 aa23.44■■□□□ 1.34
SLC4A3-208ENST00000444906 IL13P35225 146 aa23.42■■□□□ 1.34
SLC4A3-208ENST00000444906 MTHFSP49914 203 aa23.42■■□□□ 1.34
SLC4A3-208ENST00000444906 KDRP35968 1356 aa23.41■■□□□ 1.34
SLC4A3-208ENST00000444906 PHKG2P15735 406 aa23.4■■□□□ 1.34
SLC4A3-208ENST00000444906 IFNL2Q8IZJ0 200 aa23.4■■□□□ 1.34
SLC4A3-208ENST00000444906 TUBGCP6Q96RT7 1819 aa23.4■■□□□ 1.34
SLC4A3-208ENST00000444906 ZNF827Q17R98 1081 aa23.38■■□□□ 1.33
SLC4A3-208ENST00000444906 AEBP1Q8IUX7 1158 aa23.38■■□□□ 1.33
SLC4A3-208ENST00000444906 PDGFDQ9GZP0 370 aaPredicted RBP23.38■■□□□ 1.33
SLC4A3-208ENST00000444906 SPON1Q9HCB6 807 aa23.38■■□□□ 1.33
SLC4A3-208ENST00000444906 C5P01031 1676 aa23.38■■□□□ 1.33
SLC4A3-208ENST00000444906 MPRIPQ6WCQ1 1025 aa23.37■■□□□ 1.33
SLC4A3-208ENST00000444906 TAF1LQ8IZX4 1826 aa23.37■■□□□ 1.33
SLC4A3-208ENST00000444906 PLEKHO1Q53GL0 409 aaPredicted RBP23.36■■□□□ 1.33
SLC4A3-208ENST00000444906 SULT6B1Q6IMI4 303 aa23.36■■□□□ 1.33
SLC4A3-208ENST00000444906 AKT1S1Q96B36 256 aa23.36■■□□□ 1.33
SLC4A3-208ENST00000444906 CCNL1Q9UK58 526 aaPredicted RBP23.36■■□□□ 1.33
SLC4A3-208ENST00000444906 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
SLC4A3-208ENST00000444906 AMOTQ4VCS5 1084 aa23.35■■□□□ 1.33
SLC4A3-208ENST00000444906 PALLDQ8WX93 1383 aa23.35■■□□□ 1.33
SLC4A3-208ENST00000444906 KCNQ4P56696 695 aa23.34■■□□□ 1.33
SLC4A3-208ENST00000444906 CNGB1Q14028 1251 aaPredicted RBP23.33■■□□□ 1.33
SLC4A3-208ENST00000444906 PIGBQ92521 554 aa23.33■■□□□ 1.33
SLC4A3-208ENST00000444906 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
SLC4A3-208ENST00000444906 DIAPH1O60610 1272 aaKnown RBP23.32■■□□□ 1.32
SLC4A3-208ENST00000444906 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
SLC4A3-208ENST00000444906 ZBTB7AO95365 584 aa23.31■■□□□ 1.32
SLC4A3-208ENST00000444906 ZNF530Q6P9A1 599 aaPredicted RBP23.31■■□□□ 1.32
SLC4A3-208ENST00000444906 TMOD3Q9NYL9 352 aa23.31■■□□□ 1.32
SLC4A3-208ENST00000444906 KDM6AO15550 1401 aaPredicted RBP23.31■■□□□ 1.32
SLC4A3-208ENST00000444906 SCN11AQ9UI33 1791 aa23.29■■□□□ 1.32
SLC4A3-208ENST00000444906 COL24A1Q17RW2 1714 aa23.29■■□□□ 1.32
SLC4A3-208ENST00000444906 DCAF5Q96JK2 942 aa23.29■■□□□ 1.32
SLC4A3-208ENST00000444906 MTFR1LQ9H019 292 aa23.29■■□□□ 1.32
SLC4A3-208ENST00000444906 VIRMAQ69YN4 1812 aaKnown RBP23.29■■□□□ 1.32
SLC4A3-208ENST00000444906 HMGB2P26583 209 aaKnown RBP23.28■■□□□ 1.32
SLC4A3-208ENST00000444906 PNPLA7Q6ZV29 1317 aa23.28■■□□□ 1.32
SLC4A3-208ENST00000444906 C4BP0C0L5 1744 aa23.28■■□□□ 1.32
SLC4A3-208ENST00000444906 ERVV-2B6SEH9 535 aa23.27■■□□□ 1.32
SLC4A3-208ENST00000444906 PTGER2P43116 358 aa23.27■■□□□ 1.32
SLC4A3-208ENST00000444906 PPP1R1BQ9UD71 204 aaPredicted RBP23.27■■□□□ 1.32
SLC4A3-208ENST00000444906 HMOX1P09601 288 aa23.26■■□□□ 1.31
SLC4A3-208ENST00000444906 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
SLC4A3-208ENST00000444906 TFCP2L1Q9NZI6 479 aa23.26■■□□□ 1.31
SLC4A3-208ENST00000444906 ATF5Q9Y2D1 282 aaPredicted RBP23.26■■□□□ 1.31
SLC4A3-208ENST00000444906 ZNF831Q5JPB2 1677 aa23.25■■□□□ 1.31
SLC4A3-208ENST00000444906 SLC16A10Q8TF71 515 aa23.24■■□□□ 1.31
SLC4A3-208ENST00000444906 SGIP1Q9BQI5 828 aa23.24■■□□□ 1.31
SLC4A3-208ENST00000444906 ASAP1Q9ULH1 1129 aa23.24■■□□□ 1.31
SLC4A3-208ENST00000444906 UBR3Q6ZT12 1888 aa23.24■■□□□ 1.31
SLC4A3-208ENST00000444906 LOC102724428A0A0B4J2F2 783 aa23.23■■□□□ 1.31
SLC4A3-208ENST00000444906 SIK1P57059 783 aa23.23■■□□□ 1.31
SLC4A3-208ENST00000444906 ATG3Q9NT62 314 aa23.23■■□□□ 1.31
SLC4A3-208ENST00000444906 ADAMTS7Q9UKP4 1686 aa23.22■■□□□ 1.31
SLC4A3-208ENST00000444906 PPP2R1AP30153 589 aa23.22■■□□□ 1.31
SLC4A3-208ENST00000444906 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
SLC4A3-208ENST00000444906 CFAP53Q96M91 514 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms