RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CRTC2Q53ET0 693 aaPredicted RBP8.72□□□□□ -1.01
HMGB3P6-201ENST00000444896 ITPKCQ96DU7 683 aa8.72□□□□□ -1.01
HMGB3P6-201ENST00000444896 OSBPL3Q9H4L5 887 aa8.72□□□□□ -1.01
HMGB3P6-201ENST00000444896 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.02
HMGB3P6-201ENST00000444896 DKK1O94907 266 aa8.71□□□□□ -1.02
HMGB3P6-201ENST00000444896 ATG7O95352 703 aa8.71□□□□□ -1.02
HMGB3P6-201ENST00000444896 TIMP2P16035 220 aa8.71□□□□□ -1.02
HMGB3P6-201ENST00000444896 MYT1Q01538 1121 aa8.71□□□□□ -1.02
HMGB3P6-201ENST00000444896 RASA1P20936 1047 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 GTF2IP78347 998 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 PTK7Q13308 1070 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 ARXQ96QS3 562 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 ZFAND3Q9H8U3 227 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 KIAA1024Q9UPX6 916 aa8.7□□□□□ -1.02
HMGB3P6-201ENST00000444896 FAM196BA6NMK8 535 aa8.69□□□□□ -1.02
HMGB3P6-201ENST00000444896 ZIC2O95409 532 aaPredicted RBP8.69□□□□□ -1.02
HMGB3P6-201ENST00000444896 CBLBQ13191 982 aa8.69□□□□□ -1.02
HMGB3P6-201ENST00000444896 KDF1Q8NAX2 398 aaPredicted RBP8.69□□□□□ -1.02
HMGB3P6-201ENST00000444896 ACIN1Q9UKV3 1341 aaKnown RBP8.69□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L15C9J2P7 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L10C9JJH3 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L13C9JLJ4 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L12C9JPN9 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L11C9JVI0 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L21D6R901 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L18D6R9N7 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L22D6RA61 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L17D6RBQ6 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L19D6RCP7 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L20D6RJB6 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 MYCP01106 439 aaPredicted RBP8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 USP17L24Q0WX57 530 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 ELOAQ14241 798 aaKnown RBP8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 Q6ZVU0 165 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 DNAAF2Q9NVR5 837 aaKnown RBP8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
HMGB3P6-201ENST00000444896 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
HMGB3P6-201ENST00000444896 LARGE2Q8N3Y3 721 aa8.67□□□□□ -1.02
HMGB3P6-201ENST00000444896 STAU1O95793 577 aaKnown RBP8.66□□□□□ -1.02
HMGB3P6-201ENST00000444896 AVPP01185 164 aa8.66□□□□□ -1.02
HMGB3P6-201ENST00000444896 ATP1A2P50993 1020 aa8.66□□□□□ -1.02
HMGB3P6-201ENST00000444896 SIX5Q8N196 739 aa8.66□□□□□ -1.02
HMGB3P6-201ENST00000444896 RETREG2Q8NC44 543 aa8.66□□□□□ -1.02
HMGB3P6-201ENST00000444896 CCDC102BQ68D86 513 aa8.65□□□□□ -1.02
HMGB3P6-201ENST00000444896 ANKMY2Q8IV38 441 aa8.65□□□□□ -1.02
HMGB3P6-201ENST00000444896 HOMEZQ8IX15 550 aa8.65□□□□□ -1.02
HMGB3P6-201ENST00000444896 ZNF594Q96JF6 807 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P6-201ENST00000444896 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.02
HMGB3P6-201ENST00000444896 TMEM229AB2RXF0 380 aa8.64□□□□□ -1.03
HMGB3P6-201ENST00000444896 AXIN1O15169 862 aa8.64□□□□□ -1.03
HMGB3P6-201ENST00000444896 ADH1AP07327 375 aa8.64□□□□□ -1.03
HMGB3P6-201ENST00000444896 SCNN1DP51172 638 aa8.64□□□□□ -1.03
HMGB3P6-201ENST00000444896 DPYDQ12882 1025 aa8.64□□□□□ -1.03
HMGB3P6-201ENST00000444896 STK32AQ8WU08 396 aa8.64□□□□□ -1.03
HMGB3P6-201ENST00000444896 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
HMGB3P6-201ENST00000444896 CARNS1A5YM72 827 aa8.63□□□□□ -1.03
HMGB3P6-201ENST00000444896 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
HMGB3P6-201ENST00000444896 CTC1Q2NKJ3 1217 aa8.63□□□□□ -1.03
HMGB3P6-201ENST00000444896 CYP2U1Q7Z449 544 aa8.63□□□□□ -1.03
HMGB3P6-201ENST00000444896 TPCN2Q8NHX9 752 aa8.63□□□□□ -1.03
HMGB3P6-201ENST00000444896 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
HMGB3P6-201ENST00000444896 ESF1Q9H501 851 aaKnown RBP8.63□□□□□ -1.03
HMGB3P6-201ENST00000444896 SFI1A8K8P3 1242 aa8.62□□□□□ -1.03
HMGB3P6-201ENST00000444896 CAPN5O15484 640 aaPredicted RBP8.62□□□□□ -1.03
HMGB3P6-201ENST00000444896 GNRH1P01148 92 aa8.62□□□□□ -1.03
HMGB3P6-201ENST00000444896 FAM69CQ0P6D2 419 aa8.62□□□□□ -1.03
HMGB3P6-201ENST00000444896 TMEM164Q5U3C3 297 aa8.62□□□□□ -1.03
HMGB3P6-201ENST00000444896 MEIOBQ8N635 442 aa8.62□□□□□ -1.03
HMGB3P6-201ENST00000444896 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMGB3P6-201ENST00000444896 ETNK1Q9HBU6 452 aa8.62□□□□□ -1.03
HMGB3P6-201ENST00000444896 PTGIRP43119 386 aa8.61□□□□□ -1.03
HMGB3P6-201ENST00000444896 GDF10P55107 478 aa8.61□□□□□ -1.03
HMGB3P6-201ENST00000444896 PSME1Q06323 249 aa8.61□□□□□ -1.03
HMGB3P6-201ENST00000444896 FAM200AQ8TCP9 573 aa8.61□□□□□ -1.03
HMGB3P6-201ENST00000444896 ZNF358Q9NW07 568 aa8.61□□□□□ -1.03
HMGB3P6-201ENST00000444896 WASLO00401 505 aaPredicted RBP8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 IL2RAP01589 272 aa8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 INHAP05111 366 aa8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 XAGE2Q96GT9 111 aa8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 RAB6BQ9NRW1 208 aa8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 SLAIN2Q9P270 581 aa8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 HRH3Q9Y5N1 445 aa8.6□□□□□ -1.03
HMGB3P6-201ENST00000444896 A0A1W2PRU2 124 aa8.59□□□□□ -1.03
HMGB3P6-201ENST00000444896 ST8SIA5O15466 376 aa8.59□□□□□ -1.03
HMGB3P6-201ENST00000444896 SEC13P55735 322 aa8.59□□□□□ -1.03
HMGB3P6-201ENST00000444896 RELBQ01201 579 aa8.59□□□□□ -1.03
HMGB3P6-201ENST00000444896 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
HMGB3P6-201ENST00000444896 UPP2O95045 317 aa8.58□□□□□ -1.04
HMGB3P6-201ENST00000444896 USTQ9Y2C2 406 aa8.58□□□□□ -1.04
HMGB3P6-201ENST00000444896 M0R2N6 131 aa8.57□□□□□ -1.04
HMGB3P6-201ENST00000444896 CRIPAKQ8N1N5 446 aa8.57□□□□□ -1.04
HMGB3P6-201ENST00000444896 SLC4A9Q96Q91 983 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms