RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 FLT4P35916 1363 aa19.29■□□□□ 0.68
TREX1-202ENST00000444177 KIF24Q5T7B8 1368 aa19.29■□□□□ 0.68
TREX1-202ENST00000444177 RGPD2P0DJD1 1756 aa19.29■□□□□ 0.68
TREX1-202ENST00000444177 SMG6Q86US8 1419 aaKnown RBP19.28■□□□□ 0.68
TREX1-202ENST00000444177 ZBTB7AO95365 584 aa19.28■□□□□ 0.68
TREX1-202ENST00000444177 SYTL4Q96C24 671 aaPredicted RBP19.28■□□□□ 0.68
TREX1-202ENST00000444177 LRRC4BQ9NT99 713 aa19.28■□□□□ 0.68
TREX1-202ENST00000444177 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
TREX1-202ENST00000444177 MEGF6O75095 1541 aa19.28■□□□□ 0.68
TREX1-202ENST00000444177 ANKRD26Q9UPS8 1709 aa19.28■□□□□ 0.68
TREX1-202ENST00000444177 TATP17735 454 aaPredicted RBP19.27■□□□□ 0.68
TREX1-202ENST00000444177 PANK3Q9H999 370 aa19.27■□□□□ 0.68
TREX1-202ENST00000444177 ATF5Q9Y2D1 282 aaPredicted RBP19.27■□□□□ 0.68
TREX1-202ENST00000444177 BTAF1O14981 1849 aa19.26■□□□□ 0.67
TREX1-202ENST00000444177 PPM1GO15355 546 aaPredicted RBP19.26■□□□□ 0.67
TREX1-202ENST00000444177 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
TREX1-202ENST00000444177 PTGER2P43116 358 aa19.24■□□□□ 0.67
TREX1-202ENST00000444177 SLC27A3Q5K4L6 730 aa19.24■□□□□ 0.67
TREX1-202ENST00000444177 CASZ1Q86V15 1759 aa19.24■□□□□ 0.67
TREX1-202ENST00000444177 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
TREX1-202ENST00000444177 ZNF827Q17R98 1081 aa19.22■□□□□ 0.67
TREX1-202ENST00000444177 MTFR1LQ9H019 292 aa19.22■□□□□ 0.67
TREX1-202ENST00000444177 POLKQ9UBT6 870 aa19.22■□□□□ 0.67
TREX1-202ENST00000444177 AKT1S1Q96B36 256 aa19.21■□□□□ 0.67
TREX1-202ENST00000444177 NSD2O96028 1365 aa19.2■□□□□ 0.66
TREX1-202ENST00000444177 KCNQ4P56696 695 aa19.2■□□□□ 0.66
TREX1-202ENST00000444177 CYP27B1O15528 508 aa19.19■□□□□ 0.66
TREX1-202ENST00000444177 TNNT2P45379 298 aaPredicted RBP19.19■□□□□ 0.66
TREX1-202ENST00000444177 EYA1Q99502 592 aa19.19■□□□□ 0.66
TREX1-202ENST00000444177 SHANK3Q9BYB0 1731 aa19.19■□□□□ 0.66
TREX1-202ENST00000444177 PCDH11XQ9BZA7 1347 aa19.19■□□□□ 0.66
TREX1-202ENST00000444177 PCDH11YQ9BZA8 1340 aa19.19■□□□□ 0.66
TREX1-202ENST00000444177 SGIP1Q9BQI5 828 aa19.18■□□□□ 0.66
TREX1-202ENST00000444177 PAPPAQ13219 1627 aa19.18■□□□□ 0.66
TREX1-202ENST00000444177 KNSTRNQ9Y448 316 aa19.17■□□□□ 0.66
TREX1-202ENST00000444177 MAP2P11137 1827 aaKnown RBP19.16■□□□□ 0.66
TREX1-202ENST00000444177 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
TREX1-202ENST00000444177 CCNL1Q9UK58 526 aaPredicted RBP19.16■□□□□ 0.66
TREX1-202ENST00000444177 DOT1LQ8TEK3 1739 aa19.16■□□□□ 0.66
TREX1-202ENST00000444177 TFCP2L1Q9NZI6 479 aa19.15■□□□□ 0.66
TREX1-202ENST00000444177 MPRIPQ6WCQ1 1025 aa19.14■□□□□ 0.65
TREX1-202ENST00000444177 SLC16A10Q8TF71 515 aa19.14■□□□□ 0.65
TREX1-202ENST00000444177 SPG7Q9UQ90 795 aa19.14■□□□□ 0.65
TREX1-202ENST00000444177 NCAPD2Q15021 1401 aa19.14■□□□□ 0.65
TREX1-202ENST00000444177 EIF4A2Q14240 407 aaKnown RBP19.13■□□□□ 0.65
TREX1-202ENST00000444177 NKX1-1Q15270 411 aaPredicted RBP19.13■□□□□ 0.65
TREX1-202ENST00000444177 ARXQ96QS3 562 aa19.13■□□□□ 0.65
TREX1-202ENST00000444177 SYT17Q9BSW7 474 aa19.13■□□□□ 0.65
TREX1-202ENST00000444177 FHDC1Q9C0D6 1143 aaPredicted RBP19.13■□□□□ 0.65
TREX1-202ENST00000444177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.65
TREX1-202ENST00000444177 PNPLA7Q6ZV29 1317 aa19.13■□□□□ 0.65
TREX1-202ENST00000444177 MORC1Q86VD1 984 aa19.12■□□□□ 0.65
TREX1-202ENST00000444177 ZEB1P37275 1124 aaPredicted RBP19.1■□□□□ 0.65
TREX1-202ENST00000444177 PIGBQ92521 554 aa19.1■□□□□ 0.65
TREX1-202ENST00000444177 LY75O60449 1722 aa19.1■□□□□ 0.65
TREX1-202ENST00000444177 AMER1Q5JTC6 1135 aaPredicted RBP19.09■□□□□ 0.65
TREX1-202ENST00000444177 YY1P25490 414 aa19.08■□□□□ 0.64
TREX1-202ENST00000444177 SMARCC1Q92922 1105 aaPredicted RBP19.08■□□□□ 0.64
TREX1-202ENST00000444177 PALLDQ8WX93 1383 aa19.07■□□□□ 0.64
TREX1-202ENST00000444177 PHKG2P15735 406 aa19.07■□□□□ 0.64
TREX1-202ENST00000444177 HMGB2P26583 209 aaKnown RBP19.07■□□□□ 0.64
TREX1-202ENST00000444177 COL23A1Q86Y22 540 aaPredicted RBP19.07■□□□□ 0.64
TREX1-202ENST00000444177 IFNL2Q8IZJ0 200 aa19.07■□□□□ 0.64
TREX1-202ENST00000444177 PKD1L3Q7Z443 1732 aa19.06■□□□□ 0.64
TREX1-202ENST00000444177 POLD1P28340 1107 aa19.06■□□□□ 0.64
TREX1-202ENST00000444177 IGSF1Q8N6C5 1336 aa19.05■□□□□ 0.64
TREX1-202ENST00000444177 MSH5O43196 834 aa19.05■□□□□ 0.64
TREX1-202ENST00000444177 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
TREX1-202ENST00000444177 PER1O15534 1290 aaPredicted RBP19.04■□□□□ 0.64
TREX1-202ENST00000444177 CNGB1Q14028 1251 aaPredicted RBP19.04■□□□□ 0.64
TREX1-202ENST00000444177 QSER1Q2KHR3 1735 aa19.04■□□□□ 0.64
TREX1-202ENST00000444177 TMOD3Q9NYL9 352 aa19.03■□□□□ 0.64
TREX1-202ENST00000444177 MAP3K5Q99683 1374 aa19.03■□□□□ 0.64
TREX1-202ENST00000444177 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
TREX1-202ENST00000444177 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.64
TREX1-202ENST00000444177 ASAP1Q9ULH1 1129 aa19.02■□□□□ 0.64
TREX1-202ENST00000444177 TOGARAM1Q9Y4F4 1720 aa19.02■□□□□ 0.63
TREX1-202ENST00000444177 ITGB4P16144 1822 aa19.02■□□□□ 0.63
TREX1-202ENST00000444177 TUBGCP6Q96RT7 1819 aa19.01■□□□□ 0.63
TREX1-202ENST00000444177 PLEKHG2Q9H7P9 1386 aa19.01■□□□□ 0.63
TREX1-202ENST00000444177 LOC102724428A0A0B4J2F2 783 aa19■□□□□ 0.63
TREX1-202ENST00000444177 SIK1P57059 783 aa19■□□□□ 0.63
TREX1-202ENST00000444177 KLHL34Q8N239 644 aa19■□□□□ 0.63
TREX1-202ENST00000444177 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
TREX1-202ENST00000444177 AMOTQ4VCS5 1084 aa18.99■□□□□ 0.63
TREX1-202ENST00000444177 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
TREX1-202ENST00000444177 ATG3Q9NT62 314 aa18.99■□□□□ 0.63
TREX1-202ENST00000444177 UTRNP46939 3433 aa18.99■□□□□ 0.63
TREX1-202ENST00000444177 ERVV-2B6SEH9 535 aa18.98■□□□□ 0.63
TREX1-202ENST00000444177 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
TREX1-202ENST00000444177 IL13P35225 146 aa18.98■□□□□ 0.63
TREX1-202ENST00000444177 MSL1Q68DK7 614 aa18.98■□□□□ 0.63
TREX1-202ENST00000444177 DCAF5Q96JK2 942 aa18.98■□□□□ 0.63
TREX1-202ENST00000444177 AK7Q96M32 723 aa18.98■□□□□ 0.63
TREX1-202ENST00000444177 COL24A1Q17RW2 1714 aa18.97■□□□□ 0.63
TREX1-202ENST00000444177 SULT6B1Q6IMI4 303 aa18.97■□□□□ 0.63
TREX1-202ENST00000444177 ZNF530Q6P9A1 599 aaPredicted RBP18.97■□□□□ 0.63
TREX1-202ENST00000444177 AMIGO3Q86WK7 504 aa18.97■□□□□ 0.63
TREX1-202ENST00000444177 C5P01031 1676 aa18.97■□□□□ 0.63
TREX1-202ENST00000444177 ATP6V1AP38606 617 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms