RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 DOT1LQ8TEK3 1739 aa14.52□□□□□ -0.09
COMMD1-203ENST00000444166 CCNL1Q9UK58 526 aaPredicted RBP14.5□□□□□ -0.09
COMMD1-203ENST00000444166 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
COMMD1-203ENST00000444166 MSL1Q68DK7 614 aa14.49□□□□□ -0.09
COMMD1-203ENST00000444166 SYTL4Q96C24 671 aaPredicted RBP14.49□□□□□ -0.09
COMMD1-203ENST00000444166 IP6K1Q92551 441 aa14.48□□□□□ -0.09
COMMD1-203ENST00000444166 KIF3CO14782 793 aa14.47□□□□□ -0.09
COMMD1-203ENST00000444166 ZNF526Q8TF50 670 aaPredicted RBP14.47□□□□□ -0.09
COMMD1-203ENST00000444166 L3MBTL2Q969R5 705 aa14.47□□□□□ -0.09
COMMD1-203ENST00000444166 EDC4Q6P2E9 1401 aaKnown RBP14.47□□□□□ -0.09
COMMD1-203ENST00000444166 MSH5O43196 834 aa14.46□□□□□ -0.09
COMMD1-203ENST00000444166 MEGF6O75095 1541 aa14.46□□□□□ -0.1
COMMD1-203ENST00000444166 C5P01031 1676 aa14.45□□□□□ -0.1
COMMD1-203ENST00000444166 ROCK2O75116 1388 aaKnown RBP14.45□□□□□ -0.1
COMMD1-203ENST00000444166 USP47Q96K76 1375 aa14.45□□□□□ -0.1
COMMD1-203ENST00000444166 DNAJC5GQ8N7S2 189 aa14.44□□□□□ -0.1
COMMD1-203ENST00000444166 ZCRB1Q8TBF4 217 aaKnown RBP14.44□□□□□ -0.1
COMMD1-203ENST00000444166 FLAD1Q8NFF5 587 aa14.43□□□□□ -0.1
COMMD1-203ENST00000444166 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
COMMD1-203ENST00000444166 CICQ96RK0 1608 aaPredicted RBP14.43□□□□□ -0.1
COMMD1-203ENST00000444166 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
COMMD1-203ENST00000444166 IGSF1Q8N6C5 1336 aa14.42□□□□□ -0.1
COMMD1-203ENST00000444166 APLP1P51693 650 aa14.42□□□□□ -0.1
COMMD1-203ENST00000444166 SLC12A5Q9H2X9 1139 aa14.42□□□□□ -0.1
COMMD1-203ENST00000444166 A0A1W2PP64 1363 aa14.42□□□□□ -0.1
COMMD1-203ENST00000444166 RGPD2P0DJD1 1756 aa14.42□□□□□ -0.1
COMMD1-203ENST00000444166 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
COMMD1-203ENST00000444166 TOGARAM1Q9Y4F4 1720 aa14.41□□□□□ -0.1
COMMD1-203ENST00000444166 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
COMMD1-203ENST00000444166 AMIGO3Q86WK7 504 aa14.41□□□□□ -0.1
COMMD1-203ENST00000444166 HOXC9P31274 260 aa14.4□□□□□ -0.1
COMMD1-203ENST00000444166 PALLDQ8WX93 1383 aa14.39□□□□□ -0.11
COMMD1-203ENST00000444166 CGNL1Q0VF96 1302 aa14.39□□□□□ -0.11
COMMD1-203ENST00000444166 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
COMMD1-203ENST00000444166 UBR3Q6ZT12 1888 aa14.38□□□□□ -0.11
COMMD1-203ENST00000444166 HMGB2P26583 209 aaKnown RBP14.38□□□□□ -0.11
COMMD1-203ENST00000444166 TMC1Q8TDI8 760 aa14.38□□□□□ -0.11
COMMD1-203ENST00000444166 TERF2IPQ9NYB0 399 aa14.38□□□□□ -0.11
COMMD1-203ENST00000444166 WWC3Q9ULE0 1092 aa14.38□□□□□ -0.11
COMMD1-203ENST00000444166 TOMM70O94826 608 aa14.37□□□□□ -0.11
COMMD1-203ENST00000444166 NBPF6Q5VWK0 638 aa14.37□□□□□ -0.11
COMMD1-203ENST00000444166 NBPF4Q96M43 638 aa14.37□□□□□ -0.11
COMMD1-203ENST00000444166 FBLN1P23142 703 aa14.36□□□□□ -0.11
COMMD1-203ENST00000444166 RTL1A6NKG5 1358 aa14.35□□□□□ -0.11
COMMD1-203ENST00000444166 AMPHP49418 695 aa14.35□□□□□ -0.11
COMMD1-203ENST00000444166 PUS7Q96PZ0 661 aaKnown RBP14.35□□□□□ -0.11
COMMD1-203ENST00000444166 PCNTO95613 3336 aa14.35□□□□□ -0.11
COMMD1-203ENST00000444166 NSD3Q9BZ95 1437 aa14.34□□□□□ -0.11
COMMD1-203ENST00000444166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.34□□□□□ -0.11
COMMD1-203ENST00000444166 SMIM5Q71RC9 77 aa14.34□□□□□ -0.11
COMMD1-203ENST00000444166 AK7Q96M32 723 aa14.34□□□□□ -0.11
COMMD1-203ENST00000444166 PXDNLA1KZ92 1463 aa14.33□□□□□ -0.12
COMMD1-203ENST00000444166 KIAA1551Q9HCM1 1747 aa14.33□□□□□ -0.12
COMMD1-203ENST00000444166 USHBP1Q8N6Y0 703 aa14.33□□□□□ -0.12
COMMD1-203ENST00000444166 COG3Q96JB2 828 aa14.33□□□□□ -0.12
COMMD1-203ENST00000444166 MAP2P11137 1827 aaKnown RBP14.33□□□□□ -0.12
COMMD1-203ENST00000444166 PCDH11XQ9BZA7 1347 aa14.33□□□□□ -0.12
COMMD1-203ENST00000444166 PCDH11YQ9BZA8 1340 aa14.33□□□□□ -0.12
COMMD1-203ENST00000444166 WDR90Q96KV7 1748 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 KIF13BQ9NQT8 1826 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 CYP27B1O15528 508 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 PHF14O94880 888 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 SSFA2P28290 1259 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 COL13A1Q5TAT6 717 aaPredicted RBP14.32□□□□□ -0.12
COMMD1-203ENST00000444166 MPRIPQ6WCQ1 1025 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 RAPGEF4Q8WZA2 1011 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 SMARCC1Q92922 1105 aaPredicted RBP14.32□□□□□ -0.12
COMMD1-203ENST00000444166 SIN3AQ96ST3 1273 aa14.32□□□□□ -0.12
COMMD1-203ENST00000444166 ITGB4P16144 1822 aa14.31□□□□□ -0.12
COMMD1-203ENST00000444166 NMRK2Q9NPI5 230 aa14.31□□□□□ -0.12
COMMD1-203ENST00000444166 TATP17735 454 aaPredicted RBP14.3□□□□□ -0.12
COMMD1-203ENST00000444166 LINC00116Q8NCU8 138 aa14.3□□□□□ -0.12
COMMD1-203ENST00000444166 KLRG1Q96E93 195 aa14.3□□□□□ -0.12
COMMD1-203ENST00000444166 RRS1Q15050 365 aaKnown RBP14.29□□□□□ -0.12
COMMD1-203ENST00000444166 RBM46Q8TBY0 533 aaKnown RBP14.29□□□□□ -0.12
COMMD1-203ENST00000444166 PIGBQ92521 554 aa14.29□□□□□ -0.12
COMMD1-203ENST00000444166 CARD11Q9BXL7 1154 aa14.29□□□□□ -0.12
COMMD1-203ENST00000444166 LOC102724428A0A0B4J2F2 783 aa14.28□□□□□ -0.12
COMMD1-203ENST00000444166 MMP10P09238 476 aa14.28□□□□□ -0.12
COMMD1-203ENST00000444166 SIK1P57059 783 aa14.28□□□□□ -0.12
COMMD1-203ENST00000444166 C10orf71Q711Q0 1435 aa14.28□□□□□ -0.12
COMMD1-203ENST00000444166 PKD1L3Q7Z443 1732 aa14.28□□□□□ -0.12
COMMD1-203ENST00000444166 SMG6Q86US8 1419 aaKnown RBP14.28□□□□□ -0.12
COMMD1-203ENST00000444166 N4BP2Q86UW6 1770 aaPredicted RBP14.27□□□□□ -0.12
COMMD1-203ENST00000444166 INSRP06213 1382 aa14.27□□□□□ -0.12
COMMD1-203ENST00000444166 TGFB2P61812 414 aa14.27□□□□□ -0.13
COMMD1-203ENST00000444166 HTRA3P83110 453 aa14.27□□□□□ -0.13
COMMD1-203ENST00000444166 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
COMMD1-203ENST00000444166 NCAPD2Q15021 1401 aa14.26□□□□□ -0.13
COMMD1-203ENST00000444166 ITPK1Q13572 414 aa14.26□□□□□ -0.13
COMMD1-203ENST00000444166 HSP90AB2PQ58FF8 381 aa14.26□□□□□ -0.13
COMMD1-203ENST00000444166 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
COMMD1-203ENST00000444166 BRCA1P38398 1863 aaKnown RBP14.26□□□□□ -0.13
COMMD1-203ENST00000444166 A0A0G2JLW4 131 aa14.25□□□□□ -0.13
COMMD1-203ENST00000444166 GNPATO15228 680 aa14.25□□□□□ -0.13
COMMD1-203ENST00000444166 FSTL1Q12841 308 aa14.25□□□□□ -0.13
COMMD1-203ENST00000444166 TESK2Q96S53 571 aa14.25□□□□□ -0.13
COMMD1-203ENST00000444166 KIF24Q5T7B8 1368 aa14.24□□□□□ -0.13
COMMD1-203ENST00000444166 FYB1O15117 783 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms