RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 LY75O60449 1722 aa14.07□□□□□ -0.16
HDLBP-221ENST00000444092 TUBGCP6Q96RT7 1819 aa14.06□□□□□ -0.16
HDLBP-221ENST00000444092 RRS1Q15050 365 aaKnown RBP14.06□□□□□ -0.16
HDLBP-221ENST00000444092 GGNBP2Q9H3C7 697 aa14.06□□□□□ -0.16
HDLBP-221ENST00000444092 SMG6Q86US8 1419 aaKnown RBP14.06□□□□□ -0.16
HDLBP-221ENST00000444092 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
HDLBP-221ENST00000444092 SLC16A10Q8TF71 515 aa14.05□□□□□ -0.16
HDLBP-221ENST00000444092 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
HDLBP-221ENST00000444092 TFCP2L1Q9NZI6 479 aa14.05□□□□□ -0.16
HDLBP-221ENST00000444092 RTL1A6NKG5 1358 aa14.05□□□□□ -0.16
HDLBP-221ENST00000444092 USP47Q96K76 1375 aa14.05□□□□□ -0.16
HDLBP-221ENST00000444092 FYB1O15117 783 aa14.04□□□□□ -0.16
HDLBP-221ENST00000444092 POLD1P28340 1107 aa14.04□□□□□ -0.16
HDLBP-221ENST00000444092 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
HDLBP-221ENST00000444092 MEGF6O75095 1541 aa14.04□□□□□ -0.16
HDLBP-221ENST00000444092 KCNQ4P56696 695 aa14.03□□□□□ -0.16
HDLBP-221ENST00000444092 CDCA8Q53HL2 280 aa14.03□□□□□ -0.16
HDLBP-221ENST00000444092 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
HDLBP-221ENST00000444092 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
HDLBP-221ENST00000444092 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
HDLBP-221ENST00000444092 CGNL1Q0VF96 1302 aa14.02□□□□□ -0.17
HDLBP-221ENST00000444092 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.17
HDLBP-221ENST00000444092 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-221ENST00000444092 CCNL1Q9UK58 526 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-221ENST00000444092 COL24A1Q17RW2 1714 aa14.01□□□□□ -0.17
HDLBP-221ENST00000444092 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
HDLBP-221ENST00000444092 TRIM26Q12899 539 aaPredicted RBP14.01□□□□□ -0.17
HDLBP-221ENST00000444092 GPR162Q16538 588 aa14.01□□□□□ -0.17
HDLBP-221ENST00000444092 NSD2O96028 1365 aa14□□□□□ -0.17
HDLBP-221ENST00000444092 MSH5O43196 834 aa14□□□□□ -0.17
HDLBP-221ENST00000444092 HSP90AB2PQ58FF8 381 aa14□□□□□ -0.17
HDLBP-221ENST00000444092 ZNF784Q8NCA9 323 aaPredicted RBP14□□□□□ -0.17
HDLBP-221ENST00000444092 MAP2P11137 1827 aaKnown RBP13.99□□□□□ -0.17
HDLBP-221ENST00000444092 INSRP06213 1382 aa13.99□□□□□ -0.17
HDLBP-221ENST00000444092 FLT4P35916 1363 aa13.99□□□□□ -0.17
HDLBP-221ENST00000444092 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
HDLBP-221ENST00000444092 ITGB4P16144 1822 aa13.99□□□□□ -0.17
HDLBP-221ENST00000444092 C5P01031 1676 aa13.98□□□□□ -0.17
HDLBP-221ENST00000444092 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
HDLBP-221ENST00000444092 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
HDLBP-221ENST00000444092 TAF1LQ8IZX4 1826 aa13.98□□□□□ -0.17
HDLBP-221ENST00000444092 KIF24Q5T7B8 1368 aa13.97□□□□□ -0.17
HDLBP-221ENST00000444092 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
HDLBP-221ENST00000444092 PPM1GO15355 546 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-221ENST00000444092 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.17
HDLBP-221ENST00000444092 NSD3Q9BZ95 1437 aa13.96□□□□□ -0.18
HDLBP-221ENST00000444092 COL23A1Q86Y22 540 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-221ENST00000444092 EMILIN1Q9Y6C2 1016 aa13.95□□□□□ -0.18
HDLBP-221ENST00000444092 PKD1L3Q7Z443 1732 aa13.94□□□□□ -0.18
HDLBP-221ENST00000444092 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
HDLBP-221ENST00000444092 TOGARAM1Q9Y4F4 1720 aa13.94□□□□□ -0.18
HDLBP-221ENST00000444092 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
HDLBP-221ENST00000444092 CYP27B1O15528 508 aa13.93□□□□□ -0.18
HDLBP-221ENST00000444092 MSL1Q68DK7 614 aa13.93□□□□□ -0.18
HDLBP-221ENST00000444092 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
HDLBP-221ENST00000444092 NLGN2Q8NFZ4 835 aa13.93□□□□□ -0.18
HDLBP-221ENST00000444092 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
HDLBP-221ENST00000444092 SMARCC1Q92922 1105 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-221ENST00000444092 GOLGB1Q14789 3259 aaKnown RBP13.92□□□□□ -0.18
HDLBP-221ENST00000444092 ANKRD26Q9UPS8 1709 aa13.92□□□□□ -0.18
HDLBP-221ENST00000444092 C4BP0C0L5 1744 aa13.91□□□□□ -0.18
HDLBP-221ENST00000444092 TIMELESSQ9UNS1 1208 aa13.91□□□□□ -0.18
HDLBP-221ENST00000444092 SPG7Q9UQ90 795 aa13.91□□□□□ -0.18
HDLBP-221ENST00000444092 GRIN3BO60391 1043 aa13.9□□□□□ -0.18
HDLBP-221ENST00000444092 AK7Q96M32 723 aa13.9□□□□□ -0.18
HDLBP-221ENST00000444092 UBR3Q6ZT12 1888 aa13.9□□□□□ -0.18
HDLBP-221ENST00000444092 WASHC2AQ641Q2 1341 aa13.9□□□□□ -0.19
HDLBP-221ENST00000444092 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
HDLBP-221ENST00000444092 C1QTNF8P60827 252 aa13.88□□□□□ -0.19
HDLBP-221ENST00000444092 PIGBQ92521 554 aa13.88□□□□□ -0.19
HDLBP-221ENST00000444092 EYA1Q99502 592 aa13.88□□□□□ -0.19
HDLBP-221ENST00000444092 PHF14O94880 888 aa13.87□□□□□ -0.19
HDLBP-221ENST00000444092 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-221ENST00000444092 PCGF6Q9BYE7 350 aa13.87□□□□□ -0.19
HDLBP-221ENST00000444092 TMOD3Q9NYL9 352 aa13.87□□□□□ -0.19
HDLBP-221ENST00000444092 NCAPD2Q15021 1401 aa13.87□□□□□ -0.19
HDLBP-221ENST00000444092 GIGYF1O75420 1035 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-221ENST00000444092 YBX3P16989 372 aaKnown RBP eCLIP13.86□□□□□ -0.192e-12■■■■■ 27.1
HDLBP-221ENST00000444092 TNNT2P45379 298 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-221ENST00000444092 IFNL2Q8IZJ0 200 aa13.86□□□□□ -0.19
HDLBP-221ENST00000444092 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.192e-15■□□□□ 10.1
HDLBP-221ENST00000444092 POLKQ9UBT6 870 aa13.86□□□□□ -0.19
HDLBP-221ENST00000444092 CD2APQ9Y5K6 639 aa13.86□□□□□ -0.19
HDLBP-221ENST00000444092 LOC102724428A0A0B4J2F2 783 aa13.85□□□□□ -0.19
HDLBP-221ENST00000444092 SIK1P57059 783 aa13.85□□□□□ -0.19
HDLBP-221ENST00000444092 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.84□□□□□ -0.19
HDLBP-221ENST00000444092 PHKG2P15735 406 aa13.84□□□□□ -0.19
HDLBP-221ENST00000444092 CLSPNQ9HAW4 1339 aa13.84□□□□□ -0.19
HDLBP-221ENST00000444092 SSFA2P28290 1259 aa13.83□□□□□ -0.2
HDLBP-221ENST00000444092 ATP6V1AP38606 617 aa13.83□□□□□ -0.2
HDLBP-221ENST00000444092 EIF4A2Q14240 407 aaKnown RBP13.83□□□□□ -0.2
HDLBP-221ENST00000444092 SMIM5Q71RC9 77 aa13.83□□□□□ -0.2
HDLBP-221ENST00000444092 ASAP1Q9ULH1 1129 aa13.83□□□□□ -0.2
HDLBP-221ENST00000444092 GNPATO15228 680 aa13.82□□□□□ -0.2
HDLBP-221ENST00000444092 AMIGO3Q86WK7 504 aa13.82□□□□□ -0.2
HDLBP-221ENST00000444092 LINC00116Q8NCU8 138 aa13.82□□□□□ -0.2
HDLBP-221ENST00000444092 EIF4G2P78344 907 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDLBP-221ENST00000444092 ITPK1Q13572 414 aa13.8□□□□□ -0.2
HDLBP-221ENST00000444092 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
HDLBP-221ENST00000444092 WWC3Q9ULE0 1092 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms