RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 MEGF6O75095 1541 aa17.9■□□□□ 0.46
TOM1-208ENST00000443206 RREB1Q92766 1687 aa17.9■□□□□ 0.46
TOM1-208ENST00000443206 RGPD3A6NKT7 1758 aaPredicted RBP17.89■□□□□ 0.45
TOM1-208ENST00000443206 RGPD4Q7Z3J3 1758 aa17.89■□□□□ 0.45
TOM1-208ENST00000443206 R3HDM1Q15032 1099 aaKnown RBP17.89■□□□□ 0.45
TOM1-208ENST00000443206 AMER1Q5JTC6 1135 aaPredicted RBP17.89■□□□□ 0.45
TOM1-208ENST00000443206 NHSQ6T4R5 1651 aa17.88■□□□□ 0.45
TOM1-208ENST00000443206 NUP188Q5SRE5 1749 aa17.87■□□□□ 0.45
TOM1-208ENST00000443206 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
TOM1-208ENST00000443206 EIF4A2Q14240 407 aaKnown RBP17.87■□□□□ 0.45
TOM1-208ENST00000443206 EYA1Q99502 592 aa17.87■□□□□ 0.45
TOM1-208ENST00000443206 SRCAPQ6ZRS2 3230 aa17.87■□□□□ 0.45
TOM1-208ENST00000443206 SHANK3Q9BYB0 1731 aa17.86■□□□□ 0.45
TOM1-208ENST00000443206 BTAF1O14981 1849 aa17.85■□□□□ 0.45
TOM1-208ENST00000443206 SYTL4Q96C24 671 aaPredicted RBP17.85■□□□□ 0.45
TOM1-208ENST00000443206 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
TOM1-208ENST00000443206 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
TOM1-208ENST00000443206 TXNRD1Q16881 649 aa17.84■□□□□ 0.45
TOM1-208ENST00000443206 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
TOM1-208ENST00000443206 PROM2Q8N271 834 aa17.84■□□□□ 0.45
TOM1-208ENST00000443206 SPG7Q9UQ90 795 aa17.84■□□□□ 0.45
TOM1-208ENST00000443206 NCAPD2Q15021 1401 aa17.83■□□□□ 0.45
TOM1-208ENST00000443206 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.44
TOM1-208ENST00000443206 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
TOM1-208ENST00000443206 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.81■□□□□ 0.44
TOM1-208ENST00000443206 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
TOM1-208ENST00000443206 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
TOM1-208ENST00000443206 IGSF1Q8N6C5 1336 aa17.79■□□□□ 0.44
TOM1-208ENST00000443206 PKD1L3Q7Z443 1732 aa17.79■□□□□ 0.44
TOM1-208ENST00000443206 CYP27B1O15528 508 aa17.79■□□□□ 0.44
TOM1-208ENST00000443206 MTHFSP49914 203 aa17.79■□□□□ 0.44
TOM1-208ENST00000443206 STK32BQ9NY57 414 aa17.78■□□□□ 0.44
TOM1-208ENST00000443206 IFNL2Q8IZJ0 200 aa17.76■□□□□ 0.43
TOM1-208ENST00000443206 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
TOM1-208ENST00000443206 PLEKHG2Q9H7P9 1386 aa17.76■□□□□ 0.43
TOM1-208ENST00000443206 IL13P35225 146 aa17.75■□□□□ 0.43
TOM1-208ENST00000443206 NKX1-1Q15270 411 aaPredicted RBP17.75■□□□□ 0.43
TOM1-208ENST00000443206 SLC15A2Q16348 729 aa17.75■□□□□ 0.43
TOM1-208ENST00000443206 PLEKHO1Q53GL0 409 aaPredicted RBP17.75■□□□□ 0.43
TOM1-208ENST00000443206 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
TOM1-208ENST00000443206 LRP5O75197 1615 aa17.75■□□□□ 0.43
TOM1-208ENST00000443206 SULT6B1Q6IMI4 303 aa17.74■□□□□ 0.43
TOM1-208ENST00000443206 MPRIPQ6WCQ1 1025 aa17.74■□□□□ 0.43
TOM1-208ENST00000443206 ITGB4P16144 1822 aa17.74■□□□□ 0.43
TOM1-208ENST00000443206 PHKG2P15735 406 aa17.73■□□□□ 0.43
TOM1-208ENST00000443206 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
TOM1-208ENST00000443206 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
TOM1-208ENST00000443206 LRRC4BQ9NT99 713 aa17.72■□□□□ 0.43
TOM1-208ENST00000443206 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
TOM1-208ENST00000443206 LY75O60449 1722 aa17.71■□□□□ 0.43
TOM1-208ENST00000443206 HSP90AB1P08238 724 aaKnown RBP17.7■□□□□ 0.42
TOM1-208ENST00000443206 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
TOM1-208ENST00000443206 ZNF530Q6P9A1 599 aaPredicted RBP17.7■□□□□ 0.42
TOM1-208ENST00000443206 SMARCC1Q92922 1105 aaPredicted RBP17.7■□□□□ 0.42
TOM1-208ENST00000443206 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
TOM1-208ENST00000443206 CCNL1Q9UK58 526 aaPredicted RBP17.7■□□□□ 0.42
TOM1-208ENST00000443206 TOGARAM1Q9Y4F4 1720 aa17.69■□□□□ 0.42
TOM1-208ENST00000443206 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
TOM1-208ENST00000443206 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
TOM1-208ENST00000443206 KDRP35968 1356 aa17.68■□□□□ 0.42
TOM1-208ENST00000443206 KCNQ4P56696 695 aa17.68■□□□□ 0.42
TOM1-208ENST00000443206 PIGBQ92521 554 aa17.68■□□□□ 0.42
TOM1-208ENST00000443206 HMOX1P09601 288 aa17.67■□□□□ 0.42
TOM1-208ENST00000443206 DCAF5Q96JK2 942 aa17.67■□□□□ 0.42
TOM1-208ENST00000443206 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
TOM1-208ENST00000443206 PAPPAQ13219 1627 aa17.67■□□□□ 0.42
TOM1-208ENST00000443206 PALLDQ8WX93 1383 aa17.66■□□□□ 0.42
TOM1-208ENST00000443206 CASZ1Q86V15 1759 aa17.66■□□□□ 0.42
TOM1-208ENST00000443206 ERVV-2B6SEH9 535 aa17.66■□□□□ 0.42
TOM1-208ENST00000443206 PDGFDQ9GZP0 370 aaPredicted RBP17.66■□□□□ 0.42
TOM1-208ENST00000443206 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
TOM1-208ENST00000443206 ZNF827Q17R98 1081 aa17.65■□□□□ 0.42
TOM1-208ENST00000443206 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
TOM1-208ENST00000443206 TFCP2L1Q9NZI6 479 aa17.65■□□□□ 0.42
TOM1-208ENST00000443206 PPP1R1BQ9UD71 204 aaPredicted RBP17.65■□□□□ 0.42
TOM1-208ENST00000443206 ZBTB7AO95365 584 aa17.64■□□□□ 0.41
TOM1-208ENST00000443206 PPP2R1AP30153 589 aa17.63■□□□□ 0.41
TOM1-208ENST00000443206 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
TOM1-208ENST00000443206 CABP4P57796 275 aa17.62■□□□□ 0.41
TOM1-208ENST00000443206 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
TOM1-208ENST00000443206 MTFR1LQ9H019 292 aa17.62■□□□□ 0.41
TOM1-208ENST00000443206 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
TOM1-208ENST00000443206 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
TOM1-208ENST00000443206 ATF5Q9Y2D1 282 aaPredicted RBP17.62■□□□□ 0.41
TOM1-208ENST00000443206 TAF1LQ8IZX4 1826 aa17.62■□□□□ 0.41
TOM1-208ENST00000443206 QSER1Q2KHR3 1735 aa17.61■□□□□ 0.41
TOM1-208ENST00000443206 COL3A1P02461 1466 aaPredicted RBP17.61■□□□□ 0.41
TOM1-208ENST00000443206 LOC102724428A0A0B4J2F2 783 aa17.6■□□□□ 0.41
TOM1-208ENST00000443206 SIK1P57059 783 aa17.6■□□□□ 0.41
TOM1-208ENST00000443206 SLC16A10Q8TF71 515 aa17.6■□□□□ 0.41
TOM1-208ENST00000443206 ATG3Q9NT62 314 aa17.6■□□□□ 0.41
TOM1-208ENST00000443206 C5P01031 1676 aa17.6■□□□□ 0.41
TOM1-208ENST00000443206 KDM6AO15550 1401 aaPredicted RBP17.59■□□□□ 0.41
TOM1-208ENST00000443206 PNPLA7Q6ZV29 1317 aa17.59■□□□□ 0.41
TOM1-208ENST00000443206 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.41
TOM1-208ENST00000443206 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.41
TOM1-208ENST00000443206 MSH5O43196 834 aa17.58■□□□□ 0.4
TOM1-208ENST00000443206 DDX10Q13206 875 aaKnown RBP17.58■□□□□ 0.4
TOM1-208ENST00000443206 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
TOM1-208ENST00000443206 NFATC2IPQ8NCF5 419 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms