RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 DRC7Q8IY82 874 aa10.59□□□□□ -0.71
CCDC113-202ENST00000443128 TMOD3Q9NYL9 352 aa10.59□□□□□ -0.71
CCDC113-202ENST00000443128 FLT4P35916 1363 aa10.59□□□□□ -0.71
CCDC113-202ENST00000443128 DDX49Q9Y6V7 483 aaKnown RBP10.59□□□□□ -0.71
CCDC113-202ENST00000443128 PRDM15P57071 1507 aaPredicted RBP10.59□□□□□ -0.71
CCDC113-202ENST00000443128 PTPRTO14522 1441 aa10.58□□□□□ -0.72
CCDC113-202ENST00000443128 ABCA9Q8IUA7 1624 aa10.58□□□□□ -0.72
CCDC113-202ENST00000443128 FLIIQ13045 1269 aa10.58□□□□□ -0.72
CCDC113-202ENST00000443128 ATP6V1DQ9Y5K8 247 aa10.58□□□□□ -0.72
CCDC113-202ENST00000443128 TRDNQ13061 729 aa10.58□□□□□ -0.72
CCDC113-202ENST00000443128 CHMP4CQ96CF2 233 aa10.58□□□□□ -0.72
CCDC113-202ENST00000443128 PTPRCP08575 1304 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 MAP4K4O95819 1239 aaPredicted RBP10.57□□□□□ -0.72
CCDC113-202ENST00000443128 NOL10Q9BSC4 688 aaKnown RBP10.57□□□□□ -0.72
CCDC113-202ENST00000443128 CNNM1Q9NRU3 951 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 IFNL2Q8IZJ0 200 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 PHACTR3Q96KR7 559 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 NRDCO43847 1150 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 SYNE3Q6ZMZ3 975 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 DBF4Q9UBU7 674 aaPredicted RBP10.57□□□□□ -0.72
CCDC113-202ENST00000443128 MAGI2Q86UL8 1455 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 PLXNC1O60486 1568 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 EDC4Q6P2E9 1401 aaKnown RBP10.57□□□□□ -0.72
CCDC113-202ENST00000443128 STARD3NLO95772 234 aa10.57□□□□□ -0.72
CCDC113-202ENST00000443128 SF3A1Q15459 793 aaKnown RBP10.57□□□□□ -0.72
CCDC113-202ENST00000443128 MSNP26038 577 aaKnown RBP10.56□□□□□ -0.72
CCDC113-202ENST00000443128 AACSQ86V21 672 aa10.56□□□□□ -0.72
CCDC113-202ENST00000443128 MAP3K19Q56UN5 1328 aa10.56□□□□□ -0.72
CCDC113-202ENST00000443128 MTHFSDQ2M296 383 aaKnown RBP10.56□□□□□ -0.72
CCDC113-202ENST00000443128 CCDC57Q2TAC2 916 aa10.56□□□□□ -0.72
CCDC113-202ENST00000443128 MCTP1Q6DN14 999 aa10.56□□□□□ -0.72
CCDC113-202ENST00000443128 LARP1Q6PKG0 1096 aaKnown RBP10.56□□□□□ -0.72
CCDC113-202ENST00000443128 DNAAF4Q8WXU2 420 aa10.56□□□□□ -0.72
CCDC113-202ENST00000443128 CPLX2Q6PUV4 134 aaKnown RBP10.56□□□□□ -0.72
CCDC113-202ENST00000443128 CABLES1Q8TDN4 633 aa10.56□□□□□ -0.72
CCDC113-202ENST00000443128 LRRC59Q96AG4 307 aaKnown RBP10.56□□□□□ -0.72
CCDC113-202ENST00000443128 HIP1O00291 1037 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 SMARCA5O60264 1052 aaPredicted RBP10.55□□□□□ -0.72
CCDC113-202ENST00000443128 NEK4P51957 841 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 MYD88Q99836 296 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 SMC3Q9UQE7 1217 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 KDM5CP41229 1560 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 CPLX1O14810 134 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 C8orf58Q8NAV2 365 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 FBXW7Q969H0 707 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 AMOTL1Q8IY63 956 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 FMNL2Q96PY5 1086 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 EYA1Q99502 592 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 GCP02774 474 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 AKAP17AQ02040 695 aaKnown RBP10.55□□□□□ -0.72
CCDC113-202ENST00000443128 CCDC158Q5M9N0 1113 aa10.55□□□□□ -0.72
CCDC113-202ENST00000443128 MYOM2P54296 1465 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 NUCB2P80303 420 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 SKOR2Q2VWA4 1001 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-202ENST00000443128 NUTM1Q86Y26 1132 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 HYPKQ9NX55 129 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 LRRFIP2Q9Y608 721 aaKnown RBP10.54□□□□□ -0.72
CCDC113-202ENST00000443128 VPS37CA5D8V6 355 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-202ENST00000443128 PHF14O94880 888 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 RABEP1Q15276 862 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 TTC39AQ5SRH9 613 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 RALYLQ86SE5 291 aaKnown RBP10.54□□□□□ -0.72
CCDC113-202ENST00000443128 CCDC85AQ96PX6 553 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-202ENST00000443128 IGHDP01880 384 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 HOXC9P31274 260 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 TBC1D2BQ9UPU7 963 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 SBNO2Q9Y2G9 1366 aa10.54□□□□□ -0.72
CCDC113-202ENST00000443128 NAP1L5Q96NT1 182 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-202ENST00000443128 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-202ENST00000443128 PSMA5P28066 241 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 KDM5AP29375 1690 aaKnown RBP10.53□□□□□ -0.72
CCDC113-202ENST00000443128 ANXA1P04083 346 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 NFXL1Q6ZNB6 911 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 EFCAB6Q5THR3 1501 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 KIF1BPQ96EK5 621 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 ORAI2Q96SN7 254 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 EXOC5O00471 708 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 GSE1Q14687 1217 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 IQGAP3Q86VI3 1631 aa10.53□□□□□ -0.72
CCDC113-202ENST00000443128 ARHGAP45Q92619 1136 aa10.52□□□□□ -0.72
CCDC113-202ENST00000443128 CCDC34Q96HJ3 373 aa10.52□□□□□ -0.72
CCDC113-202ENST00000443128 ABCC3O15438 1527 aa10.52□□□□□ -0.72
CCDC113-202ENST00000443128 PIK3R4Q99570 1358 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 PI4KAP2A4QPH2 592 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 MX1P20591 662 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 IL13P35225 146 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 AKAP4Q5JQC9 854 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 PI4KAP1Q8N8J0 262 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 RASSF8Q8NHQ8 419 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 MAP3K2Q9Y2U5 619 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 TET3O43151 1660 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 NFKBIBQ15653 356 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 TSPYL6Q8N831 410 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 METP08581 1390 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 CEP126Q9P2H0 1117 aa10.52□□□□□ -0.73
CCDC113-202ENST00000443128 ERVK-7P63135 1459 aa10.51□□□□□ -0.73
CCDC113-202ENST00000443128 MRPL50Q8N5N7 158 aaKnown RBP10.51□□□□□ -0.73
CCDC113-202ENST00000443128 TNNQ9UQP3 1299 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms