RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 SLC16A10Q8TF71 515 aa10.62□□□□□ -0.71
RPSA-202ENST00000443003 NEUROD1Q13562 356 aa10.61□□□□□ -0.71
RPSA-202ENST00000443003 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
RPSA-202ENST00000443003 MSL1Q68DK7 614 aa10.61□□□□□ -0.71
RPSA-202ENST00000443003 HDGFL2Q7Z4V5 671 aaPredicted RBP10.61□□□□□ -0.71
RPSA-202ENST00000443003 SIN3AQ96ST3 1273 aa10.61□□□□□ -0.71
RPSA-202ENST00000443003 TAF1LQ8IZX4 1826 aa10.61□□□□□ -0.71
RPSA-202ENST00000443003 EDC4Q6P2E9 1401 aaKnown RBP10.6□□□□□ -0.71
RPSA-202ENST00000443003 YBX3P16989 372 aaKnown RBP eCLIP10.6□□□□□ -0.71
RPSA-202ENST00000443003 CCNL1Q9UK58 526 aaPredicted RBP10.6□□□□□ -0.71
RPSA-202ENST00000443003 A0A1W2PP64 1363 aa10.6□□□□□ -0.71
RPSA-202ENST00000443003 ANKRD36BQ8N2N9 1353 aa10.6□□□□□ -0.71
RPSA-202ENST00000443003 ATP10DQ9P241 1426 aa10.59□□□□□ -0.71
RPSA-202ENST00000443003 MEGF6O75095 1541 aa10.59□□□□□ -0.71
RPSA-202ENST00000443003 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
RPSA-202ENST00000443003 CCER1Q8TC90 406 aaPredicted RBP10.59□□□□□ -0.71
RPSA-202ENST00000443003 NSD2O96028 1365 aa10.59□□□□□ -0.71
RPSA-202ENST00000443003 GRIN3BO60391 1043 aa10.58□□□□□ -0.72
RPSA-202ENST00000443003 ZNF526Q8TF50 670 aaPredicted RBP10.58□□□□□ -0.72
RPSA-202ENST00000443003 SLC12A5Q9H2X9 1139 aa10.58□□□□□ -0.72
RPSA-202ENST00000443003 USP47Q96K76 1375 aa10.57□□□□□ -0.72
RPSA-202ENST00000443003 IP6K1Q92551 441 aa10.57□□□□□ -0.72
RPSA-202ENST00000443003 WWC3Q9ULE0 1092 aa10.57□□□□□ -0.72
RPSA-202ENST00000443003 GOLGB1Q14789 3259 aaKnown RBP10.57□□□□□ -0.72
RPSA-202ENST00000443003 ITGB4P16144 1822 aa10.56□□□□□ -0.72
RPSA-202ENST00000443003 TONSLQ96HA7 1378 aa10.56□□□□□ -0.72
RPSA-202ENST00000443003 AMPHP49418 695 aa10.56□□□□□ -0.72
RPSA-202ENST00000443003 COL23A1Q86Y22 540 aaPredicted RBP10.56□□□□□ -0.72
RPSA-202ENST00000443003 CARD11Q9BXL7 1154 aa10.56□□□□□ -0.72
RPSA-202ENST00000443003 GPBP1L1Q9HC44 474 aaPredicted RBP10.56□□□□□ -0.72
RPSA-202ENST00000443003 TERF2IPQ9NYB0 399 aa10.56□□□□□ -0.72
RPSA-202ENST00000443003 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
RPSA-202ENST00000443003 FBLN1P23142 703 aa10.55□□□□□ -0.72
RPSA-202ENST00000443003 USHBP1Q8N6Y0 703 aa10.55□□□□□ -0.72
RPSA-202ENST00000443003 ZCRB1Q8TBF4 217 aaKnown RBP10.55□□□□□ -0.72
RPSA-202ENST00000443003 C4BP0C0L5 1744 aa10.55□□□□□ -0.72
RPSA-202ENST00000443003 UBR3Q6ZT12 1888 aa10.55□□□□□ -0.72
RPSA-202ENST00000443003 MAP3K19Q56UN5 1328 aa10.55□□□□□ -0.72
RPSA-202ENST00000443003 KIF20BQ96Q89 1820 aa10.54□□□□□ -0.72
RPSA-202ENST00000443003 HOXC9P31274 260 aa10.54□□□□□ -0.72
RPSA-202ENST00000443003 COG3Q96JB2 828 aa10.54□□□□□ -0.72
RPSA-202ENST00000443003 TIMELESSQ9UNS1 1208 aa10.54□□□□□ -0.72
RPSA-202ENST00000443003 SMG6Q86US8 1419 aaKnown RBP10.53□□□□□ -0.72
RPSA-202ENST00000443003 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
RPSA-202ENST00000443003 PHF14O94880 888 aa10.52□□□□□ -0.73
RPSA-202ENST00000443003 RRS1Q15050 365 aaKnown RBP10.52□□□□□ -0.73
RPSA-202ENST00000443003 ADCY9O60503 1353 aa10.52□□□□□ -0.73
RPSA-202ENST00000443003 PALLDQ8WX93 1383 aa10.52□□□□□ -0.73
RPSA-202ENST00000443003 HSPA6P17066 643 aa10.51□□□□□ -0.73
RPSA-202ENST00000443003 RAPGEF4Q8WZA2 1011 aa10.51□□□□□ -0.73
RPSA-202ENST00000443003 IGSF1Q8N6C5 1336 aa10.51□□□□□ -0.73
RPSA-202ENST00000443003 RTL1A6NKG5 1358 aa10.51□□□□□ -0.73
RPSA-202ENST00000443003 PKD1L3Q7Z443 1732 aa10.5□□□□□ -0.73
RPSA-202ENST00000443003 N4BP2Q86UW6 1770 aaPredicted RBP10.5□□□□□ -0.73
RPSA-202ENST00000443003 TATP17735 454 aaPredicted RBP10.5□□□□□ -0.73
RPSA-202ENST00000443003 NBPF6Q5VWK0 638 aa10.5□□□□□ -0.73
RPSA-202ENST00000443003 MPRIPQ6WCQ1 1025 aa10.5□□□□□ -0.73
RPSA-202ENST00000443003 AK7Q96M32 723 aa10.5□□□□□ -0.73
RPSA-202ENST00000443003 NBPF4Q96M43 638 aa10.5□□□□□ -0.73
RPSA-202ENST00000443003 CD2APQ9Y5K6 639 aa10.5□□□□□ -0.73
RPSA-202ENST00000443003 SMIM5Q71RC9 77 aa10.49□□□□□ -0.73
RPSA-202ENST00000443003 PCDH11XQ9BZA7 1347 aa10.49□□□□□ -0.73
RPSA-202ENST00000443003 PCDH11YQ9BZA8 1340 aa10.49□□□□□ -0.73
RPSA-202ENST00000443003 FLAD1Q8NFF5 587 aa10.48□□□□□ -0.73
RPSA-202ENST00000443003 MAP2P11137 1827 aaKnown RBP10.48□□□□□ -0.73
RPSA-202ENST00000443003 CEP350Q5VT06 3117 aa10.48□□□□□ -0.73
RPSA-202ENST00000443003 AMIGO3Q86WK7 504 aa10.47□□□□□ -0.73
RPSA-202ENST00000443003 GGNBP2Q9H3C7 697 aa10.47□□□□□ -0.73
RPSA-202ENST00000443003 CGNL1Q0VF96 1302 aa10.47□□□□□ -0.73
RPSA-202ENST00000443003 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
RPSA-202ENST00000443003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.46□□□□□ -0.73
RPSA-202ENST00000443003 NSD3Q9BZ95 1437 aa10.46□□□□□ -0.74
RPSA-202ENST00000443003 KIAA1551Q9HCM1 1747 aa10.46□□□□□ -0.74
RPSA-202ENST00000443003 KIF13BQ9NQT8 1826 aa10.46□□□□□ -0.74
RPSA-202ENST00000443003 WDR90Q96KV7 1748 aa10.45□□□□□ -0.74
RPSA-202ENST00000443003 FLT4P35916 1363 aa10.45□□□□□ -0.74
RPSA-202ENST00000443003 HSP90AB2PQ58FF8 381 aa10.45□□□□□ -0.74
RPSA-202ENST00000443003 ST20-MTHFSA0A0A6YYL1 179 aa10.44□□□□□ -0.74
RPSA-202ENST00000443003 KIF3CO14782 793 aa10.44□□□□□ -0.74
RPSA-202ENST00000443003 CYP27B1O15528 508 aa10.44□□□□□ -0.74
RPSA-202ENST00000443003 MAPK8IP2Q13387 824 aaPredicted RBP10.44□□□□□ -0.74
RPSA-202ENST00000443003 SMARCC1Q92922 1105 aaPredicted RBP10.44□□□□□ -0.74
RPSA-202ENST00000443003 PUS7Q96PZ0 661 aaKnown RBP10.44□□□□□ -0.74
RPSA-202ENST00000443003 TESK2Q96S53 571 aa10.44□□□□□ -0.74
RPSA-202ENST00000443003 INSRP06213 1382 aa10.43□□□□□ -0.74
RPSA-202ENST00000443003 BRCA1P38398 1863 aaKnown RBP10.43□□□□□ -0.74
RPSA-202ENST00000443003 GNPATO15228 680 aa10.43□□□□□ -0.74
RPSA-202ENST00000443003 HMGB2P26583 209 aaKnown RBP10.43□□□□□ -0.74
RPSA-202ENST00000443003 SSFA2P28290 1259 aa10.43□□□□□ -0.74
RPSA-202ENST00000443003 LINC00116Q8NCU8 138 aa10.43□□□□□ -0.74
RPSA-202ENST00000443003 ANKRD26Q9UPS8 1709 aa10.43□□□□□ -0.74
RPSA-202ENST00000443003 PXDNLA1KZ92 1463 aa10.42□□□□□ -0.74
RPSA-202ENST00000443003 C4AP0C0L4 1744 aa10.42□□□□□ -0.74
RPSA-202ENST00000443003 FYB1O15117 783 aa10.42□□□□□ -0.74
RPSA-202ENST00000443003 PIGBQ92521 554 aa10.42□□□□□ -0.74
RPSA-202ENST00000443003 COL5A3P25940 1745 aaPredicted RBP10.41□□□□□ -0.74
RPSA-202ENST00000443003 LOC102724428A0A0B4J2F2 783 aa10.41□□□□□ -0.74
RPSA-202ENST00000443003 PPM1GO15355 546 aaPredicted RBP10.41□□□□□ -0.74
RPSA-202ENST00000443003 MMP10P09238 476 aa10.41□□□□□ -0.74
RPSA-202ENST00000443003 ATP6V1AP38606 617 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms