RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TATP17735 454 aaPredicted RBP21.57■■□□□ 1.04
USP39-205ENST00000442708 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
USP39-205ENST00000442708 CFAP53Q96M91 514 aa21.57■■□□□ 1.04
USP39-205ENST00000442708 KDRP35968 1356 aa21.56■■□□□ 1.04
USP39-205ENST00000442708 SBF2Q86WG5 1849 aa21.55■■□□□ 1.04
USP39-205ENST00000442708 HMOX1P09601 288 aa21.54■■□□□ 1.04
USP39-205ENST00000442708 ZCRB1Q8TBF4 217 aaKnown RBP21.54■■□□□ 1.04
USP39-205ENST00000442708 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
USP39-205ENST00000442708 DDX54Q8TDD1 881 aaKnown RBP21.52■■□□□ 1.04
USP39-205ENST00000442708 CYP27B1O15528 508 aa21.5■■□□□ 1.03
USP39-205ENST00000442708 FAM196AQ6ZSG2 479 aa21.5■■□□□ 1.03
USP39-205ENST00000442708 TNS1Q9HBL0 1735 aaKnown RBP21.49■■□□□ 1.03
USP39-205ENST00000442708 BCL9O00512 1426 aa21.48■■□□□ 1.03
USP39-205ENST00000442708 ANP32CO43423 234 aa21.48■■□□□ 1.03
USP39-205ENST00000442708 CCDC184Q52MB2 194 aa21.48■■□□□ 1.03
USP39-205ENST00000442708 PTF1AQ7RTS3 328 aa21.48■■□□□ 1.03
USP39-205ENST00000442708 DOT1LQ8TEK3 1739 aa21.47■■□□□ 1.03
USP39-205ENST00000442708 U2AF1L5P0DN76 240 aaPredicted RBP21.47■■□□□ 1.03
USP39-205ENST00000442708 U2AF1Q01081 240 aaKnown RBP eCLIP21.47■■□□□ 1.03
USP39-205ENST00000442708 RSPH6AQ9H0K4 717 aa21.47■■□□□ 1.03
USP39-205ENST00000442708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.47■■□□□ 1.039e-7■□□□□ 8.5
USP39-205ENST00000442708 SPG7Q9UQ90 795 aa21.47■■□□□ 1.03
USP39-205ENST00000442708 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
USP39-205ENST00000442708 PLEKHG2Q9H7P9 1386 aa21.47■■□□□ 1.03
USP39-205ENST00000442708 TRIM37O94972 964 aa21.46■■□□□ 1.03
USP39-205ENST00000442708 PCDH11XQ9BZA7 1347 aa21.46■■□□□ 1.03
USP39-205ENST00000442708 PCDH11YQ9BZA8 1340 aa21.46■■□□□ 1.03
USP39-205ENST00000442708 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
USP39-205ENST00000442708 NHSQ6T4R5 1651 aa21.44■■□□□ 1.02
USP39-205ENST00000442708 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
USP39-205ENST00000442708 ACSBG1Q96GR2 724 aa21.44■■□□□ 1.02
USP39-205ENST00000442708 KAT6BQ8WYB5 2073 aa21.43■■□□□ 1.02
USP39-205ENST00000442708 KCNQ2O43526 872 aa21.43■■□□□ 1.02
USP39-205ENST00000442708 PHKG2P15735 406 aa21.43■■□□□ 1.02
USP39-205ENST00000442708 PRKAR2BP31323 418 aa21.43■■□□□ 1.02
USP39-205ENST00000442708 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
USP39-205ENST00000442708 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
USP39-205ENST00000442708 NKX1-1Q15270 411 aaPredicted RBP21.41■■□□□ 1.02
USP39-205ENST00000442708 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
USP39-205ENST00000442708 AMOTQ4VCS5 1084 aa21.41■■□□□ 1.02
USP39-205ENST00000442708 ITGB4P16144 1822 aa21.41■■□□□ 1.02
USP39-205ENST00000442708 FCHSD2O94868 740 aa21.4■■□□□ 1.02
USP39-205ENST00000442708 VIRMAQ69YN4 1812 aaKnown RBP21.4■■□□□ 1.02
USP39-205ENST00000442708 BTAF1O14981 1849 aa21.39■■□□□ 1.02
USP39-205ENST00000442708 CCDC125Q86Z20 511 aa21.39■■□□□ 1.01
USP39-205ENST00000442708 IFNL2Q8IZJ0 200 aa21.39■■□□□ 1.01
USP39-205ENST00000442708 DEFB132Q7Z7B7 95 aa21.38■■□□□ 1.01
USP39-205ENST00000442708 PLEKHF1Q96S99 279 aa21.38■■□□□ 1.01
USP39-205ENST00000442708 BCL11BQ9C0K0 894 aaPredicted RBP21.38■■□□□ 1.01
USP39-205ENST00000442708 KDM6AO15550 1401 aaPredicted RBP21.38■■□□□ 1.01
USP39-205ENST00000442708 PRIM1P49642 420 aaKnown RBP21.37■■□□□ 1.01
USP39-205ENST00000442708 SCN11AQ9UI33 1791 aa21.36■■□□□ 1.01
USP39-205ENST00000442708 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
USP39-205ENST00000442708 APBA3O96018 575 aa21.35■■□□□ 1.01
USP39-205ENST00000442708 SRCAPQ6ZRS2 3230 aa21.35■■□□□ 1.01
USP39-205ENST00000442708 ADAMTS7Q9UKP4 1686 aa21.34■■□□□ 1.01
USP39-205ENST00000442708 AKAP4Q5JQC9 854 aa21.34■■□□□ 1.01
USP39-205ENST00000442708 C1orf141Q5JVX7 400 aa21.34■■□□□ 1.01
USP39-205ENST00000442708 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
USP39-205ENST00000442708 DLG5Q8TDM6 1919 aa21.33■■□□□ 1.01
USP39-205ENST00000442708 SF3B2Q13435 895 aaKnown RBP21.33■■□□□ 1.01
USP39-205ENST00000442708 WDR43Q15061 677 aaKnown RBP eCLIP21.33■■□□□ 1.01
USP39-205ENST00000442708 MPRIPQ6WCQ1 1025 aa21.33■■□□□ 1.01
USP39-205ENST00000442708 SYTL4Q96C24 671 aaPredicted RBP21.33■■□□□ 1.01
USP39-205ENST00000442708 MRS2Q9HD23 443 aa21.33■■□□□ 1.01
USP39-205ENST00000442708 EN1Q05925 392 aaPredicted RBP21.32■■□□□ 1
USP39-205ENST00000442708 DCAF5Q96JK2 942 aa21.32■■□□□ 1
USP39-205ENST00000442708 LGR6Q9HBX8 967 aa21.32■■□□□ 1
USP39-205ENST00000442708 CCDC146Q8IYE0 955 aa21.31■■□□□ 1
USP39-205ENST00000442708 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
USP39-205ENST00000442708 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
USP39-205ENST00000442708 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
USP39-205ENST00000442708 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
USP39-205ENST00000442708 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
USP39-205ENST00000442708 CAMKK2Q96RR4 588 aa21.3■■□□□ 1
USP39-205ENST00000442708 MAP3K5Q99683 1374 aa21.3■■□□□ 1
USP39-205ENST00000442708 BAG6P46379 1132 aa21.29■■□□□ 1
USP39-205ENST00000442708 EZH2Q15910 746 aaKnown RBP21.29■■□□□ 1
USP39-205ENST00000442708 PIGBQ92521 554 aa21.29■■□□□ 1
USP39-205ENST00000442708 RREB1Q92766 1687 aa21.28■■□□□ 1
USP39-205ENST00000442708 RNMTO43148 476 aaKnown RBP21.28■■□□□ 1
USP39-205ENST00000442708 GNAT3A8MTJ3 354 aa21.27■■□□□ 1
USP39-205ENST00000442708 ERVV-2B6SEH9 535 aa21.27■■□□□ 1
USP39-205ENST00000442708 PLSCR1O15162 318 aa21.27■■□□□ 1
USP39-205ENST00000442708 IL17REQ8NFR9 667 aa21.27■■□□□ 1
USP39-205ENST00000442708 LY75O60449 1722 aa21.26■□□□□ 0.99
USP39-205ENST00000442708 MRC1P22897 1456 aa21.26■□□□□ 0.99
USP39-205ENST00000442708 PROM2Q8N271 834 aa21.26■□□□□ 0.99
USP39-205ENST00000442708 PNNQ9H307 717 aaKnown RBP21.26■□□□□ 0.99
USP39-205ENST00000442708 NUP188Q5SRE5 1749 aa21.26■□□□□ 0.99
USP39-205ENST00000442708 SIPA1L3O60292 1781 aaPredicted RBP21.25■□□□□ 0.99
USP39-205ENST00000442708 NFE2L2Q16236 605 aa21.25■□□□□ 0.99
USP39-205ENST00000442708 MIER1Q8N108 512 aa21.25■□□□□ 0.99
USP39-205ENST00000442708 TMOD3Q9NYL9 352 aa21.25■□□□□ 0.99
USP39-205ENST00000442708 MAPK8IP3Q9UPT6 1336 aa21.25■□□□□ 0.99
USP39-205ENST00000442708 NFATC2IPQ8NCF5 419 aa21.24■□□□□ 0.99
USP39-205ENST00000442708 RUNDC1Q96C34 613 aa21.24■□□□□ 0.99
USP39-205ENST00000442708 CABP4P57796 275 aa21.23■□□□□ 0.99
USP39-205ENST00000442708 DCTN1Q14203 1278 aa21.23■□□□□ 0.99
USP39-205ENST00000442708 ASAP1Q9ULH1 1129 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms