RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 TATP17735 454 aaPredicted RBP17.07■□□□□ 0.32
CDCA4P3-201ENST00000442572 ZCRB1Q8TBF4 217 aaKnown RBP17.07■□□□□ 0.32
CDCA4P3-201ENST00000442572 BTAF1O14981 1849 aa17.06■□□□□ 0.32
CDCA4P3-201ENST00000442572 PLSCR1O15162 318 aa17.06■□□□□ 0.32
CDCA4P3-201ENST00000442572 EN1Q05925 392 aaPredicted RBP17.06■□□□□ 0.32
CDCA4P3-201ENST00000442572 NUP188Q5SRE5 1749 aa17.06■□□□□ 0.32
CDCA4P3-201ENST00000442572 DOT1LQ8TEK3 1739 aa17.05■□□□□ 0.32
CDCA4P3-201ENST00000442572 CAMKK2Q96RR4 588 aa17.05■□□□□ 0.32
CDCA4P3-201ENST00000442572 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
CDCA4P3-201ENST00000442572 EYA1Q99502 592 aa17.04■□□□□ 0.32
CDCA4P3-201ENST00000442572 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
CDCA4P3-201ENST00000442572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.03■□□□□ 0.32
CDCA4P3-201ENST00000442572 IGSF1Q8N6C5 1336 aa17.02■□□□□ 0.32
CDCA4P3-201ENST00000442572 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
CDCA4P3-201ENST00000442572 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
CDCA4P3-201ENST00000442572 DDX54Q8TDD1 881 aaKnown RBP17.02■□□□□ 0.32
CDCA4P3-201ENST00000442572 EZH2Q15910 746 aaKnown RBP17.01■□□□□ 0.31
CDCA4P3-201ENST00000442572 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
CDCA4P3-201ENST00000442572 ITGB4P16144 1822 aa17■□□□□ 0.31
CDCA4P3-201ENST00000442572 MTHFSP49914 203 aa16.99■□□□□ 0.31
CDCA4P3-201ENST00000442572 SPG7Q9UQ90 795 aa16.99■□□□□ 0.31
CDCA4P3-201ENST00000442572 LY75O60449 1722 aa16.99■□□□□ 0.31
CDCA4P3-201ENST00000442572 KDRP35968 1356 aa16.97■□□□□ 0.31
CDCA4P3-201ENST00000442572 KCNQ2O43526 872 aa16.96■□□□□ 0.31
CDCA4P3-201ENST00000442572 IL13P35225 146 aa16.96■□□□□ 0.31
CDCA4P3-201ENST00000442572 NBPF14Q5TI25 921 aa16.96■□□□□ 0.31
CDCA4P3-201ENST00000442572 ACSBG1Q96GR2 724 aa16.96■□□□□ 0.31
CDCA4P3-201ENST00000442572 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.3
CDCA4P3-201ENST00000442572 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
CDCA4P3-201ENST00000442572 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
CDCA4P3-201ENST00000442572 CYP27B1O15528 508 aa16.94■□□□□ 0.3
CDCA4P3-201ENST00000442572 AMOTQ4VCS5 1084 aa16.94■□□□□ 0.3
CDCA4P3-201ENST00000442572 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
CDCA4P3-201ENST00000442572 DIAPH1O60610 1272 aaKnown RBP16.93■□□□□ 0.3
CDCA4P3-201ENST00000442572 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
CDCA4P3-201ENST00000442572 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
CDCA4P3-201ENST00000442572 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
CDCA4P3-201ENST00000442572 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
CDCA4P3-201ENST00000442572 PLEKHO1Q53GL0 409 aaPredicted RBP16.92■□□□□ 0.3
CDCA4P3-201ENST00000442572 LRP5O75197 1615 aa16.92■□□□□ 0.3
CDCA4P3-201ENST00000442572 QSER1Q2KHR3 1735 aa16.91■□□□□ 0.3
CDCA4P3-201ENST00000442572 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
CDCA4P3-201ENST00000442572 TXNRD1Q16881 649 aa16.91■□□□□ 0.3
CDCA4P3-201ENST00000442572 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
CDCA4P3-201ENST00000442572 PROM2Q8N271 834 aa16.91■□□□□ 0.3
CDCA4P3-201ENST00000442572 CFAP53Q96M91 514 aa16.91■□□□□ 0.3
CDCA4P3-201ENST00000442572 SCN11AQ9UI33 1791 aa16.9■□□□□ 0.3
CDCA4P3-201ENST00000442572 PAPPAQ13219 1627 aa16.9■□□□□ 0.3
CDCA4P3-201ENST00000442572 PHKG2P15735 406 aa16.9■□□□□ 0.3
CDCA4P3-201ENST00000442572 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
CDCA4P3-201ENST00000442572 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
CDCA4P3-201ENST00000442572 TAF1LQ8IZX4 1826 aa16.89■□□□□ 0.29
CDCA4P3-201ENST00000442572 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
CDCA4P3-201ENST00000442572 R3HDM1Q15032 1099 aaKnown RBP16.88■□□□□ 0.29
CDCA4P3-201ENST00000442572 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
CDCA4P3-201ENST00000442572 CASZ1Q86V15 1759 aa16.87■□□□□ 0.29
CDCA4P3-201ENST00000442572 ZNF831Q5JPB2 1677 aa16.86■□□□□ 0.29
CDCA4P3-201ENST00000442572 PSDA5PKW4 1024 aaPredicted RBP16.86■□□□□ 0.29
CDCA4P3-201ENST00000442572 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
CDCA4P3-201ENST00000442572 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
CDCA4P3-201ENST00000442572 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
CDCA4P3-201ENST00000442572 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
CDCA4P3-201ENST00000442572 C5P01031 1676 aa16.85■□□□□ 0.29
CDCA4P3-201ENST00000442572 ERVV-2B6SEH9 535 aa16.85■□□□□ 0.29
CDCA4P3-201ENST00000442572 C1orf141Q5JVX7 400 aa16.85■□□□□ 0.29
CDCA4P3-201ENST00000442572 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
CDCA4P3-201ENST00000442572 DDX10Q13206 875 aaKnown RBP16.84■□□□□ 0.29
CDCA4P3-201ENST00000442572 RALBP1Q15311 655 aa16.84■□□□□ 0.29
CDCA4P3-201ENST00000442572 MPRIPQ6WCQ1 1025 aa16.84■□□□□ 0.29
CDCA4P3-201ENST00000442572 STK32BQ9NY57 414 aa16.84■□□□□ 0.29
CDCA4P3-201ENST00000442572 ADAMTS7Q9UKP4 1686 aa16.84■□□□□ 0.29
CDCA4P3-201ENST00000442572 TMOD3Q9NYL9 352 aa16.83■□□□□ 0.28
CDCA4P3-201ENST00000442572 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
CDCA4P3-201ENST00000442572 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
CDCA4P3-201ENST00000442572 HMOX1P09601 288 aa16.82■□□□□ 0.28
CDCA4P3-201ENST00000442572 ADRA2BP18089 450 aa16.82■□□□□ 0.28
CDCA4P3-201ENST00000442572 SLC15A2Q16348 729 aa16.82■□□□□ 0.28
CDCA4P3-201ENST00000442572 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
CDCA4P3-201ENST00000442572 PIGBQ92521 554 aa16.82■□□□□ 0.28
CDCA4P3-201ENST00000442572 ANO8Q9HCE9 1232 aaPredicted RBP16.82■□□□□ 0.28
CDCA4P3-201ENST00000442572 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
CDCA4P3-201ENST00000442572 LRRC4BQ9NT99 713 aa16.81■□□□□ 0.28
CDCA4P3-201ENST00000442572 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
CDCA4P3-201ENST00000442572 PIAS4Q8N2W9 510 aaPredicted RBP16.79■□□□□ 0.28
CDCA4P3-201ENST00000442572 CCNL1Q9UK58 526 aaPredicted RBP16.79■□□□□ 0.28
CDCA4P3-201ENST00000442572 FCHSD2O94868 740 aa16.78■□□□□ 0.28
CDCA4P3-201ENST00000442572 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
CDCA4P3-201ENST00000442572 MRC1P22897 1456 aa16.78■□□□□ 0.28
CDCA4P3-201ENST00000442572 CICQ96RK0 1608 aaPredicted RBP16.78■□□□□ 0.28
CDCA4P3-201ENST00000442572 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
CDCA4P3-201ENST00000442572 CABP4P57796 275 aa16.77■□□□□ 0.28
CDCA4P3-201ENST00000442572 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
CDCA4P3-201ENST00000442572 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.27
CDCA4P3-201ENST00000442572 COL24A1Q17RW2 1714 aa16.76■□□□□ 0.27
CDCA4P3-201ENST00000442572 MTHFSDQ2M296 383 aaKnown RBP16.76■□□□□ 0.27
CDCA4P3-201ENST00000442572 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
CDCA4P3-201ENST00000442572 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
CDCA4P3-201ENST00000442572 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
CDCA4P3-201ENST00000442572 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
CDCA4P3-201ENST00000442572 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms