RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CD163L1Q9NR16 1453 aa20■□□□□ 0.79
LINC00642-202ENST00000442515 LTN1O94822 1766 aa19.99■□□□□ 0.79
LINC00642-202ENST00000442515 CD2APQ9Y5K6 639 aa19.99■□□□□ 0.79
LINC00642-202ENST00000442515 ROCK2O75116 1388 aaKnown RBP19.98■□□□□ 0.79
LINC00642-202ENST00000442515 LTV1Q96GA3 475 aaPredicted RBP19.98■□□□□ 0.79
LINC00642-202ENST00000442515 LY75O60449 1722 aa19.98■□□□□ 0.79
LINC00642-202ENST00000442515 DOT1LQ8TEK3 1739 aa19.97■□□□□ 0.79
LINC00642-202ENST00000442515 KAT6BQ8WYB5 2073 aa19.97■□□□□ 0.79
LINC00642-202ENST00000442515 IP6K1Q92551 441 aa19.96■□□□□ 0.79
LINC00642-202ENST00000442515 L3MBTL2Q969R5 705 aa19.96■□□□□ 0.79
LINC00642-202ENST00000442515 USP47Q96K76 1375 aa19.95■□□□□ 0.79
LINC00642-202ENST00000442515 EDC4Q6P2E9 1401 aaKnown RBP19.94■□□□□ 0.78
LINC00642-202ENST00000442515 MEGF6O75095 1541 aa19.94■□□□□ 0.78
LINC00642-202ENST00000442515 ZCRB1Q8TBF4 217 aaKnown RBP19.94■□□□□ 0.78
LINC00642-202ENST00000442515 KIF3CO14782 793 aa19.93■□□□□ 0.78
LINC00642-202ENST00000442515 HDGFL2Q7Z4V5 671 aaPredicted RBP19.93■□□□□ 0.78
LINC00642-202ENST00000442515 TMC1Q8TDI8 760 aa19.92■□□□□ 0.78
LINC00642-202ENST00000442515 WWC3Q9ULE0 1092 aa19.92■□□□□ 0.78
LINC00642-202ENST00000442515 FAM208AQ9UK61 1670 aaKnown RBP19.91■□□□□ 0.78
LINC00642-202ENST00000442515 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
LINC00642-202ENST00000442515 A0A1W2PP64 1363 aa19.91■□□□□ 0.78
LINC00642-202ENST00000442515 FLAD1Q8NFF5 587 aa19.89■□□□□ 0.77
LINC00642-202ENST00000442515 SLC12A5Q9H2X9 1139 aa19.89■□□□□ 0.77
LINC00642-202ENST00000442515 MAP3K19Q56UN5 1328 aa19.88■□□□□ 0.77
LINC00642-202ENST00000442515 HOXC9P31274 260 aa19.88■□□□□ 0.77
LINC00642-202ENST00000442515 APLP1P51693 650 aa19.88■□□□□ 0.77
LINC00642-202ENST00000442515 PALLDQ8WX93 1383 aa19.87■□□□□ 0.77
LINC00642-202ENST00000442515 AMIGO3Q86WK7 504 aa19.86■□□□□ 0.77
LINC00642-202ENST00000442515 C5P01031 1676 aa19.85■□□□□ 0.77
LINC00642-202ENST00000442515 TERF2IPQ9NYB0 399 aa19.85■□□□□ 0.77
LINC00642-202ENST00000442515 PCNTO95613 3336 aa19.84■□□□□ 0.77
LINC00642-202ENST00000442515 AMPHP49418 695 aa19.84■□□□□ 0.77
LINC00642-202ENST00000442515 FBLN1P23142 703 aa19.83■□□□□ 0.77
LINC00642-202ENST00000442515 HMGB2P26583 209 aaKnown RBP19.83■□□□□ 0.77
LINC00642-202ENST00000442515 DNAJC5GQ8N7S2 189 aa19.83■□□□□ 0.77
LINC00642-202ENST00000442515 AK7Q96M32 723 aa19.83■□□□□ 0.77
LINC00642-202ENST00000442515 CGNL1Q0VF96 1302 aa19.82■□□□□ 0.76
LINC00642-202ENST00000442515 PHF14O94880 888 aa19.82■□□□□ 0.76
LINC00642-202ENST00000442515 USHBP1Q8N6Y0 703 aa19.82■□□□□ 0.76
LINC00642-202ENST00000442515 COG3Q96JB2 828 aa19.82■□□□□ 0.76
LINC00642-202ENST00000442515 CICQ96RK0 1608 aaPredicted RBP19.81■□□□□ 0.76
LINC00642-202ENST00000442515 NBPF6Q5VWK0 638 aa19.81■□□□□ 0.76
LINC00642-202ENST00000442515 SMIM5Q71RC9 77 aa19.81■□□□□ 0.76
LINC00642-202ENST00000442515 NBPF4Q96M43 638 aa19.81■□□□□ 0.76
LINC00642-202ENST00000442515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.8■□□□□ 0.76
LINC00642-202ENST00000442515 TOMM70O94826 608 aa19.8■□□□□ 0.76
LINC00642-202ENST00000442515 MPRIPQ6WCQ1 1025 aa19.8■□□□□ 0.76
LINC00642-202ENST00000442515 RAPGEF4Q8WZA2 1011 aa19.8■□□□□ 0.76
LINC00642-202ENST00000442515 SIN3AQ96ST3 1273 aa19.8■□□□□ 0.76
LINC00642-202ENST00000442515 RTL1A6NKG5 1358 aa19.8■□□□□ 0.76
LINC00642-202ENST00000442515 C4BP0C0L5 1744 aa19.79■□□□□ 0.76
LINC00642-202ENST00000442515 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
LINC00642-202ENST00000442515 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
LINC00642-202ENST00000442515 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
LINC00642-202ENST00000442515 NSD3Q9BZ95 1437 aa19.79■□□□□ 0.76
LINC00642-202ENST00000442515 CARD11Q9BXL7 1154 aa19.77■□□□□ 0.76
LINC00642-202ENST00000442515 RGPD2P0DJD1 1756 aa19.76■□□□□ 0.75
LINC00642-202ENST00000442515 TATP17735 454 aaPredicted RBP19.76■□□□□ 0.75
LINC00642-202ENST00000442515 SSFA2P28290 1259 aa19.76■□□□□ 0.75
LINC00642-202ENST00000442515 RRS1Q15050 365 aaKnown RBP19.76■□□□□ 0.75
LINC00642-202ENST00000442515 SMARCC1Q92922 1105 aaPredicted RBP19.76■□□□□ 0.75
LINC00642-202ENST00000442515 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
LINC00642-202ENST00000442515 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
LINC00642-202ENST00000442515 TAF1LQ8IZX4 1826 aa19.74■□□□□ 0.75
LINC00642-202ENST00000442515 NEUROD1Q13562 356 aa19.74■□□□□ 0.75
LINC00642-202ENST00000442515 PUS7Q96PZ0 661 aaKnown RBP19.74■□□□□ 0.75
LINC00642-202ENST00000442515 NMRK2Q9NPI5 230 aa19.74■□□□□ 0.75
LINC00642-202ENST00000442515 CYP27B1O15528 508 aa19.73■□□□□ 0.75
LINC00642-202ENST00000442515 COL13A1Q5TAT6 717 aaPredicted RBP19.73■□□□□ 0.75
LINC00642-202ENST00000442515 LINC00116Q8NCU8 138 aa19.73■□□□□ 0.75
LINC00642-202ENST00000442515 UBR3Q6ZT12 1888 aa19.71■□□□□ 0.75
LINC00642-202ENST00000442515 HTRA3P83110 453 aa19.71■□□□□ 0.75
LINC00642-202ENST00000442515 PIGBQ92521 554 aa19.71■□□□□ 0.75
LINC00642-202ENST00000442515 KLRG1Q96E93 195 aa19.71■□□□□ 0.75
LINC00642-202ENST00000442515 BCS1LQ9Y276 419 aa19.71■□□□□ 0.75
LINC00642-202ENST00000442515 LOC102724428A0A0B4J2F2 783 aa19.7■□□□□ 0.74
LINC00642-202ENST00000442515 CAPN15O75808 1086 aa19.7■□□□□ 0.74
LINC00642-202ENST00000442515 MMP10P09238 476 aa19.7■□□□□ 0.74
LINC00642-202ENST00000442515 SIK1P57059 783 aa19.7■□□□□ 0.74
LINC00642-202ENST00000442515 GNPATO15228 680 aa19.69■□□□□ 0.74
LINC00642-202ENST00000442515 RBM46Q8TBY0 533 aaKnown RBP19.69■□□□□ 0.74
LINC00642-202ENST00000442515 HSP90AB2PQ58FF8 381 aa19.68■□□□□ 0.74
LINC00642-202ENST00000442515 JMYQ8N9B5 988 aa19.68■□□□□ 0.74
LINC00642-202ENST00000442515 INSRP06213 1382 aa19.68■□□□□ 0.74
LINC00642-202ENST00000442515 WDR90Q96KV7 1748 aa19.68■□□□□ 0.74
LINC00642-202ENST00000442515 C10orf71Q711Q0 1435 aa19.68■□□□□ 0.74
LINC00642-202ENST00000442515 TGFB2P61812 414 aa19.67■□□□□ 0.74
LINC00642-202ENST00000442515 ARHGAP27Q6ZUM4 889 aa19.67■□□□□ 0.74
LINC00642-202ENST00000442515 A0A0G2JLW4 131 aa19.66■□□□□ 0.74
LINC00642-202ENST00000442515 ITPK1Q13572 414 aa19.66■□□□□ 0.74
LINC00642-202ENST00000442515 GGNBP2Q9H3C7 697 aa19.66■□□□□ 0.74
LINC00642-202ENST00000442515 FLT4P35916 1363 aa19.65■□□□□ 0.74
LINC00642-202ENST00000442515 KIAA1551Q9HCM1 1747 aa19.65■□□□□ 0.74
LINC00642-202ENST00000442515 FYB1O15117 783 aa19.64■□□□□ 0.73
LINC00642-202ENST00000442515 NKX1-1Q15270 411 aaPredicted RBP19.64■□□□□ 0.73
LINC00642-202ENST00000442515 C16orf71Q8IYS4 520 aaPredicted RBP19.64■□□□□ 0.73
LINC00642-202ENST00000442515 TNS4Q8IZW8 715 aa19.64■□□□□ 0.73
LINC00642-202ENST00000442515 TESK2Q96S53 571 aa19.64■□□□□ 0.73
LINC00642-202ENST00000442515 PLEKHG2Q9H7P9 1386 aa19.64■□□□□ 0.73
LINC00642-202ENST00000442515 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms