RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 SLC16A10Q8TF71 515 aa18.15■□□□□ 0.5
TRIM13-205ENST00000442421 TFCP2L1Q9NZI6 479 aa18.15■□□□□ 0.5
TRIM13-205ENST00000442421 PRIM1P49642 420 aaKnown RBP18.14■□□□□ 0.49
TRIM13-205ENST00000442421 NSD2O96028 1365 aa18.14■□□□□ 0.49
TRIM13-205ENST00000442421 ANKRD36BQ8N2N9 1353 aa18.14■□□□□ 0.49
TRIM13-205ENST00000442421 MEGF6O75095 1541 aa18.13■□□□□ 0.49
TRIM13-205ENST00000442421 FBLN1P23142 703 aa18.13■□□□□ 0.49
TRIM13-205ENST00000442421 MAP3K19Q56UN5 1328 aa18.13■□□□□ 0.49
TRIM13-205ENST00000442421 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
TRIM13-205ENST00000442421 HOXC9P31274 260 aa18.11■□□□□ 0.49
TRIM13-205ENST00000442421 C5P01031 1676 aa18.11■□□□□ 0.49
TRIM13-205ENST00000442421 TAF1LQ8IZX4 1826 aa18.1■□□□□ 0.49
TRIM13-205ENST00000442421 AMPHP49418 695 aa18.1■□□□□ 0.49
TRIM13-205ENST00000442421 COG3Q96JB2 828 aa18.1■□□□□ 0.49
TRIM13-205ENST00000442421 CEP350Q5VT06 3117 aa18.1■□□□□ 0.49
TRIM13-205ENST00000442421 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
TRIM13-205ENST00000442421 PUS7Q96PZ0 661 aaKnown RBP18.09■□□□□ 0.49
TRIM13-205ENST00000442421 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
TRIM13-205ENST00000442421 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
TRIM13-205ENST00000442421 MSH5O43196 834 aa18.07■□□□□ 0.48
TRIM13-205ENST00000442421 GIGYF1O75420 1035 aaPredicted RBP18.07■□□□□ 0.48
TRIM13-205ENST00000442421 TESK2Q96S53 571 aa18.07■□□□□ 0.48
TRIM13-205ENST00000442421 KIF20BQ96Q89 1820 aa18.07■□□□□ 0.48
TRIM13-205ENST00000442421 USHBP1Q8N6Y0 703 aa18.06■□□□□ 0.48
TRIM13-205ENST00000442421 ITGB4P16144 1822 aa18.06■□□□□ 0.48
TRIM13-205ENST00000442421 USP47Q96K76 1375 aa18.05■□□□□ 0.48
TRIM13-205ENST00000442421 ST20-MTHFSA0A0A6YYL1 179 aa18.05■□□□□ 0.48
TRIM13-205ENST00000442421 YBX3P16989 372 aaKnown RBP eCLIP18.05■□□□□ 0.48
TRIM13-205ENST00000442421 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
TRIM13-205ENST00000442421 COL23A1Q86Y22 540 aaPredicted RBP18.05■□□□□ 0.48
TRIM13-205ENST00000442421 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
TRIM13-205ENST00000442421 NBPF6Q5VWK0 638 aa18.04■□□□□ 0.48
TRIM13-205ENST00000442421 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
TRIM13-205ENST00000442421 NBPF4Q96M43 638 aa18.04■□□□□ 0.48
TRIM13-205ENST00000442421 TOGARAM1Q9Y4F4 1720 aa18.03■□□□□ 0.48
TRIM13-205ENST00000442421 SMG6Q86US8 1419 aaKnown RBP18.01■□□□□ 0.47
TRIM13-205ENST00000442421 RAPGEF4Q8WZA2 1011 aa18.01■□□□□ 0.47
TRIM13-205ENST00000442421 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
TRIM13-205ENST00000442421 UBR3Q6ZT12 1888 aa18.01■□□□□ 0.47
TRIM13-205ENST00000442421 C4BP0C0L5 1744 aa18■□□□□ 0.47
TRIM13-205ENST00000442421 CGNL1Q0VF96 1302 aa17.99■□□□□ 0.47
TRIM13-205ENST00000442421 PKD1L3Q7Z443 1732 aa17.99■□□□□ 0.47
TRIM13-205ENST00000442421 FYB1O15117 783 aa17.99■□□□□ 0.47
TRIM13-205ENST00000442421 GRIN3BO60391 1043 aa17.99■□□□□ 0.47
TRIM13-205ENST00000442421 TATP17735 454 aaPredicted RBP17.99■□□□□ 0.47
TRIM13-205ENST00000442421 PALLDQ8WX93 1383 aa17.98■□□□□ 0.47
TRIM13-205ENST00000442421 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
TRIM13-205ENST00000442421 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
TRIM13-205ENST00000442421 HSP90AB2PQ58FF8 381 aa17.97■□□□□ 0.47
TRIM13-205ENST00000442421 ATP10DQ9P241 1426 aa17.97■□□□□ 0.47
TRIM13-205ENST00000442421 INSRP06213 1382 aa17.96■□□□□ 0.47
TRIM13-205ENST00000442421 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
TRIM13-205ENST00000442421 MAP2P11137 1827 aaKnown RBP17.95■□□□□ 0.46
TRIM13-205ENST00000442421 FLT4P35916 1363 aa17.94■□□□□ 0.46
TRIM13-205ENST00000442421 CYP27B1O15528 508 aa17.94■□□□□ 0.46
TRIM13-205ENST00000442421 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
TRIM13-205ENST00000442421 CD2APQ9Y5K6 639 aa17.94■□□□□ 0.46
TRIM13-205ENST00000442421 AMIGO3Q86WK7 504 aa17.93■□□□□ 0.46
TRIM13-205ENST00000442421 FLAD1Q8NFF5 587 aa17.93■□□□□ 0.46
TRIM13-205ENST00000442421 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
TRIM13-205ENST00000442421 SMIM5Q71RC9 77 aa17.92■□□□□ 0.46
TRIM13-205ENST00000442421 AK7Q96M32 723 aa17.92■□□□□ 0.46
TRIM13-205ENST00000442421 PHF14O94880 888 aa17.91■□□□□ 0.46
TRIM13-205ENST00000442421 TMF1P82094 1093 aa17.91■□□□□ 0.46
TRIM13-205ENST00000442421 WWC3Q9ULE0 1092 aa17.91■□□□□ 0.46
TRIM13-205ENST00000442421 ZNF526Q8TF50 670 aaPredicted RBP17.9■□□□□ 0.46
TRIM13-205ENST00000442421 EMILIN1Q9Y6C2 1016 aa17.9■□□□□ 0.46
TRIM13-205ENST00000442421 ADCY9O60503 1353 aa17.9■□□□□ 0.46
TRIM13-205ENST00000442421 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
TRIM13-205ENST00000442421 SMARCC1Q92922 1105 aaPredicted RBP17.89■□□□□ 0.45
TRIM13-205ENST00000442421 GPBP1L1Q9HC44 474 aaPredicted RBP17.89■□□□□ 0.45
TRIM13-205ENST00000442421 PIGBQ92521 554 aa17.88■□□□□ 0.45
TRIM13-205ENST00000442421 IGSF1Q8N6C5 1336 aa17.88■□□□□ 0.45
TRIM13-205ENST00000442421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.87■□□□□ 0.45
TRIM13-205ENST00000442421 HMGB2P26583 209 aaKnown RBP17.87■□□□□ 0.45
TRIM13-205ENST00000442421 NCAPD2Q15021 1401 aa17.87■□□□□ 0.45
TRIM13-205ENST00000442421 IFFO2Q5TF58 517 aa17.86■□□□□ 0.45
TRIM13-205ENST00000442421 LINC00116Q8NCU8 138 aa17.86■□□□□ 0.45
TRIM13-205ENST00000442421 NSD3Q9BZ95 1437 aa17.86■□□□□ 0.45
TRIM13-205ENST00000442421 N4BP2Q86UW6 1770 aaPredicted RBP17.86■□□□□ 0.45
TRIM13-205ENST00000442421 PPM1GO15355 546 aaPredicted RBP17.85■□□□□ 0.45
TRIM13-205ENST00000442421 CARD14Q9BXL6 1004 aa17.85■□□□□ 0.45
TRIM13-205ENST00000442421 KIF13BQ9NQT8 1826 aa17.85■□□□□ 0.45
TRIM13-205ENST00000442421 KIAA1551Q9HCM1 1747 aa17.84■□□□□ 0.45
TRIM13-205ENST00000442421 LOC102724428A0A0B4J2F2 783 aa17.84■□□□□ 0.45
TRIM13-205ENST00000442421 SSFA2P28290 1259 aa17.84■□□□□ 0.45
TRIM13-205ENST00000442421 SIK1P57059 783 aa17.84■□□□□ 0.45
TRIM13-205ENST00000442421 NKX1-1Q15270 411 aaPredicted RBP17.84■□□□□ 0.45
TRIM13-205ENST00000442421 SPG7Q9UQ90 795 aa17.83■□□□□ 0.44
TRIM13-205ENST00000442421 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
TRIM13-205ENST00000442421 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
TRIM13-205ENST00000442421 ASAP1Q9ULH1 1129 aa17.82■□□□□ 0.44
TRIM13-205ENST00000442421 CICQ96RK0 1608 aaPredicted RBP17.82■□□□□ 0.44
TRIM13-205ENST00000442421 GNPATO15228 680 aa17.81■□□□□ 0.44
TRIM13-205ENST00000442421 HSPA6P17066 643 aa17.81■□□□□ 0.44
TRIM13-205ENST00000442421 ITPK1Q13572 414 aa17.81■□□□□ 0.44
TRIM13-205ENST00000442421 EYA1Q99502 592 aa17.8■□□□□ 0.44
TRIM13-205ENST00000442421 COL5A3P25940 1745 aaPredicted RBP17.8■□□□□ 0.44
TRIM13-205ENST00000442421 WASHC2AQ641Q2 1341 aa17.79■□□□□ 0.44
TRIM13-205ENST00000442421 ATP6V1AP38606 617 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms