RNA–Protein interactions for RNA: ENST00000441818.5

TRMU-204, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 1 (best)

Gene TRMU, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-204ENST00000441818 EXOSC9Q06265 439 aaKnown RBP27.55■■■□□ 2
TRMU-204ENST00000441818 LMO7Q8WWI1 1683 aa27.54■■■□□ 2
TRMU-204ENST00000441818 MCM10Q7L590 875 aa27.54■■■□□ 2
TRMU-204ENST00000441818 FAM208AQ9UK61 1670 aaKnown RBP27.54■■■□□ 2
TRMU-204ENST00000441818 GNAT3A8MTJ3 354 aa27.53■■■□□ 2
TRMU-204ENST00000441818 PLIN1O60240 522 aa27.53■■■□□ 2
TRMU-204ENST00000441818 CSB-PGBD3P0DP91 1061 aa27.53■■■□□ 2
TRMU-204ENST00000441818 NLRP2Q9NX02 1062 aa27.53■■■□□ 2
TRMU-204ENST00000441818 RARSP54136 660 aaKnown RBP27.52■■■□□ 2
TRMU-204ENST00000441818 BCAR3O75815 825 aa27.51■■□□□ 1.99
TRMU-204ENST00000441818 AMOTQ4VCS5 1084 aa27.51■■□□□ 1.99
TRMU-204ENST00000441818 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■□□□ 1.99
TRMU-204ENST00000441818 MAP3K5Q99683 1374 aa27.51■■□□□ 1.99
TRMU-204ENST00000441818 MBIPQ9NS73 344 aa27.5■■□□□ 1.99
TRMU-204ENST00000441818 PPP4R2Q9NY27 417 aa27.5■■□□□ 1.99
TRMU-204ENST00000441818 PHLPP1O60346 1717 aa27.48■■□□□ 1.99
TRMU-204ENST00000441818 PIP4K2BP78356 416 aa27.48■■□□□ 1.99
TRMU-204ENST00000441818 CRB1P82279 1406 aa27.48■■□□□ 1.99
TRMU-204ENST00000441818 COL22A1Q8NFW1 1626 aaPredicted RBP27.47■■□□□ 1.99
TRMU-204ENST00000441818 CHL1O00533 1208 aa27.46■■□□□ 1.99
TRMU-204ENST00000441818 RAPGEF4Q8WZA2 1011 aa27.46■■□□□ 1.99
TRMU-204ENST00000441818 UBAP1LF5GYI3 381 aa27.45■■□□□ 1.99
TRMU-204ENST00000441818 COL16A1Q07092 1604 aaPredicted RBP27.45■■□□□ 1.98
TRMU-204ENST00000441818 WDR17Q8IZU2 1322 aa27.44■■□□□ 1.98
TRMU-204ENST00000441818 ZNF530Q6P9A1 599 aaPredicted RBP27.44■■□□□ 1.98
TRMU-204ENST00000441818 ZNF428Q96B54 188 aa27.44■■□□□ 1.98
TRMU-204ENST00000441818 AKAP4Q5JQC9 854 aa27.43■■□□□ 1.98
TRMU-204ENST00000441818 COL5A2P05997 1499 aaPredicted RBP27.43■■□□□ 1.98
TRMU-204ENST00000441818 PLEKHG2Q9H7P9 1386 aa27.43■■□□□ 1.98
TRMU-204ENST00000441818 IL17REQ8NFR9 667 aa27.43■■□□□ 1.98
TRMU-204ENST00000441818 LRRC37A3O60309 1634 aa27.42■■□□□ 1.98
TRMU-204ENST00000441818 TATP17735 454 aaPredicted RBP27.42■■□□□ 1.98
TRMU-204ENST00000441818 CANXP27824 592 aaKnown RBP27.4■■□□□ 1.98
TRMU-204ENST00000441818 C1orf141Q5JVX7 400 aa27.4■■□□□ 1.98
TRMU-204ENST00000441818 EXOC6Q8TAG9 804 aa27.4■■□□□ 1.98
TRMU-204ENST00000441818 C20orf194Q5TEA3 1177 aa27.4■■□□□ 1.98
TRMU-204ENST00000441818 BCL2L13Q9BXK5 485 aa27.4■■□□□ 1.98
TRMU-204ENST00000441818 ALDH1L2Q3SY69 923 aa27.39■■□□□ 1.98
TRMU-204ENST00000441818 TOM1L2Q6ZVM7 507 aa27.39■■□□□ 1.98
TRMU-204ENST00000441818 SMC4Q9NTJ3 1288 aa27.39■■□□□ 1.98
TRMU-204ENST00000441818 CEMIPQ8WUJ3 1361 aa27.38■■□□□ 1.97
TRMU-204ENST00000441818 VAMP4O75379 141 aa27.38■■□□□ 1.97
TRMU-204ENST00000441818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.38■■□□□ 1.972e-7■□□□□ 8.1
TRMU-204ENST00000441818 EVA1CP58658 441 aa27.37■■□□□ 1.97
TRMU-204ENST00000441818 TWISTNBQ3B726 338 aaPredicted RBP27.37■■□□□ 1.97
TRMU-204ENST00000441818 SSH1Q8WYL5 1049 aa27.37■■□□□ 1.97
TRMU-204ENST00000441818 FRAT1Q92837 279 aaPredicted RBP27.37■■□□□ 1.97
TRMU-204ENST00000441818 TSPYL4Q9UJ04 414 aa27.37■■□□□ 1.97
TRMU-204ENST00000441818 PDE3AQ14432 1141 aa27.37■■□□□ 1.97
TRMU-204ENST00000441818 TSPYL6Q8N831 410 aa27.37■■□□□ 1.97
TRMU-204ENST00000441818 CRBNQ96SW2 442 aa27.37■■□□□ 1.97
TRMU-204ENST00000441818 BABAM1Q9NWV8 329 aa27.37■■□□□ 1.97
TRMU-204ENST00000441818 MEGF6O75095 1541 aa27.37■■□□□ 1.97
TRMU-204ENST00000441818 C8orf58Q8NAV2 365 aa27.36■■□□□ 1.97
TRMU-204ENST00000441818 SPG7Q9UQ90 795 aa27.36■■□□□ 1.97
TRMU-204ENST00000441818 COL14A1Q05707 1796 aaKnown RBP27.36■■□□□ 1.97
TRMU-204ENST00000441818 TAF7Q15545 349 aaPredicted RBP27.35■■□□□ 1.97
TRMU-204ENST00000441818 CERKQ8TCT0 537 aa27.35■■□□□ 1.97
TRMU-204ENST00000441818 CARD10Q9BWT7 1032 aa27.35■■□□□ 1.97
TRMU-204ENST00000441818 STRN4Q9NRL3 753 aa27.35■■□□□ 1.97
TRMU-204ENST00000441818 ELL2O00472 640 aaPredicted RBP27.34■■□□□ 1.97
TRMU-204ENST00000441818 MIS18AQ9NYP9 233 aa27.34■■□□□ 1.97
TRMU-204ENST00000441818 LGR6Q9HBX8 967 aa27.32■■□□□ 1.96
TRMU-204ENST00000441818 BTG4Q9NY30 223 aa27.32■■□□□ 1.96
TRMU-204ENST00000441818 OVOS2A0A0G2JMS6 1433 aa27.32■■□□□ 1.96
TRMU-204ENST00000441818 LARP1Q6PKG0 1096 aaKnown RBP27.32■■□□□ 1.96
TRMU-204ENST00000441818 MPRIPQ6WCQ1 1025 aa27.32■■□□□ 1.96
TRMU-204ENST00000441818 BRPF1P55201 1214 aaPredicted RBP27.31■■□□□ 1.96
TRMU-204ENST00000441818 B4GALNT3Q6L9W6 998 aa27.31■■□□□ 1.96
TRMU-204ENST00000441818 RNMTO43148 476 aaKnown RBP27.3■■□□□ 1.96
TRMU-204ENST00000441818 ZKSCAN2Q63HK3 967 aa27.3■■□□□ 1.96
TRMU-204ENST00000441818 KIF16BQ96L93 1317 aa27.3■■□□□ 1.96
TRMU-204ENST00000441818 TEFQ10587 303 aa27.3■■□□□ 1.96
TRMU-204ENST00000441818 PKD1L3Q7Z443 1732 aa27.29■■□□□ 1.96
TRMU-204ENST00000441818 CCDC136Q96JN2 1154 aa27.29■■□□□ 1.96
TRMU-204ENST00000441818 PARP4Q9UKK3 1724 aaKnown RBP27.28■■□□□ 1.96
TRMU-204ENST00000441818 MS4A1P11836 297 aa27.28■■□□□ 1.96
TRMU-204ENST00000441818 IFNL2Q8IZJ0 200 aa27.28■■□□□ 1.96
TRMU-204ENST00000441818 PHKG2P15735 406 aa27.27■■□□□ 1.96
TRMU-204ENST00000441818 KRT24Q2M2I5 525 aa27.27■■□□□ 1.96
TRMU-204ENST00000441818 VIRMAQ69YN4 1812 aaKnown RBP27.27■■□□□ 1.96
TRMU-204ENST00000441818 IPO8O15397 1037 aaKnown RBP27.27■■□□□ 1.96
TRMU-204ENST00000441818 IL2RBP14784 551 aa27.26■■□□□ 1.95
TRMU-204ENST00000441818 PANK1Q8TE04 598 aa27.26■■□□□ 1.95
TRMU-204ENST00000441818 NOB1Q9ULX3 412 aaKnown RBP27.26■■□□□ 1.95
TRMU-204ENST00000441818 ADAMTS7Q9UKP4 1686 aa27.26■■□□□ 1.95
TRMU-204ENST00000441818 MRPL50Q8N5N7 158 aaKnown RBP27.25■■□□□ 1.95
TRMU-204ENST00000441818 ADAMTS2O95450 1211 aa27.24■■□□□ 1.95
TRMU-204ENST00000441818 ATF7IPQ6VMQ6 1270 aa27.24■■□□□ 1.95
TRMU-204ENST00000441818 CYP27B1O15528 508 aa27.22■■□□□ 1.95
TRMU-204ENST00000441818 HSP90AB1P08238 724 aaKnown RBP27.22■■□□□ 1.95
TRMU-204ENST00000441818 DZIP1LQ8IYY4 767 aaKnown RBP27.22■■□□□ 1.95
TRMU-204ENST00000441818 ZCRB1Q8TBF4 217 aaKnown RBP27.22■■□□□ 1.95
TRMU-204ENST00000441818 SOS1Q07889 1333 aaPredicted RBP27.22■■□□□ 1.95
TRMU-204ENST00000441818 NUTM2BA6NNL0 878 aaPredicted RBP27.22■■□□□ 1.95
TRMU-204ENST00000441818 NUTM2EB1AL46 878 aaPredicted RBP27.22■■□□□ 1.95
TRMU-204ENST00000441818 TRIM27P14373 513 aa27.22■■□□□ 1.95
TRMU-204ENST00000441818 NUTM2AQ8IVF1 878 aaPredicted RBP27.22■■□□□ 1.95
TRMU-204ENST00000441818 FTSJ3Q8IY81 847 aaKnown RBP27.22■■□□□ 1.95
TRMU-204ENST00000441818 BTBD11A6QL63 1104 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms