RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 IQSEC2Q5JU85 1478 aa20.64■□□□□ 0.9
PMS1-213ENST00000441310 RNF214Q8ND24 703 aa20.64■□□□□ 0.89
PMS1-213ENST00000441310 MPNDQ8N594 471 aa20.64■□□□□ 0.89
PMS1-213ENST00000441310 PHACTR3Q96KR7 559 aa20.63■□□□□ 0.89
PMS1-213ENST00000441310 EID1Q9Y6B2 187 aa20.63■□□□□ 0.89
PMS1-213ENST00000441310 NRXN3Q9Y4C0 1643 aa20.63■□□□□ 0.89
PMS1-213ENST00000441310 MCM5P33992 734 aa20.62■□□□□ 0.89
PMS1-213ENST00000441310 CCDC27Q2M243 656 aa20.62■□□□□ 0.89
PMS1-213ENST00000441310 COG3Q96JB2 828 aa20.62■□□□□ 0.89
PMS1-213ENST00000441310 LMBRD1Q9NUN5 540 aa20.62■□□□□ 0.89
PMS1-213ENST00000441310 PRPF40AO75400 957 aaKnown RBP20.61■□□□□ 0.89
PMS1-213ENST00000441310 ZNF710Q8N1W2 664 aa20.61■□□□□ 0.89
PMS1-213ENST00000441310 HDAC1Q13547 482 aaPredicted RBP20.61■□□□□ 0.89
PMS1-213ENST00000441310 MYRIPQ8NFW9 859 aa20.61■□□□□ 0.89
PMS1-213ENST00000441310 IGSF3O75054 1194 aa20.6■□□□□ 0.89
PMS1-213ENST00000441310 ATP2B3Q16720 1220 aa20.6■□□□□ 0.89
PMS1-213ENST00000441310 SYCE3A1L190 88 aa20.6■□□□□ 0.89
PMS1-213ENST00000441310 PKP1Q13835 747 aa20.6■□□□□ 0.89
PMS1-213ENST00000441310 GTPBP4Q9BZE4 634 aaKnown RBP20.6■□□□□ 0.89
PMS1-213ENST00000441310 AMOTL2Q9Y2J4 779 aa20.6■□□□□ 0.89
PMS1-213ENST00000441310 CLEC17AQ6ZS10 378 aa20.59■□□□□ 0.89
PMS1-213ENST00000441310 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
PMS1-213ENST00000441310 SETD1AO15047 1707 aaKnown RBP20.59■□□□□ 0.89
PMS1-213ENST00000441310 DLC1Q96QB1 1528 aa20.59■□□□□ 0.89
PMS1-213ENST00000441310 SPDYE4A6NLX3 237 aa20.59■□□□□ 0.89
PMS1-213ENST00000441310 KIAA2012Q0VF49 1180 aa20.59■□□□□ 0.89
PMS1-213ENST00000441310 SMC4Q9NTJ3 1288 aa20.59■□□□□ 0.89
PMS1-213ENST00000441310 ADAMTS13Q76LX8 1427 aa20.58■□□□□ 0.89
PMS1-213ENST00000441310 KIF20AO95235 890 aa20.58■□□□□ 0.88
PMS1-213ENST00000441310 CHAMP1Q96JM3 812 aa20.58■□□□□ 0.88
PMS1-213ENST00000441310 CHMP4BQ9H444 224 aaKnown RBP20.58■□□□□ 0.88
PMS1-213ENST00000441310 RBM33Q96EV2 1170 aaKnown RBP20.57■□□□□ 0.88
PMS1-213ENST00000441310 ELL2O00472 640 aaPredicted RBP20.57■□□□□ 0.88
PMS1-213ENST00000441310 ACEP12821 1306 aa20.57■□□□□ 0.88
PMS1-213ENST00000441310 GPT2Q8TD30 523 aa20.57■□□□□ 0.88
PMS1-213ENST00000441310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.57■□□□□ 0.88
PMS1-213ENST00000441310 NAP1L2Q9ULW6 460 aaPredicted RBP20.56■□□□□ 0.88
PMS1-213ENST00000441310 FCHSD2O94868 740 aa20.56■□□□□ 0.88
PMS1-213ENST00000441310 TRIM27P14373 513 aa20.56■□□□□ 0.88
PMS1-213ENST00000441310 KIF16BQ96L93 1317 aa20.55■□□□□ 0.88
PMS1-213ENST00000441310 SSH1Q8WYL5 1049 aa20.55■□□□□ 0.88
PMS1-213ENST00000441310 CPS1P31327 1500 aa20.55■□□□□ 0.88
PMS1-213ENST00000441310 ATP7BP35670 1465 aa20.55■□□□□ 0.88
PMS1-213ENST00000441310 CPSF1Q10570 1443 aaKnown RBP20.55■□□□□ 0.88
PMS1-213ENST00000441310 PNPLA6Q8IY17 1366 aa20.55■□□□□ 0.88
PMS1-213ENST00000441310 LETM1O95202 739 aaPredicted RBP20.55■□□□□ 0.88
PMS1-213ENST00000441310 DDX19BQ9UMR2 479 aa20.55■□□□□ 0.88
PMS1-213ENST00000441310 EDC4Q6P2E9 1401 aaKnown RBP20.54■□□□□ 0.88
PMS1-213ENST00000441310 ZNF830Q96NB3 372 aaPredicted RBP20.54■□□□□ 0.88
PMS1-213ENST00000441310 TMEM63CQ9P1W3 806 aa20.54■□□□□ 0.88
PMS1-213ENST00000441310 LRSAM1Q6UWE0 723 aa20.54■□□□□ 0.88
PMS1-213ENST00000441310 TBC1D9Q6ZT07 1266 aa20.53■□□□□ 0.88
PMS1-213ENST00000441310 MED14O60244 1454 aa20.53■□□□□ 0.88
PMS1-213ENST00000441310 NUCB2P80303 420 aa20.53■□□□□ 0.88
PMS1-213ENST00000441310 NUCB1Q02818 461 aa20.53■□□□□ 0.88
PMS1-213ENST00000441310 CHD1LQ86WJ1 897 aa20.53■□□□□ 0.88
PMS1-213ENST00000441310 IL13P35225 146 aa20.53■□□□□ 0.88
PMS1-213ENST00000441310 FOXD4L5Q5VV16 416 aaPredicted RBP20.53■□□□□ 0.88
PMS1-213ENST00000441310 FOXD4L4Q8WXT5 416 aaPredicted RBP20.53■□□□□ 0.88
PMS1-213ENST00000441310 UBR1Q8IWV7 1749 aa20.53■□□□□ 0.88
PMS1-213ENST00000441310 VGLL3A8MV65 326 aa20.52■□□□□ 0.88
PMS1-213ENST00000441310 DCTN1Q14203 1278 aa20.52■□□□□ 0.88
PMS1-213ENST00000441310 C17orf53Q8N3J3 647 aaPredicted RBP20.52■□□□□ 0.88
PMS1-213ENST00000441310 NSFL1CQ9UNZ2 370 aaKnown RBP20.52■□□□□ 0.88
PMS1-213ENST00000441310 MAP2P11137 1827 aaKnown RBP20.52■□□□□ 0.88
PMS1-213ENST00000441310 FAM83GA6ND36 823 aa20.52■□□□□ 0.88
PMS1-213ENST00000441310 FAM135BQ49AJ0 1406 aa20.52■□□□□ 0.87
PMS1-213ENST00000441310 AEBP1Q8IUX7 1158 aa20.51■□□□□ 0.87
PMS1-213ENST00000441310 PTPRUQ92729 1446 aa20.51■□□□□ 0.87
PMS1-213ENST00000441310 NUTM2GQ5VZR2 741 aa20.51■□□□□ 0.87
PMS1-213ENST00000441310 TMEM57Q8N5G2 664 aa20.51■□□□□ 0.87
PMS1-213ENST00000441310 TTC21BQ7Z4L5 1316 aa20.51■□□□□ 0.87
PMS1-213ENST00000441310 BMP2KLQ5H9B9 411 aa20.51■□□□□ 0.87
PMS1-213ENST00000441310 ANKRD45Q5TZF3 282 aa20.51■□□□□ 0.87
PMS1-213ENST00000441310 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
PMS1-213ENST00000441310 SIRT1Q96EB6 747 aa20.5■□□□□ 0.87
PMS1-213ENST00000441310 TMEM51Q9NW97 253 aa20.5■□□□□ 0.87
PMS1-213ENST00000441310 PLEKHG1Q9ULL1 1385 aa20.5■□□□□ 0.87
PMS1-213ENST00000441310 NGDNQ8NEJ9 315 aaKnown RBP20.5■□□□□ 0.87
PMS1-213ENST00000441310 KIF20BQ96Q89 1820 aa20.49■□□□□ 0.87
PMS1-213ENST00000441310 NOB1Q9ULX3 412 aaKnown RBP20.49■□□□□ 0.87
PMS1-213ENST00000441310 PRIMPOLQ96LW4 560 aa20.49■□□□□ 0.87
PMS1-213ENST00000441310 CGNQ9P2M7 1197 aaKnown RBP20.49■□□□□ 0.87
PMS1-213ENST00000441310 KIF3AQ9Y496 699 aa20.49■□□□□ 0.87
PMS1-213ENST00000441310 HSP90AB2PQ58FF8 381 aa20.48■□□□□ 0.87
PMS1-213ENST00000441310 TECPR2O15040 1411 aa20.48■□□□□ 0.87
PMS1-213ENST00000441310 ZBTB22O15209 634 aa20.48■□□□□ 0.87
PMS1-213ENST00000441310 NFE2L2Q16236 605 aa20.48■□□□□ 0.87
PMS1-213ENST00000441310 HMGN5P82970 282 aaKnown RBP20.48■□□□□ 0.87
PMS1-213ENST00000441310 ATF7IPQ6VMQ6 1270 aa20.48■□□□□ 0.87
PMS1-213ENST00000441310 LRRC7Q96NW7 1537 aa20.47■□□□□ 0.87
PMS1-213ENST00000441310 ANKRD26Q9UPS8 1709 aa20.47■□□□□ 0.87
PMS1-213ENST00000441310 SULT6B1Q6IMI4 303 aa20.47■□□□□ 0.87
PMS1-213ENST00000441310 ZGPATQ8N5A5 531 aaKnown RBP20.47■□□□□ 0.87
PMS1-213ENST00000441310 BCL2L12Q9HB09 334 aa20.47■□□□□ 0.87
PMS1-213ENST00000441310 ADGRB2O60241 1585 aa20.47■□□□□ 0.87
PMS1-213ENST00000441310 CYP2E1P05181 493 aaPredicted RBP20.46■□□□□ 0.87
PMS1-213ENST00000441310 KCNA6P17658 529 aa20.46■□□□□ 0.87
PMS1-213ENST00000441310 NOLC1Q14978 699 aaKnown RBP eCLIP20.46■□□□□ 0.87
PMS1-213ENST00000441310 PDCL2Q8N4E4 241 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms