RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
AP004290.1-201ENST00000440915 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
AP004290.1-201ENST00000440915 TATP17735 454 aaPredicted RBP13.53□□□□□ -0.24
AP004290.1-201ENST00000440915 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
AP004290.1-201ENST00000440915 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
AP004290.1-201ENST00000440915 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
AP004290.1-201ENST00000440915 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
AP004290.1-201ENST00000440915 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
AP004290.1-201ENST00000440915 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.25
AP004290.1-201ENST00000440915 UNC5CLQ8IV45 518 aa13.52□□□□□ -0.25
AP004290.1-201ENST00000440915 MEGF6O75095 1541 aa13.52□□□□□ -0.25
AP004290.1-201ENST00000440915 BCL9LQ86UU0 1499 aa13.51□□□□□ -0.25
AP004290.1-201ENST00000440915 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
AP004290.1-201ENST00000440915 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
AP004290.1-201ENST00000440915 CENPBP07199 599 aaPredicted RBP13.5□□□□□ -0.25
AP004290.1-201ENST00000440915 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
AP004290.1-201ENST00000440915 USP35Q9P2H5 1018 aa13.5□□□□□ -0.25
AP004290.1-201ENST00000440915 DLG5Q8TDM6 1919 aa13.5□□□□□ -0.25
AP004290.1-201ENST00000440915 IL2RBP14784 551 aa13.49□□□□□ -0.25
AP004290.1-201ENST00000440915 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
AP004290.1-201ENST00000440915 USP21Q9UK80 565 aa13.49□□□□□ -0.25
AP004290.1-201ENST00000440915 SPATA31A1Q5TZJ5 1347 aa13.49□□□□□ -0.25
AP004290.1-201ENST00000440915 SPATA31A5Q5VU36 1347 aa13.49□□□□□ -0.25
AP004290.1-201ENST00000440915 SPATA31A7Q8IWB4 1347 aa13.49□□□□□ -0.25
AP004290.1-201ENST00000440915 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
AP004290.1-201ENST00000440915 OVOS2A0A0G2JMS6 1433 aa13.49□□□□□ -0.25
AP004290.1-201ENST00000440915 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.48□□□□□ -0.25
AP004290.1-201ENST00000440915 GOLGA2Q08379 1002 aa13.48□□□□□ -0.25
AP004290.1-201ENST00000440915 WDR63Q8IWG1 891 aa13.48□□□□□ -0.25
AP004290.1-201ENST00000440915 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
AP004290.1-201ENST00000440915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
AP004290.1-201ENST00000440915 SPG7Q9UQ90 795 aa13.48□□□□□ -0.25
AP004290.1-201ENST00000440915 AFF2P51816 1311 aa13.48□□□□□ -0.25
AP004290.1-201ENST00000440915 PKD1L3Q7Z443 1732 aa13.48□□□□□ -0.25
AP004290.1-201ENST00000440915 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 VPS72Q15906 364 aa13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 AKAP4Q5JQC9 854 aa13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 THRAP3Q9Y2W1 955 aaKnown RBP13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 CCDC9Q9Y3X0 531 aaKnown RBP13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 DISP2A7MBM2 1401 aa13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
AP004290.1-201ENST00000440915 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.25
AP004290.1-201ENST00000440915 ZBTB22O15209 634 aa13.46□□□□□ -0.26
AP004290.1-201ENST00000440915 SLFN5Q08AF3 891 aa13.46□□□□□ -0.26
AP004290.1-201ENST00000440915 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.26
AP004290.1-201ENST00000440915 MCM10Q7L590 875 aa13.46□□□□□ -0.26
AP004290.1-201ENST00000440915 ZCRB1Q8TBF4 217 aaKnown RBP13.46□□□□□ -0.26
AP004290.1-201ENST00000440915 THUMPD2Q9BTF0 503 aaKnown RBP13.46□□□□□ -0.26
AP004290.1-201ENST00000440915 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.26
AP004290.1-201ENST00000440915 IL16Q14005 1332 aa13.45□□□□□ -0.26
AP004290.1-201ENST00000440915 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
AP004290.1-201ENST00000440915 CDCA7Q9BWT1 371 aaPredicted RBP13.45□□□□□ -0.26
AP004290.1-201ENST00000440915 E9PSI1 815 aa13.44□□□□□ -0.26
AP004290.1-201ENST00000440915 PHKG2P15735 406 aa13.44□□□□□ -0.26
AP004290.1-201ENST00000440915 CALD1Q05682 793 aaKnown RBP13.44□□□□□ -0.26
AP004290.1-201ENST00000440915 TRMT2AQ8IZ69 625 aaKnown RBP13.44□□□□□ -0.26
AP004290.1-201ENST00000440915 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
AP004290.1-201ENST00000440915 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
AP004290.1-201ENST00000440915 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
AP004290.1-201ENST00000440915 CYP27B1O15528 508 aa13.43□□□□□ -0.26
AP004290.1-201ENST00000440915 DUSP27Q5VZP5 1158 aa13.43□□□□□ -0.26
AP004290.1-201ENST00000440915 IL17REQ8NFR9 667 aa13.43□□□□□ -0.26
AP004290.1-201ENST00000440915 ATRNO75882 1429 aa13.43□□□□□ -0.26
AP004290.1-201ENST00000440915 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
AP004290.1-201ENST00000440915 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
AP004290.1-201ENST00000440915 LGR6Q9HBX8 967 aa13.42□□□□□ -0.26
AP004290.1-201ENST00000440915 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
AP004290.1-201ENST00000440915 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
AP004290.1-201ENST00000440915 EXOC5O00471 708 aa13.41□□□□□ -0.26
AP004290.1-201ENST00000440915 RNMTO43148 476 aaKnown RBP13.41□□□□□ -0.26
AP004290.1-201ENST00000440915 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
AP004290.1-201ENST00000440915 CEMIPQ8WUJ3 1361 aa13.41□□□□□ -0.26
AP004290.1-201ENST00000440915 ADAMTS7Q9UKP4 1686 aa13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 GNAI1P63096 354 aa13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 DDX54Q8TDD1 881 aaKnown RBP13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 QTRT2Q9H974 415 aaKnown RBP13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 GLI3P10071 1580 aa13.4□□□□□ -0.26
AP004290.1-201ENST00000440915 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 CFAP44Q96MT7 982 aa13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 TNS2Q63HR2 1409 aa13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 DDB1Q16531 1140 aa13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 ZNF772Q68DY9 489 aaPredicted RBP13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 TSR2Q969E8 191 aaKnown RBP13.39□□□□□ -0.27
AP004290.1-201ENST00000440915 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
AP004290.1-201ENST00000440915 CHL1O00533 1208 aa13.38□□□□□ -0.27
AP004290.1-201ENST00000440915 MBIPQ9NS73 344 aa13.38□□□□□ -0.27
AP004290.1-201ENST00000440915 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms