RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 LARP1Q6PKG0 1096 aaKnown RBP36.39■■■■□ 3.42
CGREF1-207ENST00000440612 IFT57Q9NWB7 429 aa36.39■■■■□ 3.42
CGREF1-207ENST00000440612 GNAT3A8MTJ3 354 aa36.38■■■■□ 3.41
CGREF1-207ENST00000440612 AMOTQ4VCS5 1084 aa36.38■■■■□ 3.41
CGREF1-207ENST00000440612 PLEKHO1Q53GL0 409 aaPredicted RBP36.38■■■■□ 3.41
CGREF1-207ENST00000440612 PLEKHG2Q9H7P9 1386 aa36.37■■■■□ 3.41
CGREF1-207ENST00000440612 CARD10Q9BWT7 1032 aa36.36■■■■□ 3.41
CGREF1-207ENST00000440612 TOM1L2Q6ZVM7 507 aa36.35■■■■□ 3.41
CGREF1-207ENST00000440612 STRN4Q9NRL3 753 aa36.35■■■■□ 3.41
CGREF1-207ENST00000440612 LRRC37A3O60309 1634 aa36.35■■■■□ 3.41
CGREF1-207ENST00000440612 CFAP44Q96MT7 982 aa36.35■■■■□ 3.41
CGREF1-207ENST00000440612 ADAMTS2O95450 1211 aa36.34■■■■□ 3.41
CGREF1-207ENST00000440612 IL17REQ8NFR9 667 aa36.34■■■■□ 3.41
CGREF1-207ENST00000440612 RAPGEF4Q8WZA2 1011 aa36.34■■■■□ 3.41
CGREF1-207ENST00000440612 GNAI1P63096 354 aa36.33■■■■□ 3.41
CGREF1-207ENST00000440612 RTF1Q92541 710 aaKnown RBP36.32■■■■□ 3.41
CGREF1-207ENST00000440612 EVA1CP58658 441 aa36.32■■■■□ 3.4
CGREF1-207ENST00000440612 NUTM2BA6NNL0 878 aaPredicted RBP36.31■■■■□ 3.4
CGREF1-207ENST00000440612 NUTM2EB1AL46 878 aaPredicted RBP36.31■■■■□ 3.4
CGREF1-207ENST00000440612 TATP17735 454 aaPredicted RBP36.31■■■■□ 3.4
CGREF1-207ENST00000440612 ZNF530Q6P9A1 599 aaPredicted RBP36.31■■■■□ 3.4
CGREF1-207ENST00000440612 NUTM2AQ8IVF1 878 aaPredicted RBP36.31■■■■□ 3.4
CGREF1-207ENST00000440612 MBIPQ9NS73 344 aa36.31■■■■□ 3.4
CGREF1-207ENST00000440612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.31■■■■□ 3.4
CGREF1-207ENST00000440612 PLCH1Q4KWH8 1693 aa36.31■■■■□ 3.4
CGREF1-207ENST00000440612 HSPA1LP34931 641 aa36.3■■■■□ 3.4
CGREF1-207ENST00000440612 CEMIPQ8WUJ3 1361 aa36.29■■■■□ 3.4
CGREF1-207ENST00000440612 EXOSC9Q06265 439 aaKnown RBP36.29■■■■□ 3.4
CGREF1-207ENST00000440612 AKAP4Q5JQC9 854 aa36.29■■■■□ 3.4
CGREF1-207ENST00000440612 LAS1LQ9Y4W2 734 aaKnown RBP36.29■■■■□ 3.4
CGREF1-207ENST00000440612 OVOS2A0A0G2JMS6 1433 aa36.29■■■■□ 3.4
CGREF1-207ENST00000440612 CHL1O00533 1208 aa36.29■■■■□ 3.4
CGREF1-207ENST00000440612 PKD1L3Q7Z443 1732 aa36.28■■■■□ 3.4
CGREF1-207ENST00000440612 RRP1P56182 461 aaKnown RBP36.26■■■■□ 3.39
CGREF1-207ENST00000440612 NRAPQ86VF7 1730 aa36.26■■■■□ 3.39
CGREF1-207ENST00000440612 SLIT2O94813 1529 aa36.24■■■■□ 3.39
CGREF1-207ENST00000440612 FKBP8Q14318 412 aa36.24■■■■□ 3.39
CGREF1-207ENST00000440612 LGR6Q9HBX8 967 aa36.24■■■■□ 3.39
CGREF1-207ENST00000440612 ADAMTS7Q9UKP4 1686 aa36.23■■■■□ 3.39
CGREF1-207ENST00000440612 SPATA31A6Q5VVP1 1343 aa36.22■■■■□ 3.39
CGREF1-207ENST00000440612 CT47B1P0C2W7 299 aaPredicted RBP36.22■■■■□ 3.39
CGREF1-207ENST00000440612 IRX6P78412 446 aaPredicted RBP36.22■■■■□ 3.39
CGREF1-207ENST00000440612 SPG7Q9UQ90 795 aa36.22■■■■□ 3.39
CGREF1-207ENST00000440612 PARP4Q9UKK3 1724 aaKnown RBP36.22■■■■□ 3.39
CGREF1-207ENST00000440612 LRP6O75581 1613 aa36.21■■■■□ 3.39
CGREF1-207ENST00000440612 NEFLP07196 543 aa36.21■■■■□ 3.39
CGREF1-207ENST00000440612 RARSP54136 660 aaKnown RBP36.19■■■■□ 3.38
CGREF1-207ENST00000440612 C1orf141Q5JVX7 400 aa36.19■■■■□ 3.38
CGREF1-207ENST00000440612 CYP27B1O15528 508 aa36.19■■■■□ 3.38
CGREF1-207ENST00000440612 IL2RBP14784 551 aa36.19■■■■□ 3.38
CGREF1-207ENST00000440612 PHKG2P15735 406 aa36.19■■■■□ 3.38
CGREF1-207ENST00000440612 MPRIPQ6WCQ1 1025 aa36.19■■■■□ 3.38
CGREF1-207ENST00000440612 NWD2Q9ULI1 1742 aa36.18■■■■□ 3.38
CGREF1-207ENST00000440612 BCAR3O75815 825 aa36.18■■■■□ 3.38
CGREF1-207ENST00000440612 MIS18AQ9NYP9 233 aa36.17■■■■□ 3.38
CGREF1-207ENST00000440612 DISP2A7MBM2 1401 aa36.17■■■■□ 3.38
CGREF1-207ENST00000440612 RNMTO43148 476 aaKnown RBP36.16■■■■□ 3.38
CGREF1-207ENST00000440612 TSPYL6Q8N831 410 aa36.15■■■■□ 3.38
CGREF1-207ENST00000440612 KDM6AO15550 1401 aaPredicted RBP36.14■■■■□ 3.38
CGREF1-207ENST00000440612 C8orf58Q8NAV2 365 aa36.14■■■■□ 3.38
CGREF1-207ENST00000440612 USP35Q9P2H5 1018 aa36.14■■■■□ 3.38
CGREF1-207ENST00000440612 PLIN1O60240 522 aa36.13■■■■□ 3.37
CGREF1-207ENST00000440612 TAF7Q15545 349 aaPredicted RBP36.13■■■■□ 3.37
CGREF1-207ENST00000440612 IFNL2Q8IZJ0 200 aa36.13■■■■□ 3.37
CGREF1-207ENST00000440612 SHANK3Q9BYB0 1731 aa36.12■■■■□ 3.37
CGREF1-207ENST00000440612 VAMP4O75379 141 aa36.12■■■■□ 3.37
CGREF1-207ENST00000440612 ZCRB1Q8TBF4 217 aaKnown RBP36.12■■■■□ 3.37
CGREF1-207ENST00000440612 BABAM1Q9NWV8 329 aa36.12■■■■□ 3.37
CGREF1-207ENST00000440612 TSPYL4Q9UJ04 414 aa36.11■■■■□ 3.37
CGREF1-207ENST00000440612 VIRMAQ69YN4 1812 aaKnown RBP36.1■■■■□ 3.37
CGREF1-207ENST00000440612 BCL9LQ86UU0 1499 aa36.1■■■■□ 3.37
CGREF1-207ENST00000440612 SPATA31A1Q5TZJ5 1347 aa36.09■■■■□ 3.37
CGREF1-207ENST00000440612 KRT24Q2M2I5 525 aa36.09■■■■□ 3.37
CGREF1-207ENST00000440612 FNBP4Q8N3X1 1017 aaPredicted RBP36.08■■■■□ 3.37
CGREF1-207ENST00000440612 C8orf37Q96NL8 207 aa36.07■■■■□ 3.37
CGREF1-207ENST00000440612 SCN11AQ9UI33 1791 aa36.07■■■■□ 3.36
CGREF1-207ENST00000440612 PCDH11XQ9BZA7 1347 aa36.07■■■■□ 3.36
CGREF1-207ENST00000440612 PCDH11YQ9BZA8 1340 aa36.07■■■■□ 3.36
CGREF1-207ENST00000440612 SSH1Q8WYL5 1049 aa36.07■■■■□ 3.36
CGREF1-207ENST00000440612 SIPA1L3O60292 1781 aaPredicted RBP36.06■■■■□ 3.36
CGREF1-207ENST00000440612 TWISTNBQ3B726 338 aaPredicted RBP36.06■■■■□ 3.36
CGREF1-207ENST00000440612 SPATA31A5Q5VU36 1347 aa36.05■■■■□ 3.36
CGREF1-207ENST00000440612 SPATA31A7Q8IWB4 1347 aa36.05■■■■□ 3.36
CGREF1-207ENST00000440612 UNC5CLQ8IV45 518 aa36.05■■■■□ 3.36
CGREF1-207ENST00000440612 BCL2L13Q9BXK5 485 aa36.05■■■■□ 3.36
CGREF1-207ENST00000440612 ELL2O00472 640 aaPredicted RBP36.04■■■■□ 3.36
CGREF1-207ENST00000440612 ZNF428Q96B54 188 aa36.04■■■■□ 3.36
CGREF1-207ENST00000440612 NGLY1Q96IV0 654 aa36.04■■■■□ 3.36
CGREF1-207ENST00000440612 DCAF5Q96JK2 942 aa36.04■■■■□ 3.36
CGREF1-207ENST00000440612 WNK3Q9BYP7 1800 aa36.04■■■■□ 3.36
CGREF1-207ENST00000440612 TEFQ10587 303 aa36.03■■■■□ 3.36
CGREF1-207ENST00000440612 MRC1P22897 1456 aa36.02■■■■□ 3.36
CGREF1-207ENST00000440612 KDM3BQ7LBC6 1761 aa36.02■■■■□ 3.36
CGREF1-207ENST00000440612 NKX1-1Q15270 411 aaPredicted RBP36.02■■■■□ 3.36
CGREF1-207ENST00000440612 C20orf194Q5TEA3 1177 aa36.02■■■■□ 3.36
CGREF1-207ENST00000440612 ALDH1L2Q3SY69 923 aa36.01■■■■□ 3.36
CGREF1-207ENST00000440612 THRAP3Q9Y2W1 955 aaKnown RBP36.01■■■■□ 3.36
CGREF1-207ENST00000440612 HSP90AB1P08238 724 aaKnown RBP36■■■■□ 3.35
CGREF1-207ENST00000440612 ERICH6BQ5W0A0 696 aa36■■■■□ 3.35
CGREF1-207ENST00000440612 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms