RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 RAPGEF4Q8WZA2 1011 aa27.76■■■□□ 2.04
CDKN1C-204ENST00000440480 COL5A2P05997 1499 aaPredicted RBP27.76■■■□□ 2.03
CDKN1C-204ENST00000440480 CALD1Q05682 793 aaKnown RBP27.76■■■□□ 2.03
CDKN1C-204ENST00000440480 PLEKHO1Q53GL0 409 aaPredicted RBP27.76■■■□□ 2.03
CDKN1C-204ENST00000440480 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.76■■■□□ 2.03
CDKN1C-204ENST00000440480 AMOTQ4VCS5 1084 aa27.75■■■□□ 2.03
CDKN1C-204ENST00000440480 RTF1Q92541 710 aaKnown RBP27.74■■■□□ 2.03
CDKN1C-204ENST00000440480 LARP1Q6PKG0 1096 aaKnown RBP27.74■■■□□ 2.03
CDKN1C-204ENST00000440480 MYH16Q9H6N6 1097 aa27.74■■■□□ 2.03
CDKN1C-204ENST00000440480 LMO7Q8WWI1 1683 aa27.73■■■□□ 2.03
CDKN1C-204ENST00000440480 IL16Q14005 1332 aa27.73■■■□□ 2.03
CDKN1C-204ENST00000440480 CARD10Q9BWT7 1032 aa27.72■■■□□ 2.03
CDKN1C-204ENST00000440480 TATP17735 454 aaPredicted RBP27.71■■■□□ 2.03
CDKN1C-204ENST00000440480 DCTN1Q14203 1278 aa27.71■■■□□ 2.03
CDKN1C-204ENST00000440480 THUMPD2Q9BTF0 503 aaKnown RBP27.71■■■□□ 2.03
CDKN1C-204ENST00000440480 GNAT3A8MTJ3 354 aa27.71■■■□□ 2.03
CDKN1C-204ENST00000440480 RGPD2P0DJD1 1756 aa27.7■■■□□ 2.03
CDKN1C-204ENST00000440480 HTATSF1O43719 755 aaKnown RBP27.7■■■□□ 2.02
CDKN1C-204ENST00000440480 SPATA31A6Q5VVP1 1343 aa27.7■■■□□ 2.02
CDKN1C-204ENST00000440480 MCM10Q7L590 875 aa27.69■■■□□ 2.02
CDKN1C-204ENST00000440480 LAS1LQ9Y4W2 734 aaKnown RBP27.67■■■□□ 2.02
CDKN1C-204ENST00000440480 COL14A1Q05707 1796 aaKnown RBP27.67■■■□□ 2.02
CDKN1C-204ENST00000440480 ZNF530Q6P9A1 599 aaPredicted RBP27.67■■■□□ 2.02
CDKN1C-204ENST00000440480 EXOC6Q8TAG9 804 aa27.67■■■□□ 2.02
CDKN1C-204ENST00000440480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.66■■■□□ 2.02
CDKN1C-204ENST00000440480 USP35Q9P2H5 1018 aa27.66■■■□□ 2.02
CDKN1C-204ENST00000440480 SPG7Q9UQ90 795 aa27.65■■■□□ 2.02
CDKN1C-204ENST00000440480 FAM208AQ9UK61 1670 aaKnown RBP27.65■■■□□ 2.02
CDKN1C-204ENST00000440480 CRB1P82279 1406 aa27.65■■■□□ 2.02
CDKN1C-204ENST00000440480 GNAI1P63096 354 aa27.64■■■□□ 2.02
CDKN1C-204ENST00000440480 AKAP4Q5JQC9 854 aa27.64■■■□□ 2.02
CDKN1C-204ENST00000440480 C1orf141Q5JVX7 400 aa27.64■■■□□ 2.02
CDKN1C-204ENST00000440480 IFT57Q9NWB7 429 aa27.64■■■□□ 2.02
CDKN1C-204ENST00000440480 MAP3K5Q99683 1374 aa27.64■■■□□ 2.02
CDKN1C-204ENST00000440480 TSR2Q969E8 191 aaKnown RBP27.63■■■□□ 2.01
CDKN1C-204ENST00000440480 NGLY1Q96IV0 654 aa27.63■■■□□ 2.01
CDKN1C-204ENST00000440480 CFAP44Q96MT7 982 aa27.63■■■□□ 2.01
CDKN1C-204ENST00000440480 IL2RBP14784 551 aa27.62■■■□□ 2.01
CDKN1C-204ENST00000440480 C8orf37Q96NL8 207 aa27.62■■■□□ 2.01
CDKN1C-204ENST00000440480 FANCIQ9NVI1 1328 aa27.62■■■□□ 2.01
CDKN1C-204ENST00000440480 PLEKHG2Q9H7P9 1386 aa27.62■■■□□ 2.01
CDKN1C-204ENST00000440480 LRP6O75581 1613 aa27.62■■■□□ 2.01
CDKN1C-204ENST00000440480 ZNF853P0CG23 659 aa27.6■■■□□ 2.01
CDKN1C-204ENST00000440480 IL17REQ8NFR9 667 aa27.6■■■□□ 2.01
CDKN1C-204ENST00000440480 MEGF6O75095 1541 aa27.6■■■□□ 2.01
CDKN1C-204ENST00000440480 RBM19Q9Y4C8 960 aaKnown RBP27.6■■■□□ 2.01
CDKN1C-204ENST00000440480 PLIN1O60240 522 aa27.59■■■□□ 2.01
CDKN1C-204ENST00000440480 DLG5Q8TDM6 1919 aa27.58■■■□□ 2.01
CDKN1C-204ENST00000440480 MPRIPQ6WCQ1 1025 aa27.57■■■□□ 2
CDKN1C-204ENST00000440480 ZCRB1Q8TBF4 217 aaKnown RBP27.57■■■□□ 2
CDKN1C-204ENST00000440480 IFNL2Q8IZJ0 200 aa27.56■■■□□ 2
CDKN1C-204ENST00000440480 LGR6Q9HBX8 967 aa27.56■■■□□ 2
CDKN1C-204ENST00000440480 MBIPQ9NS73 344 aa27.56■■■□□ 2
CDKN1C-204ENST00000440480 CHL1O00533 1208 aa27.55■■■□□ 2
CDKN1C-204ENST00000440480 MEX3CQ5U5Q3 659 aaKnown RBP27.55■■■□□ 2
CDKN1C-204ENST00000440480 UNC5CLQ8IV45 518 aa27.55■■■□□ 2
CDKN1C-204ENST00000440480 OVOS2A0A0G2JMS6 1433 aa27.55■■■□□ 2
CDKN1C-204ENST00000440480 EXOSC9Q06265 439 aaKnown RBP27.55■■■□□ 2
CDKN1C-204ENST00000440480 ILDR1Q86SU0 546 aaPredicted RBP27.55■■■□□ 2
CDKN1C-204ENST00000440480 SLIT2O94813 1529 aa27.55■■■□□ 2
CDKN1C-204ENST00000440480 PHKG2P15735 406 aa27.54■■■□□ 2
CDKN1C-204ENST00000440480 FNBP4Q8N3X1 1017 aaPredicted RBP27.54■■■□□ 2
CDKN1C-204ENST00000440480 CRBNQ96SW2 442 aa27.54■■■□□ 2
CDKN1C-204ENST00000440480 TAF7Q15545 349 aaPredicted RBP27.53■■■□□ 2
CDKN1C-204ENST00000440480 CCDC9Q9Y3X0 531 aaKnown RBP27.53■■■□□ 2
CDKN1C-204ENST00000440480 PLCH1Q4KWH8 1693 aa27.52■■■□□ 2
CDKN1C-204ENST00000440480 RNMTO43148 476 aaKnown RBP27.52■■■□□ 2
CDKN1C-204ENST00000440480 CT47B1P0C2W7 299 aaPredicted RBP27.52■■■□□ 2
CDKN1C-204ENST00000440480 CEMIPQ8WUJ3 1361 aa27.51■■□□□ 1.99
CDKN1C-204ENST00000440480 CYP27B1O15528 508 aa27.51■■□□□ 1.99
CDKN1C-204ENST00000440480 THRAP3Q9Y2W1 955 aaKnown RBP27.51■■□□□ 1.99
CDKN1C-204ENST00000440480 SPATA31A1Q5TZJ5 1347 aa27.51■■□□□ 1.99
CDKN1C-204ENST00000440480 TEFQ10587 303 aa27.51■■□□□ 1.99
CDKN1C-204ENST00000440480 MIS18AQ9NYP9 233 aa27.51■■□□□ 1.99
CDKN1C-204ENST00000440480 HSP90AB1P08238 724 aaKnown RBP27.5■■□□□ 1.99
CDKN1C-204ENST00000440480 TSPYL4Q9UJ04 414 aa27.5■■□□□ 1.99
CDKN1C-204ENST00000440480 PCDH11XQ9BZA7 1347 aa27.5■■□□□ 1.99
CDKN1C-204ENST00000440480 PCDH11YQ9BZA8 1340 aa27.5■■□□□ 1.99
CDKN1C-204ENST00000440480 BABAM1Q9NWV8 329 aa27.48■■□□□ 1.99
CDKN1C-204ENST00000440480 USP21Q9UK80 565 aa27.48■■□□□ 1.99
CDKN1C-204ENST00000440480 SPATA31A5Q5VU36 1347 aa27.48■■□□□ 1.99
CDKN1C-204ENST00000440480 SPATA31A7Q8IWB4 1347 aa27.48■■□□□ 1.99
CDKN1C-204ENST00000440480 DDX54Q8TDD1 881 aaKnown RBP27.48■■□□□ 1.99
CDKN1C-204ENST00000440480 DCAF5Q96JK2 942 aa27.48■■□□□ 1.99
CDKN1C-204ENST00000440480 CDCA7Q9BWT1 371 aaPredicted RBP27.47■■□□□ 1.99
CDKN1C-204ENST00000440480 BCL9LQ86UU0 1499 aa27.47■■□□□ 1.99
CDKN1C-204ENST00000440480 VPS72Q15906 364 aa27.46■■□□□ 1.99
CDKN1C-204ENST00000440480 EXOC5O00471 708 aa27.45■■□□□ 1.98
CDKN1C-204ENST00000440480 PDE3AQ14432 1141 aa27.44■■□□□ 1.98
CDKN1C-204ENST00000440480 NWD2Q9ULI1 1742 aa27.44■■□□□ 1.98
CDKN1C-204ENST00000440480 RARSP54136 660 aaKnown RBP27.44■■□□□ 1.98
CDKN1C-204ENST00000440480 C20orf194Q5TEA3 1177 aa27.44■■□□□ 1.98
CDKN1C-204ENST00000440480 ELL2O00472 640 aaPredicted RBP27.43■■□□□ 1.98
CDKN1C-204ENST00000440480 C8orf58Q8NAV2 365 aa27.43■■□□□ 1.98
CDKN1C-204ENST00000440480 NRAPQ86VF7 1730 aa27.42■■□□□ 1.98
CDKN1C-204ENST00000440480 PARP4Q9UKK3 1724 aaKnown RBP27.42■■□□□ 1.98
CDKN1C-204ENST00000440480 BTBD11A6QL63 1104 aa27.42■■□□□ 1.98
CDKN1C-204ENST00000440480 BCAR3O75815 825 aa27.42■■□□□ 1.98
CDKN1C-204ENST00000440480 BARGINQ6ZT62 677 aa27.42■■□□□ 1.98
CDKN1C-204ENST00000440480 DISP2A7MBM2 1401 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms