RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 COL24A1Q17RW2 1714 aa9.84□□□□□ -0.83
PTPA-221ENST00000440346 TUBGCP6Q96RT7 1819 aa9.84□□□□□ -0.83
PTPA-221ENST00000440346 EDC4Q6P2E9 1401 aaKnown RBP9.83□□□□□ -0.84
PTPA-221ENST00000440346 SHANK3Q9BYB0 1731 aa9.83□□□□□ -0.84
PTPA-221ENST00000440346 ZBTB7AO95365 584 aa9.83□□□□□ -0.84
PTPA-221ENST00000440346 SLC15A2Q16348 729 aa9.83□□□□□ -0.84
PTPA-221ENST00000440346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTPA-221ENST00000440346 TERF2IPQ9NYB0 399 aa9.83□□□□□ -0.84
PTPA-221ENST00000440346 MAP2P11137 1827 aaKnown RBP9.83□□□□□ -0.84
PTPA-221ENST00000440346 A0A1W2PP64 1363 aa9.83□□□□□ -0.84
PTPA-221ENST00000440346 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
PTPA-221ENST00000440346 HDGFL2Q7Z4V5 671 aaPredicted RBP9.82□□□□□ -0.84
PTPA-221ENST00000440346 STK32BQ9NY57 414 aa9.82□□□□□ -0.84
PTPA-221ENST00000440346 LY75O60449 1722 aa9.82□□□□□ -0.84
PTPA-221ENST00000440346 IL2RBP14784 551 aa9.81□□□□□ -0.84
PTPA-221ENST00000440346 TMC1Q8TDI8 760 aa9.81□□□□□ -0.84
PTPA-221ENST00000440346 SGIP1Q9BQI5 828 aa9.81□□□□□ -0.84
PTPA-221ENST00000440346 SLC12A5Q9H2X9 1139 aa9.81□□□□□ -0.84
PTPA-221ENST00000440346 NLRP2Q9NX02 1062 aa9.81□□□□□ -0.84
PTPA-221ENST00000440346 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
PTPA-221ENST00000440346 DOT1LQ8TEK3 1739 aa9.81□□□□□ -0.84
PTPA-221ENST00000440346 ANKRD24Q8TF21 1146 aa9.8□□□□□ -0.84
PTPA-221ENST00000440346 ACSBG1Q96GR2 724 aa9.8□□□□□ -0.84
PTPA-221ENST00000440346 MTFR1LQ9H019 292 aa9.79□□□□□ -0.84
PTPA-221ENST00000440346 ZNF316A6NFI3 1004 aaPredicted RBP9.78□□□□□ -0.84
PTPA-221ENST00000440346 ZNF827Q17R98 1081 aa9.78□□□□□ -0.84
PTPA-221ENST00000440346 SYT17Q9BSW7 474 aa9.78□□□□□ -0.84
PTPA-221ENST00000440346 FHDC1Q9C0D6 1143 aaPredicted RBP9.78□□□□□ -0.84
PTPA-221ENST00000440346 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
PTPA-221ENST00000440346 MAP3K5Q99683 1374 aa9.77□□□□□ -0.84
PTPA-221ENST00000440346 IP6K1Q92551 441 aa9.77□□□□□ -0.85
PTPA-221ENST00000440346 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
PTPA-221ENST00000440346 GOLGB1Q14789 3259 aaKnown RBP9.77□□□□□ -0.85
PTPA-221ENST00000440346 NSD2O96028 1365 aa9.76□□□□□ -0.85
PTPA-221ENST00000440346 NSD3Q9BZ95 1437 aa9.76□□□□□ -0.85
PTPA-221ENST00000440346 TAF1LQ8IZX4 1826 aa9.75□□□□□ -0.85
PTPA-221ENST00000440346 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
PTPA-221ENST00000440346 AKT1S1Q96B36 256 aa9.75□□□□□ -0.85
PTPA-221ENST00000440346 PANK3Q9H999 370 aa9.75□□□□□ -0.85
PTPA-221ENST00000440346 MEGF6O75095 1541 aa9.75□□□□□ -0.85
PTPA-221ENST00000440346 CGNL1Q0VF96 1302 aa9.75□□□□□ -0.85
PTPA-221ENST00000440346 MAP3K19Q56UN5 1328 aa9.75□□□□□ -0.85
PTPA-221ENST00000440346 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
PTPA-221ENST00000440346 FBLN1P23142 703 aa9.74□□□□□ -0.85
PTPA-221ENST00000440346 HOXC9P31274 260 aa9.74□□□□□ -0.85
PTPA-221ENST00000440346 ZNF784Q8NCA9 323 aaPredicted RBP9.74□□□□□ -0.85
PTPA-221ENST00000440346 LTV1Q96GA3 475 aaPredicted RBP9.74□□□□□ -0.85
PTPA-221ENST00000440346 ARXQ96QS3 562 aa9.74□□□□□ -0.85
PTPA-221ENST00000440346 CARD14Q9BXL6 1004 aa9.74□□□□□ -0.85
PTPA-221ENST00000440346 ITGB4P16144 1822 aa9.74□□□□□ -0.85
PTPA-221ENST00000440346 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
PTPA-221ENST00000440346 SLC27A3Q5K4L6 730 aa9.73□□□□□ -0.85
PTPA-221ENST00000440346 DDX54Q8TDD1 881 aaKnown RBP9.73□□□□□ -0.85
PTPA-221ENST00000440346 KNSTRNQ9Y448 316 aa9.73□□□□□ -0.85
PTPA-221ENST00000440346 PNPLA7Q6ZV29 1317 aa9.73□□□□□ -0.85
PTPA-221ENST00000440346 C5P01031 1676 aa9.73□□□□□ -0.85
PTPA-221ENST00000440346 FYB1O15117 783 aa9.72□□□□□ -0.85
PTPA-221ENST00000440346 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
PTPA-221ENST00000440346 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
PTPA-221ENST00000440346 COG3Q96JB2 828 aa9.72□□□□□ -0.85
PTPA-221ENST00000440346 TOGARAM1Q9Y4F4 1720 aa9.72□□□□□ -0.85
PTPA-221ENST00000440346 RTL1A6NKG5 1358 aa9.72□□□□□ -0.85
PTPA-221ENST00000440346 KCNQ4P56696 695 aa9.71□□□□□ -0.86
PTPA-221ENST00000440346 POLA2Q14181 598 aa9.71□□□□□ -0.86
PTPA-221ENST00000440346 ZCRB1Q8TBF4 217 aaKnown RBP9.71□□□□□ -0.86
PTPA-221ENST00000440346 PKD1L3Q7Z443 1732 aa9.7□□□□□ -0.86
PTPA-221ENST00000440346 AMPHP49418 695 aa9.7□□□□□ -0.86
PTPA-221ENST00000440346 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
PTPA-221ENST00000440346 NBPF6Q5VWK0 638 aa9.7□□□□□ -0.86
PTPA-221ENST00000440346 NBPF4Q96M43 638 aa9.7□□□□□ -0.86
PTPA-221ENST00000440346 DDX10Q13206 875 aaKnown RBP9.69□□□□□ -0.86
PTPA-221ENST00000440346 RRS1Q15050 365 aaKnown RBP9.69□□□□□ -0.86
PTPA-221ENST00000440346 UBR3Q6ZT12 1888 aa9.69□□□□□ -0.86
PTPA-221ENST00000440346 SYTL4Q96C24 671 aaPredicted RBP9.69□□□□□ -0.86
PTPA-221ENST00000440346 RBM42Q9BTD8 480 aaKnown RBP9.69□□□□□ -0.86
PTPA-221ENST00000440346 KIF24Q5T7B8 1368 aa9.68□□□□□ -0.86
PTPA-221ENST00000440346 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
PTPA-221ENST00000440346 GGNBP2Q9H3C7 697 aa9.68□□□□□ -0.86
PTPA-221ENST00000440346 TFCP2L1Q9NZI6 479 aa9.68□□□□□ -0.86
PTPA-221ENST00000440346 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
PTPA-221ENST00000440346 INSRP06213 1382 aa9.67□□□□□ -0.86
PTPA-221ENST00000440346 POLD1P28340 1107 aa9.67□□□□□ -0.86
PTPA-221ENST00000440346 NLGN2Q8NFZ4 835 aa9.67□□□□□ -0.86
PTPA-221ENST00000440346 CCNL1Q9UK58 526 aaPredicted RBP9.67□□□□□ -0.86
PTPA-221ENST00000440346 C4BP0C0L5 1744 aa9.67□□□□□ -0.86
PTPA-221ENST00000440346 NCAPD2Q15021 1401 aa9.66□□□□□ -0.86
PTPA-221ENST00000440346 GPR162Q16538 588 aa9.66□□□□□ -0.86
PTPA-221ENST00000440346 HSP90AB2PQ58FF8 381 aa9.66□□□□□ -0.86
PTPA-221ENST00000440346 COL23A1Q86Y22 540 aaPredicted RBP9.66□□□□□ -0.86
PTPA-221ENST00000440346 KLHL34Q8N239 644 aa9.66□□□□□ -0.86
PTPA-221ENST00000440346 FLT4P35916 1363 aa9.65□□□□□ -0.86
PTPA-221ENST00000440346 C1QTNF8P60827 252 aa9.65□□□□□ -0.86
PTPA-221ENST00000440346 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
PTPA-221ENST00000440346 VIRMAQ69YN4 1812 aaKnown RBP9.65□□□□□ -0.86
PTPA-221ENST00000440346 CEP350Q5VT06 3117 aa9.65□□□□□ -0.87
PTPA-221ENST00000440346 PCDH11XQ9BZA7 1347 aa9.64□□□□□ -0.87
PTPA-221ENST00000440346 PCDH11YQ9BZA8 1340 aa9.64□□□□□ -0.87
PTPA-221ENST00000440346 CYP27B1O15528 508 aa9.64□□□□□ -0.87
PTPA-221ENST00000440346 YBX3P16989 372 aaKnown RBP eCLIP9.64□□□□□ -0.87
PTPA-221ENST00000440346 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms