RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 ANKRD24Q8TF21 1146 aa19.59■□□□□ 0.73
SMC2-204ENST00000440179 TFCP2L1Q9NZI6 479 aa19.59■□□□□ 0.73
SMC2-204ENST00000440179 ATP10DQ9P241 1426 aa19.59■□□□□ 0.73
SMC2-204ENST00000440179 CAPN15O75808 1086 aa19.58■□□□□ 0.72
SMC2-204ENST00000440179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.58■□□□□ 0.72
SMC2-204ENST00000440179 FOXD4L1Q9NU39 408 aa19.58■□□□□ 0.72
SMC2-204ENST00000440179 GRIN3BO60391 1043 aa19.57■□□□□ 0.72
SMC2-204ENST00000440179 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
SMC2-204ENST00000440179 NME9Q86XW9 330 aa19.57■□□□□ 0.72
SMC2-204ENST00000440179 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
SMC2-204ENST00000440179 CD163L1Q9NR16 1453 aa19.56■□□□□ 0.72
SMC2-204ENST00000440179 LY75O60449 1722 aa19.56■□□□□ 0.72
SMC2-204ENST00000440179 NSD2O96028 1365 aa19.56■□□□□ 0.72
SMC2-204ENST00000440179 DDX54Q8TDD1 881 aaKnown RBP19.55■□□□□ 0.72
SMC2-204ENST00000440179 SAMD1Q6SPF0 538 aaPredicted RBP19.54■□□□□ 0.72
SMC2-204ENST00000440179 PRIM1P49642 420 aaKnown RBP19.53■□□□□ 0.72
SMC2-204ENST00000440179 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
SMC2-204ENST00000440179 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
SMC2-204ENST00000440179 DOT1LQ8TEK3 1739 aa19.53■□□□□ 0.72
SMC2-204ENST00000440179 COL23A1Q86Y22 540 aaPredicted RBP19.52■□□□□ 0.72
SMC2-204ENST00000440179 ADCY9O60503 1353 aa19.52■□□□□ 0.72
SMC2-204ENST00000440179 SYTL4Q96C24 671 aaPredicted RBP19.51■□□□□ 0.71
SMC2-204ENST00000440179 ROCK2O75116 1388 aaKnown RBP19.49■□□□□ 0.71
SMC2-204ENST00000440179 HSPA6P17066 643 aa19.49■□□□□ 0.71
SMC2-204ENST00000440179 MSL1Q68DK7 614 aa19.49■□□□□ 0.71
SMC2-204ENST00000440179 FAM208AQ9UK61 1670 aaKnown RBP19.49■□□□□ 0.71
SMC2-204ENST00000440179 IP6K1Q92551 441 aa19.48■□□□□ 0.71
SMC2-204ENST00000440179 GPBP1L1Q9HC44 474 aaPredicted RBP19.48■□□□□ 0.71
SMC2-204ENST00000440179 CCNL1Q9UK58 526 aaPredicted RBP19.48■□□□□ 0.71
SMC2-204ENST00000440179 EDC4Q6P2E9 1401 aaKnown RBP19.46■□□□□ 0.71
SMC2-204ENST00000440179 LTV1Q96GA3 475 aaPredicted RBP19.46■□□□□ 0.71
SMC2-204ENST00000440179 CD2APQ9Y5K6 639 aa19.45■□□□□ 0.7
SMC2-204ENST00000440179 MEGF6O75095 1541 aa19.45■□□□□ 0.7
SMC2-204ENST00000440179 ZNF526Q8TF50 670 aaPredicted RBP19.44■□□□□ 0.7
SMC2-204ENST00000440179 ZCRB1Q8TBF4 217 aaKnown RBP19.43■□□□□ 0.7
SMC2-204ENST00000440179 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
SMC2-204ENST00000440179 A0A1W2PP64 1363 aa19.42■□□□□ 0.7
SMC2-204ENST00000440179 USP47Q96K76 1375 aa19.42■□□□□ 0.7
SMC2-204ENST00000440179 RGPD2P0DJD1 1756 aa19.42■□□□□ 0.7
SMC2-204ENST00000440179 C5P01031 1676 aa19.41■□□□□ 0.7
SMC2-204ENST00000440179 ZBTB22O15209 634 aa19.41■□□□□ 0.7
SMC2-204ENST00000440179 HDGFL2Q7Z4V5 671 aaPredicted RBP19.41■□□□□ 0.7
SMC2-204ENST00000440179 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
SMC2-204ENST00000440179 MAP3K19Q56UN5 1328 aa19.4■□□□□ 0.7
SMC2-204ENST00000440179 HOXC9P31274 260 aa19.39■□□□□ 0.69
SMC2-204ENST00000440179 KIF3CO14782 793 aa19.38■□□□□ 0.69
SMC2-204ENST00000440179 AMIGO3Q86WK7 504 aa19.38■□□□□ 0.69
SMC2-204ENST00000440179 FBLN1P23142 703 aa19.37■□□□□ 0.69
SMC2-204ENST00000440179 SIN3AQ96ST3 1273 aa19.37■□□□□ 0.69
SMC2-204ENST00000440179 TAF1LQ8IZX4 1826 aa19.37■□□□□ 0.69
SMC2-204ENST00000440179 DSG3P32926 999 aa19.36■□□□□ 0.69
SMC2-204ENST00000440179 TERF2IPQ9NYB0 399 aa19.36■□□□□ 0.69
SMC2-204ENST00000440179 TOGARAM1Q9Y4F4 1720 aa19.36■□□□□ 0.69
SMC2-204ENST00000440179 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
SMC2-204ENST00000440179 FLAD1Q8NFF5 587 aa19.35■□□□□ 0.69
SMC2-204ENST00000440179 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
SMC2-204ENST00000440179 WWC3Q9ULE0 1092 aa19.35■□□□□ 0.69
SMC2-204ENST00000440179 PALLDQ8WX93 1383 aa19.34■□□□□ 0.69
SMC2-204ENST00000440179 NBPF6Q5VWK0 638 aa19.34■□□□□ 0.69
SMC2-204ENST00000440179 NBPF4Q96M43 638 aa19.34■□□□□ 0.69
SMC2-204ENST00000440179 PCNTO95613 3336 aa19.33■□□□□ 0.69
SMC2-204ENST00000440179 AMPHP49418 695 aa19.33■□□□□ 0.68
SMC2-204ENST00000440179 C4BP0C0L5 1744 aa19.33■□□□□ 0.68
SMC2-204ENST00000440179 SMIM5Q71RC9 77 aa19.32■□□□□ 0.68
SMC2-204ENST00000440179 USHBP1Q8N6Y0 703 aa19.32■□□□□ 0.68
SMC2-204ENST00000440179 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
SMC2-204ENST00000440179 CGNL1Q0VF96 1302 aa19.31■□□□□ 0.68
SMC2-204ENST00000440179 COG3Q96JB2 828 aa19.31■□□□□ 0.68
SMC2-204ENST00000440179 RTL1A6NKG5 1358 aa19.31■□□□□ 0.68
SMC2-204ENST00000440179 UBR3Q6ZT12 1888 aa19.31■□□□□ 0.68
SMC2-204ENST00000440179 DNAJC5GQ8N7S2 189 aa19.3■□□□□ 0.68
SMC2-204ENST00000440179 APLP1P51693 650 aa19.29■□□□□ 0.68
SMC2-204ENST00000440179 PUS7Q96PZ0 661 aaKnown RBP19.29■□□□□ 0.68
SMC2-204ENST00000440179 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
SMC2-204ENST00000440179 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
SMC2-204ENST00000440179 RAPGEF4Q8WZA2 1011 aa19.28■□□□□ 0.68
SMC2-204ENST00000440179 AK7Q96M32 723 aa19.28■□□□□ 0.68
SMC2-204ENST00000440179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.27■□□□□ 0.68
SMC2-204ENST00000440179 PHF14O94880 888 aa19.27■□□□□ 0.68
SMC2-204ENST00000440179 RRS1Q15050 365 aaKnown RBP19.27■□□□□ 0.68
SMC2-204ENST00000440179 MPRIPQ6WCQ1 1025 aa19.27■□□□□ 0.68
SMC2-204ENST00000440179 PCDH11XQ9BZA7 1347 aa19.26■□□□□ 0.67
SMC2-204ENST00000440179 PCDH11YQ9BZA8 1340 aa19.26■□□□□ 0.67
SMC2-204ENST00000440179 CYP27B1O15528 508 aa19.26■□□□□ 0.67
SMC2-204ENST00000440179 HMGB2P26583 209 aaKnown RBP19.26■□□□□ 0.67
SMC2-204ENST00000440179 ITGB4P16144 1822 aa19.25■□□□□ 0.67
SMC2-204ENST00000440179 MAP2P11137 1827 aaKnown RBP19.24■□□□□ 0.67
SMC2-204ENST00000440179 TATP17735 454 aaPredicted RBP19.24■□□□□ 0.67
SMC2-204ENST00000440179 NSD3Q9BZ95 1437 aa19.24■□□□□ 0.67
SMC2-204ENST00000440179 PXDNLA1KZ92 1463 aa19.23■□□□□ 0.67
SMC2-204ENST00000440179 KIAA1551Q9HCM1 1747 aa19.23■□□□□ 0.67
SMC2-204ENST00000440179 SSFA2P28290 1259 aa19.23■□□□□ 0.67
SMC2-204ENST00000440179 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
SMC2-204ENST00000440179 TOMM70O94826 608 aa19.22■□□□□ 0.67
SMC2-204ENST00000440179 LINC00116Q8NCU8 138 aa19.22■□□□□ 0.67
SMC2-204ENST00000440179 PIGBQ92521 554 aa19.22■□□□□ 0.67
SMC2-204ENST00000440179 SMG6Q86US8 1419 aaKnown RBP19.22■□□□□ 0.67
SMC2-204ENST00000440179 HSP90AB2PQ58FF8 381 aa19.21■□□□□ 0.67
SMC2-204ENST00000440179 TESK2Q96S53 571 aa19.21■□□□□ 0.67
SMC2-204ENST00000440179 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms