RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
CCBE1-202ENST00000439986 ANKRD13AQ8IZ07 590 aa13.69□□□□□ -0.22
CCBE1-202ENST00000439986 ERC2O15083 957 aa13.69□□□□□ -0.22
CCBE1-202ENST00000439986 TNPO1Q92973 898 aaKnown RBP13.69□□□□□ -0.22
CCBE1-202ENST00000439986 SEPT11Q9NVA2 429 aaKnown RBP13.69□□□□□ -0.22
CCBE1-202ENST00000439986 GOLGA6L10A0A0M3HER8 536 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 GOLGA6L10A6NI86 522 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 CCDC181Q5TID7 509 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 OLFM4Q6UX06 510 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.68□□□□□ -0.22
CCBE1-202ENST00000439986 KIAA0586Q9BVV6 1533 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 DHX29Q7Z478 1369 aaKnown RBP13.68□□□□□ -0.22
CCBE1-202ENST00000439986 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 FIBPO43427 364 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 WDHD1O75717 1129 aaPredicted RBP13.68□□□□□ -0.22
CCBE1-202ENST00000439986 UQCRHP07919 91 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 GTF2A1P52655 376 aaPredicted RBP13.68□□□□□ -0.22
CCBE1-202ENST00000439986 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 ARHGEF11O15085 1522 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 SLMAPQ14BN4 828 aa13.68□□□□□ -0.22
CCBE1-202ENST00000439986 PARD3Q8TEW0 1356 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 POLD1P28340 1107 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 SMC2O95347 1197 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 ATF3P18847 181 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 OFD1O75665 1012 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 UBTFL1P0CB47 393 aaPredicted RBP13.67□□□□□ -0.22
CCBE1-202ENST00000439986 FMNL2Q96PY5 1086 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 STRN4Q9NRL3 753 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 LCA5Q86VQ0 697 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
CCBE1-202ENST00000439986 LETM1O95202 739 aaPredicted RBP13.66□□□□□ -0.22
CCBE1-202ENST00000439986 GNAI3P08754 354 aa13.66□□□□□ -0.22
CCBE1-202ENST00000439986 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
CCBE1-202ENST00000439986 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
CCBE1-202ENST00000439986 UGGT2Q9NYU1 1516 aa13.66□□□□□ -0.22
CCBE1-202ENST00000439986 STK3Q13188 491 aa13.66□□□□□ -0.22
CCBE1-202ENST00000439986 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
CCBE1-202ENST00000439986 SSFA2P28290 1259 aa13.65□□□□□ -0.22
CCBE1-202ENST00000439986 SURF6O75683 361 aaKnown RBP13.65□□□□□ -0.22
CCBE1-202ENST00000439986 XRCC6P12956 609 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCBE1-202ENST00000439986 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
CCBE1-202ENST00000439986 TRIM27P14373 513 aa13.65□□□□□ -0.23
CCBE1-202ENST00000439986 PLB1Q6P1J6 1458 aa13.64□□□□□ -0.23
CCBE1-202ENST00000439986 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
CCBE1-202ENST00000439986 SYCE3A1L190 88 aa13.64□□□□□ -0.23
CCBE1-202ENST00000439986 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
CCBE1-202ENST00000439986 CCAR1Q8IX12 1150 aaKnown RBP13.64□□□□□ -0.23
CCBE1-202ENST00000439986 UIMC1Q96RL1 719 aa13.64□□□□□ -0.23
CCBE1-202ENST00000439986 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
CCBE1-202ENST00000439986 TRIM5Q9C035 493 aa13.64□□□□□ -0.23
CCBE1-202ENST00000439986 SPC24Q8NBT2 197 aa13.64□□□□□ -0.23
CCBE1-202ENST00000439986 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
CCBE1-202ENST00000439986 CABP1Q9NZU7 370 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 CNTROBQ8N137 903 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 CDK5RAP3Q96JB5 506 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 WDR33Q9C0J8 1336 aaKnown RBP13.63□□□□□ -0.23
CCBE1-202ENST00000439986 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-202ENST00000439986 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-202ENST00000439986 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-202ENST00000439986 IGSF3O75054 1194 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 GNAI2P04899 355 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 LEKR1Q6ZMV7 388 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-202ENST00000439986 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 PANK2Q9BZ23 570 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 SIL1Q9H173 461 aa13.63□□□□□ -0.23
CCBE1-202ENST00000439986 ZRANB2O95218 330 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCBE1-202ENST00000439986 CCDC175P0C221 793 aa13.62□□□□□ -0.23
CCBE1-202ENST00000439986 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
CCBE1-202ENST00000439986 FCHSD2O94868 740 aa13.62□□□□□ -0.23
CCBE1-202ENST00000439986 KRT18P05783 430 aaKnown RBP13.62□□□□□ -0.23
CCBE1-202ENST00000439986 SDF4Q9BRK5 362 aa13.62□□□□□ -0.23
CCBE1-202ENST00000439986 ZHX3Q9H4I2 956 aa13.62□□□□□ -0.23
CCBE1-202ENST00000439986 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
CCBE1-202ENST00000439986 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
CCBE1-202ENST00000439986 FAM177A1Q8N128 213 aaPredicted RBP13.62□□□□□ -0.23
CCBE1-202ENST00000439986 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
CCBE1-202ENST00000439986 ENOX2Q16206 610 aaKnown RBP13.61□□□□□ -0.23
CCBE1-202ENST00000439986 CLCN1P35523 988 aa13.61□□□□□ -0.23
CCBE1-202ENST00000439986 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
CCBE1-202ENST00000439986 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
CCBE1-202ENST00000439986 RPAP2Q8IXW5 612 aaPredicted RBP13.6□□□□□ -0.23
CCBE1-202ENST00000439986 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
CCBE1-202ENST00000439986 PIBF1Q8WXW3 757 aa13.6□□□□□ -0.23
CCBE1-202ENST00000439986 GBP2P32456 591 aaPredicted RBP13.6□□□□□ -0.23
CCBE1-202ENST00000439986 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
CCBE1-202ENST00000439986 CPSF2Q9P2I0 782 aaKnown RBP13.6□□□□□ -0.23
CCBE1-202ENST00000439986 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
CCBE1-202ENST00000439986 RBM5P52756 815 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCBE1-202ENST00000439986 SULT6B1Q6IMI4 303 aa13.6□□□□□ -0.23
CCBE1-202ENST00000439986 CNNM1Q9NRU3 951 aa13.6□□□□□ -0.23
CCBE1-202ENST00000439986 PLEKHH1Q9ULM0 1364 aa13.6□□□□□ -0.23
CCBE1-202ENST00000439986 XBP1P17861 261 aa13.6□□□□□ -0.23
CCBE1-202ENST00000439986 XPCQ01831 940 aaPredicted RBP13.6□□□□□ -0.23
CCBE1-202ENST00000439986 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
CCBE1-202ENST00000439986 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
CCBE1-202ENST00000439986 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms