RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 RBM19Q9Y4C8 960 aaKnown RBP19.21■□□□□ 0.67
CPSF7-205ENST00000439958 VAMP4O75379 141 aa19.21■□□□□ 0.67
CPSF7-205ENST00000439958 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
CPSF7-205ENST00000439958 TEFQ10587 303 aa19.2■□□□□ 0.66
CPSF7-205ENST00000439958 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
CPSF7-205ENST00000439958 NPM2Q86SE8 214 aaKnown RBP19.19■□□□□ 0.66
CPSF7-205ENST00000439958 KIF16BQ96L93 1317 aa19.19■□□□□ 0.66
CPSF7-205ENST00000439958 EIF2S2P20042 333 aaKnown RBP19.18■□□□□ 0.66
CPSF7-205ENST00000439958 CT47B1P0C2W7 299 aaPredicted RBP19.18■□□□□ 0.66
CPSF7-205ENST00000439958 SLC4A10Q6U841 1118 aa19.18■□□□□ 0.66
CPSF7-205ENST00000439958 LGR6Q9HBX8 967 aa19.18■□□□□ 0.66
CPSF7-205ENST00000439958 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
CPSF7-205ENST00000439958 PLEKHO1Q53GL0 409 aaPredicted RBP19.17■□□□□ 0.66
CPSF7-205ENST00000439958 C1orf115Q9H7X2 142 aa19.17■□□□□ 0.66
CPSF7-205ENST00000439958 KIAA0232Q92628 1395 aa19.17■□□□□ 0.66
CPSF7-205ENST00000439958 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
CPSF7-205ENST00000439958 IL17REQ8NFR9 667 aa19.17■□□□□ 0.66
CPSF7-205ENST00000439958 NWD1Q149M9 1564 aa19.16■□□□□ 0.66
CPSF7-205ENST00000439958 EVA1CP58658 441 aa19.16■□□□□ 0.66
CPSF7-205ENST00000439958 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
CPSF7-205ENST00000439958 STRCP1A6NGW2 1772 aa19.16■□□□□ 0.66
CPSF7-205ENST00000439958 MS4A1P11836 297 aa19.16■□□□□ 0.66
CPSF7-205ENST00000439958 IGHDP01880 384 aa19.15■□□□□ 0.66
CPSF7-205ENST00000439958 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
CPSF7-205ENST00000439958 SPATA31A3Q5VYP0 1347 aa19.15■□□□□ 0.66
CPSF7-205ENST00000439958 A0A0G2JS52 829 aa19.15■□□□□ 0.66
CPSF7-205ENST00000439958 ZNF853P0CG23 659 aa19.15■□□□□ 0.66
CPSF7-205ENST00000439958 CHL1O00533 1208 aa19.14■□□□□ 0.66
CPSF7-205ENST00000439958 CENPQQ7L2Z9 268 aaPredicted RBP19.14■□□□□ 0.66
CPSF7-205ENST00000439958 PCDHB15Q9Y5E8 787 aa19.13■□□□□ 0.65
CPSF7-205ENST00000439958 RTL1A6NKG5 1358 aa19.13■□□□□ 0.65
CPSF7-205ENST00000439958 MAP3K5Q99683 1374 aa19.13■□□□□ 0.65
CPSF7-205ENST00000439958 STK31Q9BXU1 1019 aa19.13■□□□□ 0.65
CPSF7-205ENST00000439958 ERBB3P21860 1342 aa19.13■□□□□ 0.65
CPSF7-205ENST00000439958 KDRP35968 1356 aa19.13■□□□□ 0.65
CPSF7-205ENST00000439958 ALDH1L2Q3SY69 923 aa19.12■□□□□ 0.65
CPSF7-205ENST00000439958 MRPL50Q8N5N7 158 aaKnown RBP19.12■□□□□ 0.65
CPSF7-205ENST00000439958 DDX19BQ9UMR2 479 aa19.12■□□□□ 0.65
CPSF7-205ENST00000439958 TATP17735 454 aaPredicted RBP19.11■□□□□ 0.65
CPSF7-205ENST00000439958 TAF7Q15545 349 aaPredicted RBP19.11■□□□□ 0.65
CPSF7-205ENST00000439958 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
CPSF7-205ENST00000439958 USP19O94966 1318 aa19.11■□□□□ 0.65
CPSF7-205ENST00000439958 TNS3Q68CZ2 1445 aa19.1■□□□□ 0.65
CPSF7-205ENST00000439958 F6X3S4 739 aa19.1■□□□□ 0.65
CPSF7-205ENST00000439958 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
CPSF7-205ENST00000439958 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
CPSF7-205ENST00000439958 BTBD11A6QL63 1104 aa19.09■□□□□ 0.65
CPSF7-205ENST00000439958 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
CPSF7-205ENST00000439958 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
CPSF7-205ENST00000439958 DCCP43146 1447 aa19.09■□□□□ 0.65
CPSF7-205ENST00000439958 KCNQ3O43525 872 aa19.09■□□□□ 0.65
CPSF7-205ENST00000439958 ADAMTS2O95450 1211 aa19.09■□□□□ 0.65
CPSF7-205ENST00000439958 FKBP5Q13451 457 aaPredicted RBP19.08■□□□□ 0.65
CPSF7-205ENST00000439958 DDX54Q8TDD1 881 aaKnown RBP19.08■□□□□ 0.65
CPSF7-205ENST00000439958 STRCQ7RTU9 1775 aa19.08■□□□□ 0.65
CPSF7-205ENST00000439958 LTN1O94822 1766 aa19.08■□□□□ 0.64
CPSF7-205ENST00000439958 ANXA1P04083 346 aa19.08■□□□□ 0.64
CPSF7-205ENST00000439958 NFAT5O94916 1531 aa19.08■□□□□ 0.64
CPSF7-205ENST00000439958 DLG5Q8TDM6 1919 aa19.07■□□□□ 0.64
CPSF7-205ENST00000439958 APBB1O00213 710 aa19.07■□□□□ 0.64
CPSF7-205ENST00000439958 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
CPSF7-205ENST00000439958 HDGFL1Q5TGJ6 251 aa19.07■□□□□ 0.64
CPSF7-205ENST00000439958 RWDD1Q9H446 243 aaPredicted RBP19.07■□□□□ 0.64
CPSF7-205ENST00000439958 G2E3Q7L622 706 aa19.06■□□□□ 0.64
CPSF7-205ENST00000439958 SLC39A6Q13433 755 aa19.06■□□□□ 0.64
CPSF7-205ENST00000439958 AKAP4Q5JQC9 854 aa19.06■□□□□ 0.64
CPSF7-205ENST00000439958 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
CPSF7-205ENST00000439958 NCOA3Q9Y6Q9 1424 aa19.04■□□□□ 0.64
CPSF7-205ENST00000439958 CRB1P82279 1406 aa19.03■□□□□ 0.64
CPSF7-205ENST00000439958 SPG7Q9UQ90 795 aa19.03■□□□□ 0.64
CPSF7-205ENST00000439958 CCDC9Q9Y3X0 531 aaKnown RBP19.03■□□□□ 0.64
CPSF7-205ENST00000439958 KAT6BQ8WYB5 2073 aa19.02■□□□□ 0.64
CPSF7-205ENST00000439958 HTATSF1O43719 755 aaKnown RBP19.02■□□□□ 0.64
CPSF7-205ENST00000439958 CCDC30Q5VVM6 783 aa19.02■□□□□ 0.64
CPSF7-205ENST00000439958 KDM2BQ8NHM5 1336 aa19.02■□□□□ 0.64
CPSF7-205ENST00000439958 RNMTO43148 476 aaKnown RBP19.02■□□□□ 0.64
CPSF7-205ENST00000439958 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
CPSF7-205ENST00000439958 NFATC2IPQ8NCF5 419 aa19.01■□□□□ 0.63
CPSF7-205ENST00000439958 BTG4Q9NY30 223 aa19.01■□□□□ 0.63
CPSF7-205ENST00000439958 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
CPSF7-205ENST00000439958 SOS2Q07890 1332 aaPredicted RBP19.01■□□□□ 0.63
CPSF7-205ENST00000439958 PDE4AP27815 886 aa19■□□□□ 0.63
CPSF7-205ENST00000439958 MARF1Q9Y4F3 1742 aaKnown RBP18.99■□□□□ 0.63
CPSF7-205ENST00000439958 MED1Q15648 1581 aaPredicted RBP18.99■□□□□ 0.63
CPSF7-205ENST00000439958 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
CPSF7-205ENST00000439958 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
CPSF7-205ENST00000439958 PDZRN3Q9UPQ7 1066 aa18.99■□□□□ 0.63
CPSF7-205ENST00000439958 PRAMEF22A3QJZ6 481 aa18.98■□□□□ 0.63
CPSF7-205ENST00000439958 PIP4K2AP48426 406 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-205ENST00000439958 FLIIQ13045 1269 aa18.98■□□□□ 0.63
CPSF7-205ENST00000439958 PHAXQ9H814 394 aaKnown RBP18.98■□□□□ 0.63
CPSF7-205ENST00000439958 PXDNQ92626 1479 aa18.98■□□□□ 0.63
CPSF7-205ENST00000439958 UBAP1LF5GYI3 381 aa18.97■□□□□ 0.63
CPSF7-205ENST00000439958 RGPD2P0DJD1 1756 aa18.97■□□□□ 0.63
CPSF7-205ENST00000439958 IFNL2Q8IZJ0 200 aa18.97■□□□□ 0.63
CPSF7-205ENST00000439958 TTC5Q8N0Z6 440 aa18.97■□□□□ 0.63
CPSF7-205ENST00000439958 LNPKQ9C0E8 428 aa18.97■□□□□ 0.63
CPSF7-205ENST00000439958 ZBTB40Q9NUA8 1239 aa18.97■□□□□ 0.63
CPSF7-205ENST00000439958 CHPF2Q9P2E5 772 aa18.97■□□□□ 0.63
CPSF7-205ENST00000439958 ZBTB47Q9UFB7 747 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms