RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CAMTA1Q9Y6Y1 1673 aa15.03■□□□□ -0
SMAD3-202ENST00000439724 HSPA2P54652 639 aa15.02■□□□□ -0
SMAD3-202ENST00000439724 RTF1Q92541 710 aaKnown RBP15.02■□□□□ -0
SMAD3-202ENST00000439724 NCAPD2Q15021 1401 aa15.02■□□□□ -0
SMAD3-202ENST00000439724 PDE4AP27815 886 aa15.02□□□□□ -0.01
SMAD3-202ENST00000439724 ARHGEF25Q86VW2 580 aa15.02□□□□□ -0.01
SMAD3-202ENST00000439724 TMEM57Q8N5G2 664 aa15.02□□□□□ -0.01
SMAD3-202ENST00000439724 BACH2Q9BYV9 841 aa15.02□□□□□ -0.01
SMAD3-202ENST00000439724 MSH6P52701 1360 aa15.01□□□□□ -0.01
SMAD3-202ENST00000439724 RGPD2P0DJD1 1756 aa15.01□□□□□ -0.01
SMAD3-202ENST00000439724 GCP02774 474 aa15.01□□□□□ -0.01
SMAD3-202ENST00000439724 XPCQ01831 940 aaPredicted RBP15.01□□□□□ -0.01
SMAD3-202ENST00000439724 SKAP1Q86WV1 359 aa15.01□□□□□ -0.01
SMAD3-202ENST00000439724 ITPRIPQ8IWB1 547 aa15.01□□□□□ -0.01
SMAD3-202ENST00000439724 MAP3K5Q99683 1374 aa15□□□□□ -0.01
SMAD3-202ENST00000439724 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
SMAD3-202ENST00000439724 CADPS2Q86UW7 1296 aa15□□□□□ -0.01
SMAD3-202ENST00000439724 LTV1Q96GA3 475 aaPredicted RBP15□□□□□ -0.01
SMAD3-202ENST00000439724 RWDD1Q9H446 243 aaPredicted RBP15□□□□□ -0.01
SMAD3-202ENST00000439724 MED1Q15648 1581 aaPredicted RBP15□□□□□ -0.01
SMAD3-202ENST00000439724 GNAT3A8MTJ3 354 aa14.99□□□□□ -0.01
SMAD3-202ENST00000439724 ELL2O00472 640 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-202ENST00000439724 ABCC4O15439 1325 aa14.99□□□□□ -0.01
SMAD3-202ENST00000439724 CHMP4BQ9H444 224 aaKnown RBP14.98□□□□□ -0.01
SMAD3-202ENST00000439724 ZBTB40Q9NUA8 1239 aa14.98□□□□□ -0.01
SMAD3-202ENST00000439724 LMO7Q8WWI1 1683 aa14.97□□□□□ -0.01
SMAD3-202ENST00000439724 HDAC1Q13547 482 aaPredicted RBP14.97□□□□□ -0.01
SMAD3-202ENST00000439724 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
SMAD3-202ENST00000439724 NBPF6Q5VWK0 638 aa14.97□□□□□ -0.01
SMAD3-202ENST00000439724 NBPF4Q96M43 638 aa14.97□□□□□ -0.01
SMAD3-202ENST00000439724 BABAM1Q9NWV8 329 aa14.97□□□□□ -0.01
SMAD3-202ENST00000439724 VIRMAQ69YN4 1812 aaKnown RBP14.96□□□□□ -0.01
SMAD3-202ENST00000439724 NPHP3Q7Z494 1330 aa14.96□□□□□ -0.01
SMAD3-202ENST00000439724 CRYBG1Q9Y4K1 1723 aa14.96□□□□□ -0.01
SMAD3-202ENST00000439724 PXDNQ92626 1479 aa14.96□□□□□ -0.01
SMAD3-202ENST00000439724 ABCC6O95255 1503 aa14.96□□□□□ -0.01
SMAD3-202ENST00000439724 TSPYL4Q9UJ04 414 aa14.96□□□□□ -0.02
SMAD3-202ENST00000439724 TNS3Q68CZ2 1445 aa14.95□□□□□ -0.02
SMAD3-202ENST00000439724 RGS3P49796 1198 aa14.95□□□□□ -0.02
SMAD3-202ENST00000439724 KRT24Q2M2I5 525 aa14.95□□□□□ -0.02
SMAD3-202ENST00000439724 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
SMAD3-202ENST00000439724 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
SMAD3-202ENST00000439724 RGPD5Q99666 1765 aa14.94□□□□□ -0.02
SMAD3-202ENST00000439724 FAM161AQ3B820 660 aa14.94□□□□□ -0.02
SMAD3-202ENST00000439724 SOS1Q07889 1333 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-202ENST00000439724 CEMIPQ8WUJ3 1361 aa14.94□□□□□ -0.02
SMAD3-202ENST00000439724 RGS12O14924 1447 aa14.94□□□□□ -0.02
SMAD3-202ENST00000439724 FAM208AQ9UK61 1670 aaKnown RBP14.94□□□□□ -0.02
SMAD3-202ENST00000439724 COL18A1P39060 1754 aa14.94□□□□□ -0.02
SMAD3-202ENST00000439724 ZBTB7CA1YPR0 619 aa14.93□□□□□ -0.02
SMAD3-202ENST00000439724 ANP32AP39687 249 aaKnown RBP14.93□□□□□ -0.02
SMAD3-202ENST00000439724 IL17REQ8NFR9 667 aa14.93□□□□□ -0.02
SMAD3-202ENST00000439724 ZBTB7BO15156 539 aaPredicted RBP14.92□□□□□ -0.02
SMAD3-202ENST00000439724 PTPRCP08575 1304 aa14.92□□□□□ -0.02
SMAD3-202ENST00000439724 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
SMAD3-202ENST00000439724 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
SMAD3-202ENST00000439724 CACNA1FO60840 1977 aa14.92□□□□□ -0.02
SMAD3-202ENST00000439724 OVOS2A0A0G2JMS6 1433 aa14.92□□□□□ -0.02
SMAD3-202ENST00000439724 MSH5O43196 834 aa14.92□□□□□ -0.02
SMAD3-202ENST00000439724 C8orf34Q49A92 452 aa14.92□□□□□ -0.02
SMAD3-202ENST00000439724 LRRC59Q96AG4 307 aaKnown RBP14.92□□□□□ -0.02
SMAD3-202ENST00000439724 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
SMAD3-202ENST00000439724 KDM3BQ7LBC6 1761 aa14.91□□□□□ -0.02
SMAD3-202ENST00000439724 TAF7Q15545 349 aaPredicted RBP14.91□□□□□ -0.02
SMAD3-202ENST00000439724 AMOTQ4VCS5 1084 aa14.91□□□□□ -0.02
SMAD3-202ENST00000439724 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
SMAD3-202ENST00000439724 SMC5Q8IY18 1101 aa14.91□□□□□ -0.02
SMAD3-202ENST00000439724 ERBB3P21860 1342 aa14.9□□□□□ -0.02
SMAD3-202ENST00000439724 SPATA31A3Q5VYP0 1347 aa14.9□□□□□ -0.02
SMAD3-202ENST00000439724 INTS3Q68E01 1043 aaKnown RBP14.9□□□□□ -0.02
SMAD3-202ENST00000439724 ADAMTS7Q9UKP4 1686 aa14.89□□□□□ -0.03
SMAD3-202ENST00000439724 AKAP4Q5JQC9 854 aa14.89□□□□□ -0.03
SMAD3-202ENST00000439724 DDX17Q92841 729 aaKnown RBP14.89□□□□□ -0.03
SMAD3-202ENST00000439724 AXIN2Q9Y2T1 843 aa14.89□□□□□ -0.03
SMAD3-202ENST00000439724 PLEKHG2Q9H7P9 1386 aa14.89□□□□□ -0.03
SMAD3-202ENST00000439724 CPDO75976 1380 aa14.88□□□□□ -0.03
SMAD3-202ENST00000439724 ZNF530Q6P9A1 599 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-202ENST00000439724 BRINP3Q76B58 766 aa14.87□□□□□ -0.03
SMAD3-202ENST00000439724 N4BP2Q86UW6 1770 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-202ENST00000439724 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-202ENST00000439724 PLEKHG5O94827 1062 aa14.87□□□□□ -0.03
SMAD3-202ENST00000439724 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
SMAD3-202ENST00000439724 ZC3H6P61129 1189 aaKnown RBP14.87□□□□□ -0.03
SMAD3-202ENST00000439724 IPO9Q96P70 1041 aaKnown RBP14.87□□□□□ -0.03
SMAD3-202ENST00000439724 SIPA1L3O60292 1781 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-202ENST00000439724 CCDC30Q5VVM6 783 aa14.86□□□□□ -0.03
SMAD3-202ENST00000439724 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
SMAD3-202ENST00000439724 SOS2Q07890 1332 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-202ENST00000439724 C1orf141Q5JVX7 400 aa14.84□□□□□ -0.03
SMAD3-202ENST00000439724 RNMTO43148 476 aaKnown RBP14.83□□□□□ -0.04
SMAD3-202ENST00000439724 HOXB7P09629 217 aa14.83□□□□□ -0.04
SMAD3-202ENST00000439724 GCC1Q96CN9 775 aa14.83□□□□□ -0.04
SMAD3-202ENST00000439724 LGR6Q9HBX8 967 aa14.83□□□□□ -0.04
SMAD3-202ENST00000439724 ABCA3Q99758 1704 aa14.83□□□□□ -0.04
SMAD3-202ENST00000439724 NHSL1Q5SYE7 1610 aa14.83□□□□□ -0.04
SMAD3-202ENST00000439724 NUCB1Q02818 461 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 G2E3Q7L622 706 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 SLAIN2Q9P270 581 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 PXDNLA1KZ92 1463 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 ATP10DQ9P241 1426 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms