RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 HOXC9P31274 260 aa15.95■□□□□ 0.14
GTF3C5-206ENST00000439697 RTL1A6NKG5 1358 aa15.95■□□□□ 0.14
GTF3C5-206ENST00000439697 CHD4Q14839 1912 aa15.95■□□□□ 0.14
GTF3C5-206ENST00000439697 NSD3Q9BZ95 1437 aa15.94■□□□□ 0.14
GTF3C5-206ENST00000439697 NLRP2Q9NX02 1062 aa15.94■□□□□ 0.14
GTF3C5-206ENST00000439697 KIF20BQ96Q89 1820 aa15.94■□□□□ 0.14
GTF3C5-206ENST00000439697 FAM208AQ9UK61 1670 aaKnown RBP15.93■□□□□ 0.14
GTF3C5-206ENST00000439697 PAPPAQ13219 1627 aa15.93■□□□□ 0.14
GTF3C5-206ENST00000439697 KIF24Q5T7B8 1368 aa15.92■□□□□ 0.14
GTF3C5-206ENST00000439697 MAP3K5Q99683 1374 aa15.92■□□□□ 0.14
GTF3C5-206ENST00000439697 IL2RBP14784 551 aa15.92■□□□□ 0.14
GTF3C5-206ENST00000439697 RRS1Q15050 365 aaKnown RBP15.92■□□□□ 0.14
GTF3C5-206ENST00000439697 LRRC4BQ9NT99 713 aa15.92■□□□□ 0.14
GTF3C5-206ENST00000439697 NHSQ6T4R5 1651 aa15.91■□□□□ 0.14
GTF3C5-206ENST00000439697 AMPHP49418 695 aa15.9■□□□□ 0.14
GTF3C5-206ENST00000439697 NLGN2Q8NFZ4 835 aa15.9■□□□□ 0.14
GTF3C5-206ENST00000439697 INSRP06213 1382 aa15.88■□□□□ 0.13
GTF3C5-206ENST00000439697 KCNQ4P56696 695 aa15.88■□□□□ 0.13
GTF3C5-206ENST00000439697 LTV1Q96GA3 475 aaPredicted RBP15.88■□□□□ 0.13
GTF3C5-206ENST00000439697 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
GTF3C5-206ENST00000439697 FLT4P35916 1363 aa15.87■□□□□ 0.13
GTF3C5-206ENST00000439697 SHANK3Q9BYB0 1731 aa15.87■□□□□ 0.13
GTF3C5-206ENST00000439697 ANKRD26Q9UPS8 1709 aa15.87■□□□□ 0.13
GTF3C5-206ENST00000439697 HSP90AB2PQ58FF8 381 aa15.86■□□□□ 0.13
GTF3C5-206ENST00000439697 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
GTF3C5-206ENST00000439697 AKT1S1Q96B36 256 aa15.86■□□□□ 0.13
GTF3C5-206ENST00000439697 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
GTF3C5-206ENST00000439697 PNPLA7Q6ZV29 1317 aa15.86■□□□□ 0.13
GTF3C5-206ENST00000439697 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
GTF3C5-206ENST00000439697 BTAF1O14981 1849 aa15.85■□□□□ 0.13
GTF3C5-206ENST00000439697 MEGF6O75095 1541 aa15.85■□□□□ 0.13
GTF3C5-206ENST00000439697 YBX3P16989 372 aaKnown RBP eCLIP15.85■□□□□ 0.132e-7■□□□□ 9.4
GTF3C5-206ENST00000439697 POLD1P28340 1107 aa15.85■□□□□ 0.13
GTF3C5-206ENST00000439697 PANK3Q9H999 370 aa15.84■□□□□ 0.13
GTF3C5-206ENST00000439697 EMILIN1Q9Y6C2 1016 aa15.84■□□□□ 0.13
GTF3C5-206ENST00000439697 NCAPD2Q15021 1401 aa15.84■□□□□ 0.13
GTF3C5-206ENST00000439697 POLR3GLQ9BT43 218 aa15.83■□□□□ 0.12
GTF3C5-206ENST00000439697 SMG6Q86US8 1419 aaKnown RBP15.83■□□□□ 0.12
GTF3C5-206ENST00000439697 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
GTF3C5-206ENST00000439697 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
GTF3C5-206ENST00000439697 NSD2O96028 1365 aa15.81■□□□□ 0.12
GTF3C5-206ENST00000439697 TFCP2L1Q9NZI6 479 aa15.81■□□□□ 0.12
GTF3C5-206ENST00000439697 KIF7Q2M1P5 1343 aa15.8■□□□□ 0.12
GTF3C5-206ENST00000439697 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
GTF3C5-206ENST00000439697 DDX54Q8TDD1 881 aaKnown RBP15.8■□□□□ 0.12
GTF3C5-206ENST00000439697 SLC16A10Q8TF71 515 aa15.8■□□□□ 0.12
GTF3C5-206ENST00000439697 ATP10DQ9P241 1426 aa15.79■□□□□ 0.12
GTF3C5-206ENST00000439697 USHBP1Q8N6Y0 703 aa15.79■□□□□ 0.12
GTF3C5-206ENST00000439697 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
GTF3C5-206ENST00000439697 MAP2P11137 1827 aaKnown RBP15.78■□□□□ 0.12
GTF3C5-206ENST00000439697 MSH5O43196 834 aa15.78■□□□□ 0.12
GTF3C5-206ENST00000439697 MSL1Q68DK7 614 aa15.78■□□□□ 0.12
GTF3C5-206ENST00000439697 KAT6BQ8WYB5 2073 aa15.78■□□□□ 0.12
GTF3C5-206ENST00000439697 SLC27A3Q5K4L6 730 aa15.77■□□□□ 0.12
GTF3C5-206ENST00000439697 ZNF526Q8TF50 670 aaPredicted RBP15.77■□□□□ 0.12
GTF3C5-206ENST00000439697 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.11
GTF3C5-206ENST00000439697 GRIN3BO60391 1043 aa15.76■□□□□ 0.11
GTF3C5-206ENST00000439697 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
GTF3C5-206ENST00000439697 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
GTF3C5-206ENST00000439697 RAPGEF4Q8WZA2 1011 aa15.76■□□□□ 0.11
GTF3C5-206ENST00000439697 COL24A1Q17RW2 1714 aa15.75■□□□□ 0.11
GTF3C5-206ENST00000439697 EYA1Q99502 592 aa15.75■□□□□ 0.11
GTF3C5-206ENST00000439697 PPM1GO15355 546 aaPredicted RBP15.74■□□□□ 0.11
GTF3C5-206ENST00000439697 PER1O15534 1290 aaPredicted RBP15.74■□□□□ 0.11
GTF3C5-206ENST00000439697 TATP17735 454 aaPredicted RBP15.74■□□□□ 0.11
GTF3C5-206ENST00000439697 COL23A1Q86Y22 540 aaPredicted RBP15.74■□□□□ 0.11
GTF3C5-206ENST00000439697 WWC3Q9ULE0 1092 aa15.74■□□□□ 0.11
GTF3C5-206ENST00000439697 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
GTF3C5-206ENST00000439697 PKD1L3Q7Z443 1732 aa15.74■□□□□ 0.11
GTF3C5-206ENST00000439697 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
GTF3C5-206ENST00000439697 EIF4A2Q14240 407 aaKnown RBP15.73■□□□□ 0.11
GTF3C5-206ENST00000439697 GPBP1L1Q9HC44 474 aaPredicted RBP15.73■□□□□ 0.11
GTF3C5-206ENST00000439697 KNSTRNQ9Y448 316 aa15.73■□□□□ 0.11
GTF3C5-206ENST00000439697 DOT1LQ8TEK3 1739 aa15.73■□□□□ 0.11
GTF3C5-206ENST00000439697 PLEKHG2Q9H7P9 1386 aa15.73■□□□□ 0.11
GTF3C5-206ENST00000439697 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
GTF3C5-206ENST00000439697 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
GTF3C5-206ENST00000439697 CYP27B1O15528 508 aa15.72■□□□□ 0.11
GTF3C5-206ENST00000439697 CCNL1Q9UK58 526 aaPredicted RBP15.72■□□□□ 0.11
GTF3C5-206ENST00000439697 HSPA6P17066 643 aa15.71■□□□□ 0.11
GTF3C5-206ENST00000439697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.119e-6■□□□□ 9.4
GTF3C5-206ENST00000439697 IGSF1Q8N6C5 1336 aa15.7■□□□□ 0.1
GTF3C5-206ENST00000439697 NKX1-1Q15270 411 aaPredicted RBP15.7■□□□□ 0.1
GTF3C5-206ENST00000439697 MORC1Q86VD1 984 aa15.7■□□□□ 0.1
GTF3C5-206ENST00000439697 LY75O60449 1722 aa15.68■□□□□ 0.1
GTF3C5-206ENST00000439697 ADCY9O60503 1353 aa15.68■□□□□ 0.1
GTF3C5-206ENST00000439697 NPC1L1Q9UHC9 1359 aa15.67■□□□□ 0.1
GTF3C5-206ENST00000439697 TOGARAM1Q9Y4F4 1720 aa15.67■□□□□ 0.1
GTF3C5-206ENST00000439697 SMIM5Q71RC9 77 aa15.66■□□□□ 0.1
GTF3C5-206ENST00000439697 SPG7Q9UQ90 795 aa15.66■□□□□ 0.1
GTF3C5-206ENST00000439697 KDRP35968 1356 aa15.64■□□□□ 0.09
GTF3C5-206ENST00000439697 PHKG2P15735 406 aa15.64■□□□□ 0.09
GTF3C5-206ENST00000439697 IL13P35225 146 aa15.64■□□□□ 0.09
GTF3C5-206ENST00000439697 CD2APQ9Y5K6 639 aa15.64■□□□□ 0.09
GTF3C5-206ENST00000439697 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
GTF3C5-206ENST00000439697 KIF3CO14782 793 aa15.62■□□□□ 0.09
GTF3C5-206ENST00000439697 IFNL2Q8IZJ0 200 aa15.62■□□□□ 0.09
GTF3C5-206ENST00000439697 ITGB4P16144 1822 aa15.61■□□□□ 0.09
GTF3C5-206ENST00000439697 MTHFSP49914 203 aa15.61■□□□□ 0.09
GTF3C5-206ENST00000439697 MPRIPQ6WCQ1 1025 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms