RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 PCDH11YQ9BZA8 1340 aa17.83■□□□□ 0.44
HLA-W-207ENST00000439514 RGPD2P0DJD1 1756 aa17.83■□□□□ 0.44
HLA-W-207ENST00000439514 EZH2Q15910 746 aaKnown RBP17.82■□□□□ 0.44
HLA-W-207ENST00000439514 NBPF14Q5TI25 921 aa17.82■□□□□ 0.44
HLA-W-207ENST00000439514 DDX54Q8TDD1 881 aaKnown RBP17.82■□□□□ 0.44
HLA-W-207ENST00000439514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.44
HLA-W-207ENST00000439514 NHSQ6T4R5 1651 aa17.82■□□□□ 0.44
HLA-W-207ENST00000439514 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
HLA-W-207ENST00000439514 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
HLA-W-207ENST00000439514 HMGB2P26583 209 aaKnown RBP17.8■□□□□ 0.44
HLA-W-207ENST00000439514 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
HLA-W-207ENST00000439514 EYA1Q99502 592 aa17.8■□□□□ 0.44
HLA-W-207ENST00000439514 RREB1Q92766 1687 aa17.79■□□□□ 0.44
HLA-W-207ENST00000439514 IGSF1Q8N6C5 1336 aa17.78■□□□□ 0.44
HLA-W-207ENST00000439514 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
HLA-W-207ENST00000439514 PKD1L3Q7Z443 1732 aa17.76■□□□□ 0.43
HLA-W-207ENST00000439514 MTHFSP49914 203 aa17.75■□□□□ 0.43
HLA-W-207ENST00000439514 ACSBG1Q96GR2 724 aa17.75■□□□□ 0.43
HLA-W-207ENST00000439514 SHANK3Q9BYB0 1731 aa17.75■□□□□ 0.43
HLA-W-207ENST00000439514 KCNQ2O43526 872 aa17.74■□□□□ 0.43
HLA-W-207ENST00000439514 AMOTQ4VCS5 1084 aa17.74■□□□□ 0.43
HLA-W-207ENST00000439514 KAT6BQ8WYB5 2073 aa17.74■□□□□ 0.43
HLA-W-207ENST00000439514 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
HLA-W-207ENST00000439514 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
HLA-W-207ENST00000439514 NKX1-1Q15270 411 aaPredicted RBP17.72■□□□□ 0.43
HLA-W-207ENST00000439514 TXNRD1Q16881 649 aa17.72■□□□□ 0.43
HLA-W-207ENST00000439514 PLEKHO1Q53GL0 409 aaPredicted RBP17.72■□□□□ 0.43
HLA-W-207ENST00000439514 SLC27A3Q5K4L6 730 aa17.72■□□□□ 0.43
HLA-W-207ENST00000439514 IFNL2Q8IZJ0 200 aa17.72■□□□□ 0.43
HLA-W-207ENST00000439514 SYTL4Q96C24 671 aaPredicted RBP17.72■□□□□ 0.43
HLA-W-207ENST00000439514 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
HLA-W-207ENST00000439514 BTAF1O14981 1849 aa17.72■□□□□ 0.43
HLA-W-207ENST00000439514 KDRP35968 1356 aa17.71■□□□□ 0.43
HLA-W-207ENST00000439514 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
HLA-W-207ENST00000439514 IL13P35225 146 aa17.71■□□□□ 0.43
HLA-W-207ENST00000439514 PRIM1P49642 420 aaKnown RBP17.71■□□□□ 0.43
HLA-W-207ENST00000439514 DOT1LQ8TEK3 1739 aa17.71■□□□□ 0.43
HLA-W-207ENST00000439514 CYP27B1O15528 508 aa17.7■□□□□ 0.42
HLA-W-207ENST00000439514 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
HLA-W-207ENST00000439514 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
HLA-W-207ENST00000439514 PSDA5PKW4 1024 aaPredicted RBP17.68■□□□□ 0.42
HLA-W-207ENST00000439514 SULT6B1Q6IMI4 303 aa17.68■□□□□ 0.42
HLA-W-207ENST00000439514 SMARCC1Q92922 1105 aaPredicted RBP17.68■□□□□ 0.42
HLA-W-207ENST00000439514 STK32BQ9NY57 414 aa17.68■□□□□ 0.42
HLA-W-207ENST00000439514 PHKG2P15735 406 aa17.67■□□□□ 0.42
HLA-W-207ENST00000439514 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
HLA-W-207ENST00000439514 PROM2Q8N271 834 aa17.66■□□□□ 0.42
HLA-W-207ENST00000439514 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
HLA-W-207ENST00000439514 LRP5O75197 1615 aa17.65■□□□□ 0.42
HLA-W-207ENST00000439514 DCAF5Q96JK2 942 aa17.65■□□□□ 0.42
HLA-W-207ENST00000439514 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
HLA-W-207ENST00000439514 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
HLA-W-207ENST00000439514 ERVV-2B6SEH9 535 aa17.63■□□□□ 0.41
HLA-W-207ENST00000439514 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
HLA-W-207ENST00000439514 SLC15A2Q16348 729 aa17.63■□□□□ 0.41
HLA-W-207ENST00000439514 MPRIPQ6WCQ1 1025 aa17.63■□□□□ 0.41
HLA-W-207ENST00000439514 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
HLA-W-207ENST00000439514 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
HLA-W-207ENST00000439514 AEBP1Q8IUX7 1158 aa17.62■□□□□ 0.41
HLA-W-207ENST00000439514 LY75O60449 1722 aa17.61■□□□□ 0.41
HLA-W-207ENST00000439514 CCNL1Q9UK58 526 aaPredicted RBP17.61■□□□□ 0.41
HLA-W-207ENST00000439514 PALLDQ8WX93 1383 aa17.61■□□□□ 0.41
HLA-W-207ENST00000439514 U2SURPO15042 1029 aaKnown RBP17.6■□□□□ 0.41
HLA-W-207ENST00000439514 RALBP1Q15311 655 aa17.6■□□□□ 0.41
HLA-W-207ENST00000439514 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
HLA-W-207ENST00000439514 ANO8Q9HCE9 1232 aaPredicted RBP17.6■□□□□ 0.41
HLA-W-207ENST00000439514 PAPPAQ13219 1627 aa17.6■□□□□ 0.41
HLA-W-207ENST00000439514 ITGB4P16144 1822 aa17.59■□□□□ 0.41
HLA-W-207ENST00000439514 TOGARAM1Q9Y4F4 1720 aa17.59■□□□□ 0.41
HLA-W-207ENST00000439514 PIGBQ92521 554 aa17.59■□□□□ 0.41
HLA-W-207ENST00000439514 SPON1Q9HCB6 807 aa17.59■□□□□ 0.41
HLA-W-207ENST00000439514 HMOX1P09601 288 aa17.58■□□□□ 0.4
HLA-W-207ENST00000439514 CABP4P57796 275 aa17.57■□□□□ 0.4
HLA-W-207ENST00000439514 GAS2L2Q8NHY3 880 aa17.57■□□□□ 0.4
HLA-W-207ENST00000439514 LRRC4BQ9NT99 713 aa17.57■□□□□ 0.4
HLA-W-207ENST00000439514 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
HLA-W-207ENST00000439514 FLAD1Q8NFF5 587 aa17.55■□□□□ 0.4
HLA-W-207ENST00000439514 SLC16A10Q8TF71 515 aa17.55■□□□□ 0.4
HLA-W-207ENST00000439514 AKT1S1Q96B36 256 aa17.55■□□□□ 0.4
HLA-W-207ENST00000439514 QSER1Q2KHR3 1735 aa17.55■□□□□ 0.4
HLA-W-207ENST00000439514 CASZ1Q86V15 1759 aa17.54■□□□□ 0.4
HLA-W-207ENST00000439514 FCHSD2O94868 740 aa17.54■□□□□ 0.4
HLA-W-207ENST00000439514 NEFMP07197 916 aa17.54■□□□□ 0.4
HLA-W-207ENST00000439514 PNNQ9H307 717 aaKnown RBP17.54■□□□□ 0.4
HLA-W-207ENST00000439514 TFCP2L1Q9NZI6 479 aa17.54■□□□□ 0.4
HLA-W-207ENST00000439514 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
HLA-W-207ENST00000439514 LOC102724428A0A0B4J2F2 783 aa17.53■□□□□ 0.4
HLA-W-207ENST00000439514 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
HLA-W-207ENST00000439514 SIK1P57059 783 aa17.53■□□□□ 0.4
HLA-W-207ENST00000439514 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
HLA-W-207ENST00000439514 MTFR1LQ9H019 292 aa17.53■□□□□ 0.4
HLA-W-207ENST00000439514 C5P01031 1676 aa17.52■□□□□ 0.39
HLA-W-207ENST00000439514 ZNF827Q17R98 1081 aa17.51■□□□□ 0.39
HLA-W-207ENST00000439514 MTHFSDQ2M296 383 aaKnown RBP17.51■□□□□ 0.39
HLA-W-207ENST00000439514 PPP1R1BQ9UD71 204 aaPredicted RBP17.51■□□□□ 0.39
HLA-W-207ENST00000439514 ZNF831Q5JPB2 1677 aa17.51■□□□□ 0.39
HLA-W-207ENST00000439514 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
HLA-W-207ENST00000439514 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
HLA-W-207ENST00000439514 ATG3Q9NT62 314 aa17.5■□□□□ 0.39
HLA-W-207ENST00000439514 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms