RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
AC011228.1-201ENST00000439027 COG3Q96JB2 828 aa12.86□□□□□ -0.35
AC011228.1-201ENST00000439027 TESK2Q96S53 571 aa12.86□□□□□ -0.35
AC011228.1-201ENST00000439027 STK32BQ9NY57 414 aa12.86□□□□□ -0.35
AC011228.1-201ENST00000439027 TIMELESSQ9UNS1 1208 aa12.86□□□□□ -0.35
AC011228.1-201ENST00000439027 ABCC6O95255 1503 aa12.85□□□□□ -0.35
AC011228.1-201ENST00000439027 IP6K1Q92551 441 aa12.85□□□□□ -0.35
AC011228.1-201ENST00000439027 BCL9O00512 1426 aa12.85□□□□□ -0.35
AC011228.1-201ENST00000439027 WNK3Q9BYP7 1800 aa12.84□□□□□ -0.35
AC011228.1-201ENST00000439027 ZBTB7AO95365 584 aa12.84□□□□□ -0.35
AC011228.1-201ENST00000439027 AMPHP49418 695 aa12.84□□□□□ -0.35
AC011228.1-201ENST00000439027 TNS2Q63HR2 1409 aa12.84□□□□□ -0.35
AC011228.1-201ENST00000439027 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
AC011228.1-201ENST00000439027 FBLN1P23142 703 aa12.83□□□□□ -0.36
AC011228.1-201ENST00000439027 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
AC011228.1-201ENST00000439027 PDGFDQ9GZP0 370 aaPredicted RBP12.83□□□□□ -0.36
AC011228.1-201ENST00000439027 TMF1P82094 1093 aa12.82□□□□□ -0.36
AC011228.1-201ENST00000439027 LTN1O94822 1766 aa12.81□□□□□ -0.36
AC011228.1-201ENST00000439027 SLC15A2Q16348 729 aa12.81□□□□□ -0.36
AC011228.1-201ENST00000439027 MAP3K19Q56UN5 1328 aa12.81□□□□□ -0.36
AC011228.1-201ENST00000439027 USP54Q70EL1 1684 aa12.8□□□□□ -0.36
AC011228.1-201ENST00000439027 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
AC011228.1-201ENST00000439027 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
AC011228.1-201ENST00000439027 HOXC9P31274 260 aa12.8□□□□□ -0.36
AC011228.1-201ENST00000439027 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
AC011228.1-201ENST00000439027 USP47Q96K76 1375 aa12.8□□□□□ -0.36
AC011228.1-201ENST00000439027 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
AC011228.1-201ENST00000439027 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
AC011228.1-201ENST00000439027 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
AC011228.1-201ENST00000439027 CDCA8Q53HL2 280 aa12.78□□□□□ -0.36
AC011228.1-201ENST00000439027 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
AC011228.1-201ENST00000439027 FYB1O15117 783 aa12.77□□□□□ -0.37
AC011228.1-201ENST00000439027 YY1P25490 414 aa12.77□□□□□ -0.37
AC011228.1-201ENST00000439027 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
AC011228.1-201ENST00000439027 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
AC011228.1-201ENST00000439027 PTGER2P43116 358 aa12.76□□□□□ -0.37
AC011228.1-201ENST00000439027 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
AC011228.1-201ENST00000439027 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
AC011228.1-201ENST00000439027 NHSQ6T4R5 1651 aa12.75□□□□□ -0.37
AC011228.1-201ENST00000439027 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
AC011228.1-201ENST00000439027 LRRC4BQ9NT99 713 aa12.75□□□□□ -0.37
AC011228.1-201ENST00000439027 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
AC011228.1-201ENST00000439027 NBPF6Q5VWK0 638 aa12.74□□□□□ -0.37
AC011228.1-201ENST00000439027 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
AC011228.1-201ENST00000439027 NBPF4Q96M43 638 aa12.74□□□□□ -0.37
AC011228.1-201ENST00000439027 CASZ1Q86V15 1759 aa12.74□□□□□ -0.37
AC011228.1-201ENST00000439027 KCNQ4P56696 695 aa12.73□□□□□ -0.37
AC011228.1-201ENST00000439027 SLC27A3Q5K4L6 730 aa12.73□□□□□ -0.37
AC011228.1-201ENST00000439027 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
AC011228.1-201ENST00000439027 BTAF1O14981 1849 aa12.73□□□□□ -0.37
AC011228.1-201ENST00000439027 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
AC011228.1-201ENST00000439027 RTL1A6NKG5 1358 aa12.72□□□□□ -0.37
AC011228.1-201ENST00000439027 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
AC011228.1-201ENST00000439027 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
AC011228.1-201ENST00000439027 ARXQ96QS3 562 aa12.72□□□□□ -0.37
AC011228.1-201ENST00000439027 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
AC011228.1-201ENST00000439027 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.37
AC011228.1-201ENST00000439027 SYT17Q9BSW7 474 aa12.71□□□□□ -0.37
AC011228.1-201ENST00000439027 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.37
AC011228.1-201ENST00000439027 TFCP2L1Q9NZI6 479 aa12.71□□□□□ -0.37
AC011228.1-201ENST00000439027 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
AC011228.1-201ENST00000439027 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
AC011228.1-201ENST00000439027 MEGF6O75095 1541 aa12.7□□□□□ -0.38
AC011228.1-201ENST00000439027 RGPD2P0DJD1 1756 aa12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 MYOM1P52179 1685 aa12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 NSD3Q9BZ95 1437 aa12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 INSRP06213 1382 aa12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 FLT4P35916 1363 aa12.69□□□□□ -0.38
AC011228.1-201ENST00000439027 POLD1P28340 1107 aa12.68□□□□□ -0.38
AC011228.1-201ENST00000439027 CHADLQ6NUI6 762 aa12.68□□□□□ -0.38
AC011228.1-201ENST00000439027 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
AC011228.1-201ENST00000439027 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
AC011228.1-201ENST00000439027 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
AC011228.1-201ENST00000439027 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
AC011228.1-201ENST00000439027 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
AC011228.1-201ENST00000439027 NSD2O96028 1365 aa12.66□□□□□ -0.38
AC011228.1-201ENST00000439027 PAPPAQ13219 1627 aa12.66□□□□□ -0.38
AC011228.1-201ENST00000439027 TNNT2P45379 298 aaPredicted RBP12.65□□□□□ -0.38
AC011228.1-201ENST00000439027 KIF24Q5T7B8 1368 aa12.65□□□□□ -0.38
AC011228.1-201ENST00000439027 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
AC011228.1-201ENST00000439027 KIF20BQ96Q89 1820 aa12.65□□□□□ -0.39
AC011228.1-201ENST00000439027 HAX1O00165 279 aa12.64□□□□□ -0.39
AC011228.1-201ENST00000439027 CYP27B1O15528 508 aa12.64□□□□□ -0.39
AC011228.1-201ENST00000439027 GPR162Q16538 588 aa12.64□□□□□ -0.39
AC011228.1-201ENST00000439027 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
AC011228.1-201ENST00000439027 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
AC011228.1-201ENST00000439027 EIF4G2P78344 907 aaKnown RBP eCLIP12.62□□□□□ -0.39
AC011228.1-201ENST00000439027 COL23A1Q86Y22 540 aaPredicted RBP12.62□□□□□ -0.39
AC011228.1-201ENST00000439027 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
AC011228.1-201ENST00000439027 EYA1Q99502 592 aa12.62□□□□□ -0.39
AC011228.1-201ENST00000439027 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
AC011228.1-201ENST00000439027 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
AC011228.1-201ENST00000439027 PALLDQ8WX93 1383 aa12.61□□□□□ -0.39
AC011228.1-201ENST00000439027 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
AC011228.1-201ENST00000439027 HSPA5P11021 654 aaKnown RBP12.61□□□□□ -0.39
AC011228.1-201ENST00000439027 HMGB2P26583 209 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms