RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SCTRP47872 440 aa7.38□□□□□ -1.23
TRAPPC13-204ENST00000438419 SLFNL1Q499Z3 407 aa7.38□□□□□ -1.23
TRAPPC13-204ENST00000438419 CCDC125Q86Z20 511 aa7.38□□□□□ -1.23
TRAPPC13-204ENST00000438419 RNF135Q8IUD6 432 aa7.38□□□□□ -1.23
TRAPPC13-204ENST00000438419 MEIOBQ8N635 442 aa7.38□□□□□ -1.23
TRAPPC13-204ENST00000438419 CYLDQ9NQC7 956 aa7.38□□□□□ -1.23
TRAPPC13-204ENST00000438419 ZNF777Q9ULD5 760 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-204ENST00000438419 PCDHB11Q9Y5F2 797 aa7.38□□□□□ -1.23
TRAPPC13-204ENST00000438419 VEGFBP49765 207 aa7.37□□□□□ -1.23
TRAPPC13-204ENST00000438419 ERVK-9P63128 1117 aa7.37□□□□□ -1.23
TRAPPC13-204ENST00000438419 KDF1Q8NAX2 398 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC13-204ENST00000438419 GLMNQ92990 594 aa7.37□□□□□ -1.23
TRAPPC13-204ENST00000438419 UCN2Q96RP3 112 aa7.37□□□□□ -1.23
TRAPPC13-204ENST00000438419 GSK3AP49840 483 aa7.36□□□□□ -1.23
TRAPPC13-204ENST00000438419 MRPL14Q6P1L8 145 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-204ENST00000438419 AGBL1Q96MI9 1066 aa7.35□□□□□ -1.23
TRAPPC13-204ENST00000438419 H3BM21 787 aa7.35□□□□□ -1.23
TRAPPC13-204ENST00000438419 CC2D2BQ6DHV5 1058 aa7.35□□□□□ -1.23
TRAPPC13-204ENST00000438419 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
TRAPPC13-204ENST00000438419 PLPP7Q8NBV4 271 aa7.35□□□□□ -1.23
TRAPPC13-204ENST00000438419 DOLKQ9UPQ8 538 aa7.35□□□□□ -1.23
TRAPPC13-204ENST00000438419 ERBB4Q15303 1308 aa7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 ADH1AP07327 375 aa7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 RASSF7Q02833 373 aa7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 LINC00528Q8N1L1 170 aa7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 NFATC2IPQ8NCF5 419 aa7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 CALR3Q96L12 384 aaKnown RBP7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 ZFP42Q96MM3 310 aa7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 PURBQ96QR8 312 aaKnown RBP7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 OSBPL3Q9H4L5 887 aa7.34□□□□□ -1.23
TRAPPC13-204ENST00000438419 SKIP12755 728 aa7.33□□□□□ -1.24
TRAPPC13-204ENST00000438419 MAP7D1Q3KQU3 841 aa7.33□□□□□ -1.24
TRAPPC13-204ENST00000438419 TSEN34Q9BSV6 310 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-204ENST00000438419 RELBQ01201 579 aa7.32□□□□□ -1.24
TRAPPC13-204ENST00000438419 OXLD1Q5BKU9 147 aa7.32□□□□□ -1.24
TRAPPC13-204ENST00000438419 C6orf118Q5T5N4 469 aa7.32□□□□□ -1.24
TRAPPC13-204ENST00000438419 PTGIRP43119 386 aa7.31□□□□□ -1.24
TRAPPC13-204ENST00000438419 ZNF395Q9H8N7 513 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC13-204ENST00000438419 TFIP11Q9UBB9 837 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-204ENST00000438419 USP17L5A8MUK1 530 aa7.3□□□□□ -1.24
TRAPPC13-204ENST00000438419 RNF225M0QZC1 329 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC13-204ENST00000438419 SPINT1O43278 529 aa7.3□□□□□ -1.24
TRAPPC13-204ENST00000438419 ATP9BO43861 1147 aa7.3□□□□□ -1.24
TRAPPC13-204ENST00000438419 BMP2P12643 396 aa7.3□□□□□ -1.24
TRAPPC13-204ENST00000438419 USP4Q13107 963 aa7.3□□□□□ -1.24
TRAPPC13-204ENST00000438419 SCARF1Q14162 830 aa7.3□□□□□ -1.24
TRAPPC13-204ENST00000438419 DEPDC4Q8N2C3 294 aa7.3□□□□□ -1.24
TRAPPC13-204ENST00000438419 ARID3CA6NKF2 412 aa7.29□□□□□ -1.24
TRAPPC13-204ENST00000438419 ATP5J2-PTCD1G3V325 749 aa7.29□□□□□ -1.24
TRAPPC13-204ENST00000438419 UPP2O95045 317 aa7.29□□□□□ -1.24
TRAPPC13-204ENST00000438419 NCOA4Q13772 614 aa7.29□□□□□ -1.24
TRAPPC13-204ENST00000438419 GPAT2Q6NUI2 795 aa7.29□□□□□ -1.24
TRAPPC13-204ENST00000438419 TRIM52Q96A61 297 aa7.29□□□□□ -1.24
TRAPPC13-204ENST00000438419 PPP1R12CQ9BZL4 782 aa7.29□□□□□ -1.24
TRAPPC13-204ENST00000438419 SOS2Q07890 1332 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-204ENST00000438419 PALM3A6NDB9 673 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-204ENST00000438419 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-204ENST00000438419 SUPT5HO00267 1087 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-204ENST00000438419 MYCP01106 439 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-204ENST00000438419 PLEKHM2Q8IWE5 1019 aa7.28□□□□□ -1.24
TRAPPC13-204ENST00000438419 PSMG3-AS1Q96PY0 264 aa7.28□□□□□ -1.24
TRAPPC13-204ENST00000438419 INSM2Q96T92 566 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-204ENST00000438419 A0A1W2PRU2 124 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 USP17L3A6NCW0 530 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 USP17L4A6NCW7 530 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 LZTS3O60299 673 aaPredicted RBP7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 STAU1O95793 577 aaKnown RBP7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 IGHA1P01876 353 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 CTSOP43234 321 aaPredicted RBP7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 USP17L1Q7RTZ2 530 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 CYP2U1Q7Z449 544 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 C1orf115Q9H7X2 142 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 PCDHGA11Q9Y5H2 935 aa7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 MAFBQ9Y5Q3 323 aaPredicted RBP7.27□□□□□ -1.24
TRAPPC13-204ENST00000438419 SOBPA7XYQ1 873 aa7.27□□□□□ -1.25
TRAPPC13-204ENST00000438419 EML3Q32P44 896 aa7.27□□□□□ -1.25
TRAPPC13-204ENST00000438419 CFAP70Q5T0N1 1121 aa7.27□□□□□ -1.25
TRAPPC13-204ENST00000438419 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
TRAPPC13-204ENST00000438419 ESF1Q9H501 851 aaKnown RBP7.27□□□□□ -1.25
TRAPPC13-204ENST00000438419 GNRH1P01148 92 aa7.26□□□□□ -1.25
TRAPPC13-204ENST00000438419 SIRT1Q96EB6 747 aa7.26□□□□□ -1.25
TRAPPC13-204ENST00000438419 ARHGEF10LQ9HCE6 1279 aa7.26□□□□□ -1.25
TRAPPC13-204ENST00000438419 RAB6BQ9NRW1 208 aa7.26□□□□□ -1.25
TRAPPC13-204ENST00000438419 DNMT3LQ9UJW3 386 aa7.26□□□□□ -1.25
TRAPPC13-204ENST00000438419 TTLL8A6PVC2 850 aa7.25□□□□□ -1.25
TRAPPC13-204ENST00000438419 IL2RAP01589 272 aa7.25□□□□□ -1.25
TRAPPC13-204ENST00000438419 SCNN1DP51172 638 aa7.25□□□□□ -1.25
TRAPPC13-204ENST00000438419 CLN3Q13286 438 aa7.25□□□□□ -1.25
TRAPPC13-204ENST00000438419 FOXD4L5Q5VV16 416 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC13-204ENST00000438419 CCDC97Q96F63 343 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC13-204ENST00000438419 NOD1Q9Y239 953 aa7.25□□□□□ -1.25
TRAPPC13-204ENST00000438419 HRH3Q9Y5N1 445 aa7.25□□□□□ -1.25
TRAPPC13-204ENST00000438419 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
TRAPPC13-204ENST00000438419 ZBTB7BO15156 539 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC13-204ENST00000438419 KANK4Q5T7N3 995 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC13-204ENST00000438419 XAGE2Q96GT9 111 aa7.24□□□□□ -1.25
TRAPPC13-204ENST00000438419 ETNK1Q9HBU6 452 aa7.24□□□□□ -1.25
TRAPPC13-204ENST00000438419 SERPINA10Q9UK55 444 aa7.24□□□□□ -1.25
TRAPPC13-204ENST00000438419 FIGNL2A6NMB9 653 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms